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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7N73 | 24218 | 2023-07-04 | 2021-06-09 | 2.9 | 3.46 | 2.99 | 3.3 | 0.006 | 1.27 | 0.0 | 0.06 | 13.02 | 0.00 | 1.850 | 7.76 | 0.00 | 2.6 | 97.4 | 0.0 | 1.31 | 0.71 | 0.85 | 2.86 | 3.3 | 0.003 | 0.87 | 0.0 | 0.04 | 14.40 | 0.00 | 2.044 | 6.12 | 1.09 | 2.1 | 97.9 | 0.0 | 2.37 | 0.34 | 0.69 | 0.84 | 2.37 | 7866 | 1036 | 1 | 0 | 6 | 3 | 0 | logfile |
✔ | 7S8N | 24898 | 2023-07-04 | 2021-09-18 | 2.9 | 2.20 | 2.92 | 2.1 | 0.012 | 0.90 | 0.0 | 0.06 | 13.04 | 0.01 | 2.202 | 4.10 | 0.00 | 5.1 | 94.9 | 0.0 | -0.33 | 0.79 | 0.80 | 3.96 | 2.1 | 0.004 | 0.60 | 0.0 | 0.04 | 15.91 | 0.00 | 2.215 | 3.02 | 1.47 | 3.2 | 96.8 | 0.0 | 0.80 | 1.01 | 0.82 | 0.83 | 2.92 | 8154 | 1090 | 6 | 0 | 1 | 0 | 0 | logfile |
✔ | 6K72 | 9841 | 2023-07-15 | 2019-06-05 | 4.6 | 4.68 | — | 4.6 | 0.006 | 1.30 | 0.0 | 0.07 | 12.85 | 0.01 | 2.168 | 10.56 | 1.37 | 14.0 | 85.9 | 0.1 | -5.39 | 0.74 | 0.72 | — | 4.6 | 0.004 | 0.88 | 0.0 | 0.05 | 13.31 | 0.01 | 2.123 | 22.61 | 0.00 | 13.5 | 86.5 | 0.0 | -3.49 | 0.75 | 0.75 | 0.73 | — | 32731 | 4264 | 14 | 0 | 0 | 0 | 0 | logfile |
✔ | 7VUH | 32128 | 2023-07-05 | 2021-11-02 | 3.22 | 2.19 | — | 1.9 | 0.004 | 0.66 | 0.0 | 0.04 | 13.59 | 0.00 | 2.099 | 13.73 | 0.00 | 6.2 | 93.8 | 0.0 | -1.87 | 0.71 | 0.69 | 2.81 | 1.4 | 0.005 | 0.70 | 0.0 | 0.04 | 15.83 | 0.00 | 2.031 | 14.94 | 0.11 | 6.0 | 94.0 | 0.0 | -1.28 | 0.38 | 0.72 | 0.73 | 2.42 | 8302 | 1042 | 5 | 0 | 1 | 0 | 0 | logfile |
✔ | 7U7N | 26382 | 2023-07-04 | 2022-03-07 | 3.47 | 2.42 | 3.51 | 2.0 | 0.004 | 0.69 | 0.0 | 0.05 | 17.19 | 0.01 | 2.164 | 8.81 | 0.89 | 2.6 | 97.4 | 0.0 | 1.04 | 0.74 | 0.76 | 2.33 | 2.0 | 0.004 | 0.67 | 0.0 | 0.04 | 17.50 | 0.00 | 2.113 | 9.85 | 0.13 | 3.4 | 96.6 | 0.0 | 1.04 | 0.34 | 0.74 | 0.77 | 2.17 | 7284 | 884 | 10 | 0 | 16 | 0 | 0 | logfile |
✘ | 7SCJ | 25036 | 2023-07-05 | 2021-09-28 | 3.4 | 2.31 | 2.97 | 2.0 | 0.004 | 0.60 | 0.0 | 0.05 | 11.12 | 0.01 | 2.200 | 9.22 | 0.00 | 5.7 | 94.3 | 0.0 | -0.25 | 0.75 | 0.72 | 3.17 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 9336 | 1131 | 6 | 2 | 7 | 0 | 0 | logfile |
✔ | 7S8P | 24900 | 2023-07-04 | 2021-09-18 | 2.6 | 2.11 | 2.62 | 1.8 | 0.005 | 0.75 | 0.0 | 0.05 | 12.81 | 0.00 | 2.183 | 3.18 | 0.00 | 5.8 | 94.2 | 0.0 | -2.01 | 0.73 | 0.75 | 4.73 | 1.8 | 0.004 | 0.67 | 0.0 | 0.04 | 15.58 | 0.00 | 2.121 | 3.18 | 2.61 | 5.4 | 94.6 | 0.0 | 0.13 | 0.36 | 0.84 | 0.84 | 3.71 | 8093 | 1089 | 5 | 0 | 1 | 0 | 0 | logfile |
