The table shows a selection of parameters. Activate more columns using
the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✘ | 6MiX | 9132 | 2023-08-25 | 2018-09-20 | 3.6 | 4.57 | — | 14.0 | 0.007 | 1.19 | 0.0 | 0.07 | 16.40 | 0.01 | 2.212 | 9.79 | 2.30 | 14.6 | 85.0 | 0.4 | -5.69 | -0.03 | 0.00 | 0.22 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 43120 | 5348 | 4 | 0 | 0 | 0 | 0 | logfile |
✘ | 5X1G | 6701 | 2023-08-09 | 2017-01-25 | 4.5 | 7.89 | — | 37.0 | 0.008 | 1.42 | 0.0 | 0.05 | 10.05 | 0.01 | 2.345 | 27.78 | 0.00 | 6.9 | 93.1 | 0.0 | -2.75 | 0.00 | 0.01 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 155 | 31 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 5MSH | 3565 | 2023-08-09 | 2017-01-04 | 4.25 | 3.96 | — | 20.0 | 0.014 | 1.56 | 0.0 | 0.07 | 9.56 | 0.01 | 2.323 | 3.07 | 0.00 | 6.1 | 92.5 | 1.5 | -0.93 | 0.01 | 0.02 | — | 3.7 | 0.003 | 0.76 | 0.0 | 0.05 | 12.62 | 0.01 | 2.155 | 14.78 | 0.00 | 6.1 | 93.8 | 0.2 | -0.92 | 2.67 | 0.04 | 0.14 | — | 4287 | 551 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 5M6S | 3451 | 2023-08-09 | 2016-10-25 | 4.8 | 5.27 | — | 6.5 | 0.005 | 0.84 | 0.0 | 0.04 | 27.97 | 0.00 | 2.447 | 23.24 | 44.05 | 7.3 | 89.6 | 3.1 | -5.37 | 0.01 | 0.04 | — | 5.6 | 0.003 | 0.63 | 0.0 | 0.03 | 18.81 | 0.00 | 1.995 | 10.68 | 0.00 | 6.2 | 93.8 | 0.0 | 2.64 | 2.46 | 0.03 | 0.08 | — | 1593 | 98 | 1 | 0 | 0 | 0 | 793 | logfile |
✔ | 7URi | 26713 | 2023-08-09 | 2022-04-22 | 2.6 | 2.67 | 2.95 | 2.6 | 0.009 | 1.37 | 0.0 | 0.12 | 25.77 | 0.01 | 2.201 | 7.31 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.05 | 0.34 | — | 2.6 | 0.008 | 1.44 | 0.0 | 0.07 | 23.84 | 0.01 | 2.072 | 23.68 | 0.00 | 0.0 | 0.0 | 0.0 | — | 2.06 | 0.08 | 0.38 | — | 1905 | 0 | 1 | 90 | 0 | 0 | 0 | logfile |
✔ | 7UR5 | 26705 | 2023-08-09 | 2022-04-21 | 2.6 | 2.89 | 2.82 | 2.9 | 0.008 | 1.48 | 0.0 | 0.11 | 25.09 | 0.01 | 2.204 | 2.44 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.05 | 0.58 | — | 2.9 | 0.005 | 0.83 | 0.0 | 0.04 | 20.54 | 0.01 | 2.027 | 14.87 | 0.00 | 0.0 | 0.0 | 0.0 | — | 1.86 | 0.08 | 0.65 | — | 5709 | 0 | 3 | 270 | 0 | 0 | 0 | logfile |
✔ | 5NV3 | 3699 | 2023-08-24 | 2017-05-03 | 3.39 | 3.43 | — | 3.4 | 0.007 | 1.22 | 2.0 | 0.07 | 14.59 | 0.00 | 2.164 | 2.84 | 0.94 | 5.6 | 94.2 | 0.2 | -2.82 | 0.09 | 0.16 | 3.78 | 3.4 | 0.003 | 0.58 | 0.0 | 0.04 | 16.08 | 0.00 | 1.970 | 8.29 | 0.13 | 2.8 | 97.2 | 0.0 | -0.01 | 1.63 | 0.59 | 0.75 | 3.75 | 37816 | 4768 | 24 | 0 | 16 | 0 | 0 | logfile |
