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Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 6CAJ | 7442 | 2023-04-27 | 2018-01-31 | 2.8 | 2.84 | — | 4.2 | 0.008 | 0.88 | 0.0 | 0.17 | 9.84 | 0.01 | 1.467 | 5.88 | 0.24 | 4.5 | 95.5 | 0.0 | -3.63 | 0.33 | 0.15 | 2.28 | 2.9 | 0.004 | 0.69 | 0.0 | 0.04 | 16.38 | 0.00 | 2.142 | 11.46 | 2.76 | 5.1 | 94.9 | 0.0 | -0.19 | 1.21 | 0.75 | 0.85 | 2.84 | 24295 | 3210 | 11 | 0 | 1 | 0 | 0 | logfile |
✔ | 7K8D | 22728 | 2023-04-21 | 2020-09-26 | 4.33 | 4.48 | — | 4.7 | 0.004 | 1.12 | 0.0 | 0.06 | 12.53 | 0.01 | 2.205 | 23.61 | 1.86 | 4.3 | 95.7 | 0.0 | -2.98 | 0.33 | 0.40 | — | 4.6 | 0.003 | 0.80 | 0.0 | 0.04 | 13.50 | 0.01 | 2.094 | 15.68 | 0.00 | 4.9 | 95.1 | 0.0 | 0.82 | 1.46 | 0.41 | 0.49 | — | 5529 | 725 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 7TLD | 25988 | 2023-04-26 | 2022-01-18 | 2.89 | 3.35 | — | 3.3 | 0.013 | 1.80 | 0.0 | 0.09 | 13.31 | 0.01 | 2.524 | 0.07 | 0.94 | 5.2 | 94.6 | 0.2 | -1.25 | 0.33 | 0.48 | 3.75 | 3.3 | 0.003 | 0.59 | 0.0 | 0.04 | 15.32 | 0.00 | 2.161 | 5.99 | 1.33 | 3.4 | 96.6 | 0.0 | 0.25 | 0.62 | 0.59 | 0.77 | 3.01 | 22812 | 2916 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 7T2E | 25611 | 2023-04-19 | 2021-12-03 | 2.7 | 3.14 | — | 3.0 | 0.003 | 0.54 | 0.0 | 0.04 | 16.11 | 0.00 | 2.242 | 1.92 | 1.18 | 0.3 | 99.7 | 0.0 | 0.14 | 0.34 | 0.84 | 5.04 | 3.0 | 0.002 | 0.49 | 0.0 | 0.04 | 16.21 | 0.00 | 2.222 | 2.35 | 1.18 | 0.3 | 99.7 | 0.0 | 0.45 | 0.13 | 0.36 | 0.86 | 4.79 | 2390 | 312 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 6W2D | 21525 | 2023-04-28 | 2020-03-05 | 4.0 | 4.10 | — | 4.0 | 0.006 | 0.74 | 0.0 | 0.05 | 13.33 | 0.01 | 1.362 | 15.60 | 5.51 | 5.0 | 94.6 | 0.4 | -2.57 | 0.34 | 0.54 | — | 4.0 | 0.005 | 0.86 | 0.0 | 0.05 | 16.99 | 0.01 | 2.025 | 17.88 | 0.82 | 6.9 | 93.1 | 0.1 | -1.36 | 1.72 | 0.42 | 0.79 | — | 74272 | 9430 | 21 | 0 | 0 | 0 | 0 | logfile |
✔ | 6YBV | 10774 | 2023-04-20 | 2020-03-17 | 3.8 | 3.86 | 4.60 | 3.6 | 0.008 | 1.47 | 0.0 | 0.07 | 17.69 | 0.01 | 2.202 | 9.58 | 6.67 | 6.1 | 93.4 | 0.5 | -2.26 | 0.34 | 0.56 | 1.26 | 3.6 | 0.004 | 0.84 | 0.0 | 0.05 | 18.35 | 0.00 | 2.023 | 19.92 | 0.80 | 11.9 | 87.9 | 0.1 | -2.54 | 3.35 | 0.34 | 0.59 | 0.71 | 6731 | 769 | 5 | 78 | 0 | 0 | 0 | logfile |
