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Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7JGF | 22325 | 2023-07-03 | 2020-07-19 | 4.69 | 4.81 | — | 4.8 | 0.002 | 0.62 | 0.0 | 0.04 | 13.16 | 0.01 | 2.109 | 26.74 | 0.41 | 4.6 | 95.4 | 0.0 | -0.87 | 0.39 | 0.43 | — | 4.8 | 0.002 | 0.47 | 0.0 | 0.04 | 13.18 | 0.00 | 2.190 | 46.28 | 0.41 | 4.8 | 95.2 | 0.0 | 1.10 | 0.62 | 0.41 | 0.45 | — | 4477 | 532 | 1 | 0 | 0 | 0 | 30 | logfile |
✔ | 6S6L | 10103 | 2023-07-06 | 2019-07-03 | 3.1 | 2.99 | 2.95 | 2.9 | 0.014 | 1.12 | 0.0 | 0.07 | 9.31 | 0.01 | 2.263 | 5.39 | 0.16 | 5.3 | 94.7 | 0.0 | -2.85 | 0.39 | 0.65 | 3.67 | 2.9 | 0.002 | 0.59 | 0.0 | 0.04 | 12.12 | 0.01 | 2.158 | 8.90 | 0.24 | 3.5 | 96.5 | 0.0 | -0.82 | 0.55 | 0.40 | 0.66 | 2.99 | 11587 | 1510 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 6DU8 | 8912 | 2023-07-06 | 2018-06-20 | 3.11 | 3.84 | — | 3.8 | 0.007 | 1.14 | 0.0 | 0.08 | 12.57 | 0.01 | 2.046 | 7.99 | 0.89 | 8.8 | 91.2 | 0.0 | -4.81 | 0.39 | 0.59 | 3.01 | 3.8 | 0.004 | 0.82 | 0.0 | 0.05 | 15.41 | 0.00 | 2.067 | 12.36 | 0.07 | 9.7 | 90.3 | 0.0 | -1.96 | 0.58 | 0.41 | 0.62 | 2.19 | 13380 | 1684 | 8 | 0 | 4 | 0 | 0 | logfile |
✔ | 6QPi | 4614 | 2023-07-03 | 2019-02-14 | 3.3 | 3.37 | 2.73 | 3.4 | 0.005 | 0.70 | 0.0 | 0.04 | 6.59 | 0.01 | 2.432 | 2.09 | 0.00 | 1.4 | 98.6 | 0.0 | -3.02 | 0.39 | 0.62 | — | 3.3 | 0.003 | 0.53 | 0.0 | 0.04 | 5.28 | 0.00 | 2.448 | 1.19 | 0.00 | 2.6 | 97.4 | 0.0 | 1.11 | 0.59 | 0.41 | 0.64 | — | 2288 | 462 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 5oPT | 3844 | 2023-07-14 | 2017-08-10 | 4.0 | 4.15 | — | 4.1 | 0.017 | 2.04 | 31.0 | 0.13 | 16.39 | 0.02 | 2.216 | 0.79 | 0.41 | 8.5 | 89.6 | 1.9 | -4.21 | 0.40 | 0.58 | — | 4.1 | 0.004 | 0.77 | 0.0 | 0.04 | 18.17 | 0.01 | 2.023 | 19.21 | 0.88 | 9.1 | 90.6 | 0.3 | -2.43 | 1.90 | 0.46 | 0.74 | — | 82219 | 4903 | 35 | 2022 | 0 | 0 | 0 | logfile |
✔ | 6X16 | 21990 | 2023-07-05 | 2020-05-18 | 3.39 | 3.34 | — | 3.4 | 0.006 | 0.99 | 0.0 | 0.05 | 14.76 | 0.01 | 2.322 | 3.97 | 0.31 | 4.8 | 95.2 | 0.0 | -3.86 | 0.40 | 0.73 | 1.79 | 3.4 | 0.003 | 0.57 | 0.0 | 0.04 | 15.13 | 0.00 | 2.199 | 8.19 | 0.10 | 3.5 | 96.5 | 0.0 | 0.74 | 1.12 | 0.45 | 0.77 | 1.41 | 9438 | 1248 | 6 | 0 | 6 | 0 | 0 | logfile |