✔ | 7V66 | 31736 | 2023-08-22 | 2021-08-19 | 1.89 | 1.85 | — | 5.2 | 0.006 | 1.02 | 0.0 | 0.07 | 12.14 | 0.01 | 1.929 | 1.89 | 2.07 | 1.9 | 98.0 | 0.0 | 1.97 | 0.09 | 0.05 | 1.38 | 5.1 | 0.004 | 0.76 | 0.0 | 0.04 | 15.44 | 0.00 | 2.197 | 20.43 | 1.35 | 4.9 | 95.1 | 0.0 | 2.55 | 1.19 | 0.16 | 0.14 | -0.14 | 33216 | 4128 | 24 | 0 | 0 | 0 | 0 | logfile |
✔ | 7LJ3 | 23388 | 2023-08-18 | 2021-01-28 | 2.9 | 2.92 | — | 3.4 | 0.005 | 0.72 | 0.0 | 0.04 | 17.12 | 0.00 | 1.041 | 27.61 | 3.30 | 3.6 | 96.0 | 0.4 | 0.29 | 0.10 | 0.23 | -0.14 | 2.9 | 0.003 | 0.60 | 0.0 | 0.03 | 19.24 | 0.00 | 2.017 | 7.67 | 4.04 | 4.5 | 95.4 | 0.2 | 2.58 | 1.42 | 0.22 | 0.79 | 1.76 | 25714 | 2564 | 12 | 225 | 0 | 0 | 0 | logfile |
✔ | 7URM | 26714 | 2023-08-09 | 2022-04-22 | 3.0 | 3.11 | 3.56 | 2.9 | 0.009 | 1.41 | 0.0 | 0.11 | 23.67 | 0.01 | 2.440 | 0.70 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.14 | 0.53 | — | 3.0 | 0.007 | 1.16 | 0.0 | 0.05 | 22.87 | 0.01 | 1.983 | 29.94 | 0.00 | 0.0 | 0.0 | 0.0 | — | 1.70 | 0.15 | 0.54 | — | 1905 | 0 | 1 | 90 | 0 | 0 | 0 | logfile |
✔ | 7XoV | 33360 | 2023-08-10 | 2022-05-01 | 3.0 | 3.23 | 3.00 | 6.0 | 0.019 | 1.98 | 0.0 | 0.09 | 10.84 | 0.02 | 2.322 | 6.84 | 0.90 | 3.0 | 96.9 | 0.1 | 0.50 | 0.14 | 0.02 | 0.62 | 3.3 | 0.003 | 0.92 | 0.0 | 0.04 | 15.30 | 0.00 | 2.179 | 10.94 | 0.90 | 4.0 | 95.9 | 0.1 | 0.04 | 1.71 | 0.48 | 0.61 | 1.04 | 8218 | 1036 | 5 | 0 | 1 | 1 | 0 | logfile |
✔ | 5M5H | 4155 | 2023-08-09 | 2016-10-21 | 4.5 | 2.29 | — | 2.2 | 0.007 | 1.50 | 0.0 | 0.08 | 12.37 | 0.01 | 2.186 | 39.89 | 0.00 | 8.7 | 88.9 | 2.4 | -5.94 | 0.14 | 0.14 | — | 2.1 | 0.004 | 0.89 | 0.0 | 0.05 | 12.67 | 0.01 | 2.275 | 23.84 | 0.00 | 8.7 | 91.3 | 0.0 | -1.45 | 2.20 | 0.15 | 0.14 | — | 1086 | 132 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 6KFK | 9974 | 2023-08-13 | 2019-07-08 | 4.1 | 4.28 | — | 15.0 | 0.015 | 1.99 | 0.0 | 0.08 | 10.94 | 0.01 | 1.444 | 20.13 | 0.00 | 8.2 | 89.5 | 2.2 | -1.03 | 0.14 | 0.06 | — | 4.2 | 0.003 | 0.84 | 0.0 | 0.05 | 12.77 | 0.00 | 2.091 | 18.31 | 0.01 | 7.4 | 91.8 | 0.9 | -0.89 | 2.83 | 0.23 | 0.28 | — | 65076 | 8844 | 22 | 0 | 0 | 0 | 0 | logfile |