✔ | 5L4K | 4002 | 2023-04-29 | 2016-05-25 | 3.9 | 4.00 | — | 4.2 | 0.007 | 0.85 | 3.0 | 0.05 | 16.12 | 0.01 | 1.808 | 5.03 | 3.82 | 11.8 | 85.0 | 3.2 | -6.15 | 0.34 | 0.64 | 0.39 | 4.0 | 0.004 | 0.79 | 0.0 | 0.04 | 17.43 | 0.01 | 1.906 | 18.52 | 0.60 | 9.2 | 90.4 | 0.5 | -1.87 | 1.81 | 0.37 | 0.70 | 0.35 | 79649 | 5000 | 12 | 0 | 0 | 0 | 39990 | logfile |
✔ | 7ADJ | 11727 | 2023-04-21 | 2020-09-15 | 2.8 | 3.02 | 2.79 | 3.0 | 0.014 | 1.99 | 4.0 | 0.11 | 14.68 | 0.01 | 2.562 | 0.51 | 0.18 | 6.9 | 93.1 | 0.0 | -2.18 | 0.34 | 0.70 | 3.50 | 3.0 | 0.003 | 0.64 | 0.0 | 0.04 | 17.18 | 0.00 | 2.131 | 7.52 | 2.57 | 7.9 | 92.1 | 0.0 | -1.24 | 1.53 | 0.40 | 0.77 | 2.99 | 9710 | 613 | 1 | 0 | 0 | 0 | 4790 | logfile |
✔ | 5LY6 | 4118 | 2023-04-20 | 2016-09-24 | 4.5 | 4.72 | — | 4.3 | 0.006 | 1.24 | 0.0 | 0.03 | 24.28 | 0.02 | 1.526 | 94.62 | 36.32 | 20.9 | 74.2 | 4.9 | -5.32 | 0.34 | 0.59 | — | 4.4 | 0.003 | 0.77 | 0.0 | 0.04 | 13.91 | 0.00 | 2.223 | 14.60 | 0.00 | 8.3 | 91.5 | 0.2 | -2.31 | 3.59 | 0.40 | 0.76 | — | 3725 | 471 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 7ELH | 31183 | 2023-04-22 | 2021-04-11 | 3.3 | 3.97 | — | 3.7 | 0.006 | 0.82 | 1.0 | 0.05 | 12.97 | 0.00 | 1.043 | 9.19 | 0.21 | 3.9 | 96.1 | 0.1 | 0.36 | 0.35 | 0.69 | 3.16 | 3.6 | 0.003 | 0.51 | 0.0 | 0.04 | 14.69 | 0.00 | 1.859 | 28.25 | 0.29 | 3.7 | 96.3 | 0.0 | 1.24 | 1.15 | 0.38 | 0.89 | 2.53 | 114995 | 13378 | 27 | 310 | 1 | 0 | 3098 | logfile |
✔ | 6QD2 | 4517 | 2023-04-26 | 2018-12-31 | 4.8 | 4.92 | 5.85 | 4.9 | 0.006 | 0.86 | 0.0 | 0.04 | 9.04 | 0.01 | 2.025 | 6.53 | 0.00 | 11.6 | 88.4 | 0.0 | -4.60 | 0.35 | 0.62 | — | 4.9 | 0.004 | 0.68 | 0.0 | 0.04 | 10.92 | 0.00 | 2.087 | 11.59 | 0.00 | 9.1 | 90.9 | 0.0 | -1.48 | 1.09 | 0.39 | 0.65 | — | 21746 | 1420 | 5 | 0 | 2 | 0 | 11100 | logfile |
✔ | 7ELL | 31184 | 2023-04-21 | 2021-04-12 | 3.8 | 4.24 | — | 3.8 | 0.006 | 0.86 | 1.0 | 0.05 | 14.83 | 0.01 | 1.176 | 17.74 | 0.62 | 8.9 | 90.9 | 0.2 | -2.13 | 0.35 | 0.86 | 1.77 | 3.8 | 0.005 | 0.77 | 0.0 | 0.05 | 15.99 | 0.00 | 2.030 | 12.91 | 0.40 | 4.8 | 95.1 | 0.1 | -0.02 | 1.31 | 0.34 | 0.88 | 1.94 | 60584 | 7917 | 31 | 0 | 10 | 0 | 0 | logfile |
✔ | 6oEE | 20020 | 2023-04-28 | 2019-03-27 | 3.8 | 3.96 | — | 3.8 | 0.008 | 1.19 | 0.0 | 0.06 | 17.19 | 0.01 | 2.159 | 9.17 | 3.57 | 14.9 | 85.1 | 0.0 | -4.60 | 0.35 | 0.74 | 0.83 | 3.8 | 0.003 | 0.79 | 0.0 | 0.04 | 17.76 | 0.00 | 2.249 | 11.89 | 0.67 | 12.7 | 87.3 | 0.0 | -1.07 | 0.97 | 0.35 | 0.75 | 0.82 | 28000 | 3402 | 14 | 0 | 0 | 0 | 0 | logfile |