✔ | 8EU8 | 28608 | 2023-07-07 | 2022-10-18 | 3.73 | 2.48 | 3.71 | 2.2 | 0.014 | 1.81 | 0.0 | 0.10 | 13.04 | 0.01 | 1.755 | 3.29 | 0.47 | 5.4 | 94.6 | 0.0 | -0.91 | 0.73 | 0.74 | 3.31 | 2.3 | 0.004 | 0.75 | 0.0 | 0.05 | 16.60 | 0.00 | 2.163 | 9.80 | 0.93 | 4.1 | 95.9 | 0.0 | -0.17 | 0.67 | 0.75 | 0.75 | 1.81 | 14181 | 1692 | 24 | 0 | 63 | 0 | 0 | logfile |
✔ | 7WXW | 32882 | 2023-07-04 | 2022-02-15 | 2.84 | 2.24 | — | 2.1 | 0.005 | 0.78 | 0.0 | 0.05 | 12.89 | 0.01 | 2.256 | 1.29 | 0.00 | 4.4 | 95.6 | 0.0 | -2.04 | 0.75 | 0.75 | 3.34 | 2.0 | 0.004 | 0.60 | 0.0 | 0.04 | 15.75 | 0.00 | 2.196 | 5.30 | 1.58 | 2.8 | 97.2 | 0.0 | 0.32 | 1.17 | 0.78 | 0.78 | 2.66 | 8121 | 1032 | 5 | 0 | 0 | 0 | 0 | logfile |
✘ | 8F2S | 28826 | 2023-07-08 | 2022-11-08 | 2.9 | 3.73 | 2.80 | 3.3 | 0.015 | 0.82 | 0.0 | 0.18 | 15.95 | 0.00 | 2.129 | 3.82 | 0.00 | 4.3 | 95.7 | 0.0 | 0.98 | 0.81 | 0.89 | 4.25 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 17158 | 2023 | 15 | 0 | 38 | 0 | 0 | logfile |
✔ | 6JPQ | 9870 | 2023-07-13 | 2019-03-27 | 4.44 | 5.93 | — | 7.2 | 0.006 | 1.13 | 0.0 | 0.06 | 12.18 | 0.01 | 2.195 | 10.45 | 0.57 | 9.1 | 90.9 | 0.0 | -5.01 | 0.81 | 0.77 | — | 6.0 | 0.004 | 0.82 | 0.0 | 0.05 | 12.94 | 0.01 | 2.056 | 29.36 | 0.00 | 9.2 | 90.8 | 0.0 | -2.14 | 1.80 | 0.83 | 0.81 | — | 27768 | 3462 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 7WRB | 32721 | 2023-07-14 | 2022-01-26 | 2.88 | 3.16 | — | 3.3 | 0.006 | 1.01 | 0.0 | 0.05 | 10.44 | 0.01 | 2.276 | 6.29 | 0.12 | 6.0 | 93.9 | 0.1 | -3.78 | 0.70 | 0.79 | 2.33 | 3.3 | 0.005 | 0.82 | 0.0 | 0.05 | 16.25 | 0.00 | 2.208 | 14.34 | 3.22 | 4.6 | 95.4 | 0.0 | 0.26 | 0.92 | 0.70 | 0.83 | 1.96 | 30376 | 3720 | 8 | 0 | 4 | 0 | 0 | logfile |
✔ | 7WZ7 | 32905 | 2023-07-04 | 2022-02-17 | 2.83 | 2.26 | — | 2.0 | 0.010 | 0.95 | 0.0 | 0.06 | 11.50 | 0.01 | 2.230 | 6.56 | 0.00 | 5.4 | 94.6 | 0.0 | -0.69 | 0.71 | 0.71 | 2.86 | 2.0 | 0.004 | 0.68 | 0.0 | 0.04 | 14.95 | 0.00 | 2.140 | 12.43 | 2.31 | 4.3 | 95.7 | 0.0 | 0.40 | 1.18 | 0.72 | 0.73 | 1.49 | 8676 | 1108 | 5 | 0 | 0 | 0 | 0 | logfile |