✘ | 6QoZ | 4610 | 2023-07-09 | 2019-02-13 | 3.4 | 3.65 | 3.13 | 3.5 | 0.011 | 1.46 | 4.0 | 0.09 | 15.40 | 0.01 | 1.243 | 4.20 | 5.13 | 6.0 | 93.1 | 0.9 | -3.28 | 0.40 | 0.62 | 0.09 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 17987 | 2307 | 9 | 0 | 0 | 0 | 0 | logfile |
✔ | 7KF5 | 22843 | 2023-07-19 | 2020-10-13 | 3.2 | 3.46 | — | 3.6 | 0.003 | 0.55 | 0.0 | 0.04 | 15.93 | 0.02 | 2.007 | 9.13 | 0.24 | 4.2 | 95.8 | 0.0 | -2.33 | 0.40 | 0.71 | 0.91 | 3.5 | 0.004 | 0.64 | 0.0 | 0.04 | 17.66 | 0.00 | 2.030 | 9.30 | 0.47 | 4.8 | 95.2 | 0.0 | -0.05 | 1.41 | 0.39 | 0.76 | 1.73 | 48069 | 3075 | 3 | 0 | 0 | 0 | 24414 | logfile |
✔ | 7S1Y | 24812 | 2023-07-04 | 2021-09-02 | 3.6 | 3.90 | — | 3.9 | 0.005 | 0.77 | 2.0 | 0.04 | 12.89 | 0.01 | 1.566 | 12.97 | 0.00 | 7.2 | 92.6 | 0.2 | -0.33 | 0.40 | 0.55 | 0.33 | 3.9 | 0.003 | 0.72 | 2.0 | 0.04 | 14.86 | 0.00 | 2.189 | 13.61 | 0.52 | 6.9 | 92.9 | 0.2 | -0.45 | 0.58 | 0.51 | 0.64 | 0.51 | 6580 | 948 | 4 | 0 | 6 | 0 | 0 | logfile |
✔ | 7UBB | 26437 | 2023-07-04 | 2022-03-14 | 4.5 | 5.42 | 4.95 | 5.3 | 0.002 | 0.68 | 0.0 | 0.04 | 14.32 | 0.00 | 2.231 | 14.38 | 0.00 | 0.9 | 99.1 | 0.0 | -1.04 | 0.40 | 0.59 | — | 5.3 | 0.002 | 0.60 | 0.0 | 0.04 | 14.50 | 0.00 | 2.283 | 8.83 | 0.00 | 1.8 | 98.2 | 0.0 | -1.07 | 0.80 | 0.37 | 0.54 | — | 7448 | 896 | 8 | 0 | 0 | 0 | 0 | logfile |
✔ | 6ZMS | 11300 | 2023-07-06 | 2020-07-03 | 3.4 | 3.78 | — | 3.8 | 0.019 | 1.98 | 3.0 | 0.10 | 14.13 | 0.01 | 2.427 | 0.32 | 2.12 | 5.6 | 91.4 | 3.0 | -2.88 | 0.40 | 0.72 | 1.84 | 3.7 | 0.004 | 0.64 | 0.0 | 0.04 | 15.70 | 0.00 | 2.031 | 5.57 | 0.14 | 6.2 | 93.4 | 0.4 | -1.93 | 1.76 | 0.35 | 0.84 | 3.57 | 12570 | 818 | 4 | 0 | 0 | 0 | 6173 | logfile |
✔ | 5V6P | 8637 | 2023-07-05 | 2017-03-17 | 4.1 | 4.04 | — | 4.1 | 0.015 | 1.37 | 0.0 | 0.08 | 9.65 | 0.01 | 2.463 | 1.41 | 0.00 | 2.6 | 97.0 | 0.4 | 0.18 | 0.40 | 0.58 | — | 4.0 | 0.003 | 0.63 | 0.0 | 0.03 | 12.99 | 0.00 | 2.171 | 12.95 | 0.00 | 3.0 | 97.0 | 0.0 | 2.68 | 1.65 | 0.41 | 0.66 | — | 9194 | 540 | 2 | 0 | 0 | 0 | 4676 | logfile |