✔ | 6FLQ | 4275 | 2023-08-21 | 2018-01-26 | 3.6 | 3.93 | 3.76 | 40.0 | 0.016 | 1.33 | 0.0 | 0.07 | 14.73 | 0.01 | 1.897 | 5.97 | 1.40 | 10.8 | 89.1 | 0.1 | -4.32 | 0.16 | 0.02 | 0.21 | 3.6 | 0.003 | 0.76 | 0.0 | 0.04 | 16.91 | 0.00 | 1.971 | 14.51 | 0.26 | 8.9 | 91.0 | 0.1 | -1.55 | 2.04 | 0.27 | 0.21 | 0.19 | 30201 | 3868 | 10 | 91 | 3 | 0 | 0 | logfile |
✔ | 6RED | 4850 | 2023-08-22 | 2019-04-12 | 3.0 | 3.22 | 3.14 | 27.0 | 0.012 | 1.04 | 0.0 | 0.06 | 14.48 | 0.01 | 2.140 | 5.83 | 0.31 | 4.7 | 95.2 | 0.1 | -3.86 | 0.16 | 0.02 | 0.19 | 27.0 | 0.004 | 0.80 | 0.0 | 0.05 | 15.95 | 0.00 | 1.867 | 19.50 | 2.41 | 5.4 | 94.5 | 0.1 | -0.98 | 1.03 | 0.25 | 0.16 | 0.28 | 33899 | 4503 | 25 | 0 | 10 | 0 | 0 | logfile |
✔ | 7ASK | 11895 | 2023-08-12 | 2020-10-27 | 4.3 | 4.39 | — | 4.3 | 0.028 | 2.99 | 47.0 | 0.22 | 18.83 | 0.02 | 0.766 | 14.21 | 2.58 | 16.8 | 73.5 | 9.7 | -6.06 | 0.17 | 0.51 | — | 4.3 | 0.015 | 1.14 | 2.0 | 0.05 | 15.52 | 0.01 | 1.979 | 19.61 | 0.00 | 18.6 | 79.9 | 1.4 | -3.48 | 1.34 | 0.19 | 0.61 | — | 12285 | 1523 | 1 | 0 | 2 | 0 | 0 | logfile |
✔ | 8D43 | 27173 | 2023-08-10 | 2022-06-01 | 2.88 | 3.12 | 2.94 | 5.9 | 0.004 | 0.84 | 1.0 | 0.06 | 18.27 | 0.01 | 1.371 | 8.43 | 5.48 | 6.5 | 93.5 | 0.0 | -1.48 | 0.17 | -0.02 | 0.37 | 3.2 | 0.004 | 0.84 | 0.0 | 0.05 | 18.51 | 0.01 | 2.058 | 18.77 | 3.10 | 5.2 | 94.7 | 0.1 | -1.45 | 2.71 | 0.41 | 0.35 | 0.56 | 7763 | 962 | 5 | 0 | 6 | 1 | 0 | logfile |
✔ | 7YKS | 33896 | 2023-08-15 | 2022-07-23 | 3.0 | 3.20 | 3.06 | 4.7 | 0.008 | 1.00 | 0.0 | 0.06 | 10.27 | 0.01 | 2.291 | 4.01 | 0.00 | 6.7 | 93.1 | 0.2 | -6.58 | 0.17 | 0.11 | -0.18 | 3.2 | 0.003 | 0.77 | 0.0 | 0.04 | 16.58 | 0.00 | 2.059 | 8.61 | 1.28 | 4.7 | 95.3 | 0.0 | -0.45 | 2.19 | 0.59 | 0.80 | 1.54 | 18984 | 2364 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 6Qi8 | 4552 | 2023-08-13 | 2019-01-18 | 3.75 | 3.92 | — | 10.4 | 0.004 | 0.91 | 0.0 | 0.05 | 16.35 | 0.01 | 1.999 | 4.27 | 0.19 | 5.5 | 94.5 | 0.0 | -5.84 | 0.17 | 0.02 | 0.43 | 9.9 | 0.003 | 0.85 | 0.0 | 0.04 | 17.56 | 0.00 | 2.143 | 15.66 | 0.19 | 7.7 | 92.3 | 0.0 | -2.16 | 1.53 | 0.32 | 0.22 | 0.51 | 14789 | 1907 | 12 | 0 | 6 | 0 | 0 | logfile |
✔ | 6FU8 | 4319 | 2023-08-09 | 2018-02-26 | 3.2 | 4.43 | 2.98 | 3.8 | 0.013 | 2.11 | 2.0 | 0.10 | 20.18 | 0.02 | 2.617 | 1.47 | 2.78 | 11.2 | 86.2 | 2.5 | -3.87 | 0.17 | 0.42 | 2.23 | 4.1 | 0.004 | 0.85 | 0.0 | 0.04 | 15.02 | 0.00 | 2.243 | 16.86 | 0.00 | 11.2 | 87.5 | 1.2 | -1.85 | 3.09 | 0.23 | 0.62 | -0.89 | 1364 | 82 | 1 | 0 | 0 | 0 | 711 | logfile |