✔ | 8SAZ | 40285 | 2023-07-09 | 2023-04-02 | 3.9 | 4.14 | 3.89 | 4.1 | 0.006 | 0.98 | 0.0 | 0.05 | 14.32 | 0.01 | 2.168 | 2.47 | 0.14 | 5.4 | 94.5 | 0.1 | -1.89 | 0.72 | 0.76 | 2.12 | 4.1 | 0.003 | 0.79 | 0.0 | 0.04 | 16.20 | 0.00 | 2.107 | 9.04 | 0.52 | 5.2 | 94.7 | 0.2 | -1.27 | 1.45 | 0.76 | 0.82 | 2.25 | 19960 | 2466 | 24 | 0 | 65 | 0 | 0 | logfile |
✔ | 8SAS | 40278 | 2023-07-09 | 2023-04-01 | 4.0 | 4.28 | 4.02 | 4.2 | 0.008 | 1.18 | 0.0 | 0.06 | 13.80 | 0.01 | 2.002 | 4.09 | 0.00 | 8.7 | 90.9 | 0.4 | -3.16 | 0.69 | 0.72 | — | 4.2 | 0.005 | 0.88 | 0.0 | 0.05 | 16.52 | 0.00 | 2.037 | 14.56 | 0.98 | 8.4 | 91.3 | 0.3 | -2.21 | 1.04 | 0.74 | 0.80 | — | 20028 | 2472 | 24 | 0 | 66 | 0 | 0 | logfile |
✔ | 6E0H | 8948 | 2023-07-05 | 2018-07-06 | 4.05 | 4.18 | — | 4.0 | 0.009 | 1.16 | 0.0 | 0.06 | 11.25 | 0.01 | 2.262 | 5.16 | 0.40 | 7.6 | 92.4 | 0.0 | -5.82 | 0.79 | 0.80 | — | 4.0 | 0.003 | 0.79 | 0.0 | 0.04 | 12.39 | 0.00 | 2.138 | 10.64 | 0.00 | 5.5 | 94.5 | 0.0 | -0.95 | 0.90 | 0.79 | 0.80 | — | 9524 | 1172 | 4 | 0 | 4 | 0 | 0 | logfile |
✔ | 7V9M | 31825 | 2023-07-04 | 2021-08-26 | 3.29 | 2.28 | — | 2.1 | 0.004 | 0.65 | 0.0 | 0.05 | 13.19 | 0.01 | 2.195 | 4.52 | 0.23 | 4.4 | 95.6 | 0.0 | -0.30 | 0.72 | 0.72 | 3.08 | 2.1 | 0.003 | 0.64 | 0.0 | 0.04 | 15.71 | 0.00 | 2.147 | 10.27 | 0.23 | 3.5 | 96.5 | 0.0 | 0.70 | 1.16 | 0.72 | 0.75 | 2.03 | 8138 | 1029 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 7XKF | 33250 | 2023-07-06 | 2022-04-19 | 2.4 | 3.28 | 2.35 | 3.0 | 0.007 | 0.68 | 0.0 | 0.05 | 15.16 | 0.01 | 2.055 | 14.66 | 1.06 | 4.4 | 95.6 | 0.0 | 0.77 | 0.72 | 0.82 | 3.01 | 3.0 | 0.003 | 0.63 | 0.0 | 0.04 | 16.41 | 0.00 | 2.177 | 9.10 | 2.36 | 4.4 | 95.6 | 0.0 | 0.66 | 1.17 | 0.74 | 0.86 | 2.88 | 7961 | 1008 | 5 | 0 | 1 | 0 | 0 | logfile |
✔ | 7T20 | 25607 | 2023-07-10 | 2021-12-02 | 4.7 | 8.85 | — | 7.6 | 0.004 | 0.63 | 0.0 | 0.04 | 11.19 | 0.00 | 2.079 | 7.50 | 3.24 | 2.3 | 97.6 | 0.2 | 0.68 | 0.91 | 0.76 | — | 7.4 | 0.003 | 0.61 | 0.0 | 0.04 | 11.70 | 0.00 | 1.836 | 23.54 | 0.00 | 3.7 | 96.2 | 0.1 | 1.25 | 1.62 | 0.93 | 0.77 | — | 21106 | 2661 | 11 | 10 | 8 | 0 | 0 | logfile |
✔ | 7WGZ | 32493 | 2023-07-10 | 2021-12-29 | 4.5 | 5.31 | — | 4.5 | 0.007 | 0.71 | 0.0 | 0.05 | 12.62 | 0.00 | 1.262 | 7.93 | 0.04 | 5.2 | 94.7 | 0.1 | -0.64 | 0.84 | 0.79 | — | 4.5 | 0.003 | 0.56 | 0.0 | 0.04 | 12.79 | 0.00 | 2.137 | 11.76 | 0.00 | 5.3 | 94.7 | 0.1 | -0.07 | 0.47 | 0.86 | 0.83 | — | 21920 | 2879 | 11 | 0 | 25 | 0 | 0 | logfile |