✔ | 7TUi | 26132 | 2023-04-28 | 2022-02-02 | 2.66 | 2.87 | — | 2.9 | 0.005 | 0.87 | 0.0 | 0.05 | 12.34 | 0.01 | 2.034 | 16.42 | 0.00 | 6.8 | 92.8 | 0.4 | -2.00 | 0.35 | 0.69 | 2.57 | 2.9 | 0.003 | 0.68 | 0.0 | 0.04 | 15.92 | 0.00 | 2.085 | 14.18 | 1.33 | 6.1 | 93.6 | 0.3 | -1.06 | 1.19 | 0.34 | 0.73 | 2.39 | 27380 | 3466 | 2 | 0 | 1 | 0 | 0 | logfile |
✔ | 7JQQ | 22441 | 2023-04-28 | 2020-08-11 | 4.1 | 4.43 | — | 4.3 | 0.004 | 0.88 | 0.0 | 0.04 | 23.12 | 0.01 | 1.379 | 26.31 | 0.00 | 9.7 | 90.3 | 0.0 | -2.31 | 0.35 | 0.57 | — | 4.3 | 0.003 | 0.78 | 0.0 | 0.04 | 22.83 | 0.00 | 1.952 | 22.64 | 0.00 | 9.6 | 90.4 | 0.0 | -2.18 | 0.49 | 0.35 | 0.58 | — | 28416 | 1635 | 15 | 705 | 6 | 0 | 0 | logfile |
✔ | 7XiZ | 33213 | 2023-04-19 | 2022-04-14 | 3.74 | 3.27 | 3.81 | 3.1 | 0.013 | 1.11 | 0.0 | 0.06 | 17.48 | 0.01 | 2.386 | 4.94 | 0.00 | 12.8 | 86.4 | 0.8 | -3.37 | 0.35 | 0.71 | 1.78 | 3.1 | 0.004 | 0.81 | 0.0 | 0.05 | 17.83 | 0.01 | 2.218 | 16.22 | 1.70 | 16.6 | 82.6 | 0.8 | -3.61 | 1.54 | 0.37 | 0.74 | 1.40 | 2161 | 267 | 1 | 0 | 2 | 0 | 0 | logfile |
✔ | 5U1D | 8482 | 2023-04-20 | 2016-11-28 | 3.97 | 4.06 | — | 4.3 | 0.007 | 1.17 | 0.0 | 0.05 | 12.05 | 0.00 | 2.452 | 0.07 | 0.84 | 5.7 | 94.1 | 0.2 | -2.16 | 0.36 | 0.48 | 1.30 | 4.1 | 0.004 | 0.78 | 0.0 | 0.04 | 15.89 | 0.00 | 2.058 | 14.10 | 0.51 | 4.7 | 95.2 | 0.1 | 0.93 | 1.07 | 0.52 | 0.75 | 1.63 | 7815 | 1168 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 6HD5 | 0201 | 2023-04-21 | 2018-08-17 | 4.8 | 6.01 | — | 5.9 | 0.001 | 0.40 | 0.0 | 0.03 | 8.70 | 0.00 | 2.289 | 4.36 | 0.10 | 10.5 | 88.4 | 1.1 | -1.81 | 0.36 | 0.32 | — | 5.9 | 0.004 | 0.81 | 0.0 | 0.04 | 11.92 | 0.01 | 2.072 | 21.86 | 0.00 | 6.4 | 93.5 | 0.1 | -0.40 | 2.04 | 0.46 | 0.56 | — | 9707 | 1234 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 5A6E | 3062 | 2023-04-22 | 2015-06-25 | 4.5 | 6.76 | — | 5.1 | 0.010 | 3.73 | 0.0 | 0.05 | 15.55 | 0.01 | 2.112 | 8.77 | 3.19 | 11.1 | 88.8 | 0.2 | -5.00 | 0.36 | 0.56 | — | 4.8 | 0.004 | 0.60 | 0.0 | 0.03 | 10.41 | 0.00 | 2.080 | 11.78 | 0.00 | 5.3 | 94.7 | 0.0 | -0.72 | 1.45 | 0.40 | 0.73 | — | 11093 | 634 | 4 | 0 | 182 | 0 | 5102 | logfile |
✔ | 5A63 | 3061 | 2023-04-21 | 2015-06-24 | 3.4 | 3.50 | 3.42 | 3.5 | 0.010 | 1.69 | 8.0 | 0.11 | 19.07 | 0.01 | 2.079 | 39.51 | 13.74 | 6.4 | 91.5 | 2.1 | -0.17 | 0.36 | 0.40 | 2.09 | 3.5 | 0.003 | 0.76 | 0.0 | 0.04 | 17.76 | 0.00 | 2.217 | 12.14 | 1.05 | 5.5 | 94.1 | 0.3 | 0.06 | 3.24 | 0.62 | 0.82 | 1.80 | 10003 | 1223 | 13 | 0 | 22 | 0 | 0 | logfile |