✔ | 7FBi | 31515 | 2023-07-04 | 2021-07-10 | 3.9 | 4.51 | — | 4.4 | 0.007 | 1.18 | 3.0 | 0.07 | 15.51 | 0.01 | 2.095 | 10.67 | 0.35 | 14.6 | 85.3 | 0.1 | -5.16 | 0.40 | 0.79 | 1.90 | 4.4 | 0.005 | 0.86 | 0.0 | 0.05 | 16.65 | 0.00 | 2.125 | 18.48 | 0.81 | 14.3 | 85.7 | 0.0 | -3.69 | 0.65 | 0.41 | 0.79 | 1.98 | 7777 | 1005 | 5 | 0 | 0 | 0 | 0 | logfile |
✔ | 7K8A | 22724 | 2023-07-06 | 2020-09-26 | 3.65 | 3.57 | — | 3.7 | 0.004 | 0.92 | 1.0 | 0.05 | 13.38 | 0.01 | 2.226 | 16.09 | 0.17 | 6.4 | 93.6 | 0.0 | -1.30 | 0.40 | 0.55 | 0.67 | 3.7 | 0.003 | 0.78 | 0.0 | 0.04 | 15.86 | 0.01 | 2.225 | 15.74 | 0.34 | 4.6 | 95.3 | 0.1 | -0.56 | 0.46 | 0.42 | 0.55 | 0.22 | 5513 | 723 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 7N5G | 24189 | 2023-07-03 | 2021-06-05 | 2.4 | 2.16 | 2.42 | 1.5 | 0.022 | 1.51 | 0.0 | 0.09 | 10.57 | 0.01 | 2.386 | 0.17 | 0.00 | 0.8 | 99.2 | 0.0 | 1.84 | 0.40 | 0.79 | 3.64 | 1.5 | 0.003 | 0.57 | 0.0 | 0.04 | 16.52 | 0.00 | 2.220 | 4.78 | 2.61 | 1.4 | 98.6 | 0.0 | 2.92 | 1.20 | 0.39 | 0.80 | 2.57 | 2926 | 371 | 1 | 0 | 1 | 0 | 0 | logfile |
✔ | 6X0V | 21985 | 2023-07-03 | 2020-05-17 | 4.5 | 4.37 | — | 4.4 | 0.003 | 0.62 | 1.0 | 0.04 | 11.58 | 0.00 | 2.285 | 15.16 | 4.48 | 3.5 | 96.0 | 0.5 | -2.45 | 0.40 | 0.74 | — | 4.4 | 0.002 | 0.49 | 0.0 | 0.04 | 12.98 | 0.00 | 2.224 | 17.83 | 0.00 | 5.0 | 95.0 | 0.0 | 2.29 | 1.20 | 0.40 | 0.76 | — | 1384 | 211 | 4 | 0 | 0 | 0 | 62 | logfile |
✘ | 7RL5 | 24516 | 2023-07-11 | 2021-07-23 | 3.8 | 3.61 | — | 3.8 | 0.013 | 2.04 | 24.0 | 0.11 | 16.71 | 0.02 | 0.524 | 3.05 | 2.05 | 3.3 | 96.3 | 0.4 | -1.86 | 0.40 | 0.52 | 2.12 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 106032 | 6708 | 24 | 0 | 24 | 0 | 52716 | logfile |
✔ | 6MLU | 9146 | 2023-07-03 | 2018-09-28 | 4.0 | 4.03 | — | 4.0 | 0.005 | 1.05 | 0.0 | 0.06 | 9.86 | 0.01 | 2.406 | 5.97 | 0.69 | 10.6 | 89.4 | 0.0 | -4.38 | 0.40 | 0.78 | — | 4.0 | 0.005 | 1.16 | 0.0 | 0.06 | 17.79 | 0.01 | 2.194 | 31.82 | 1.39 | 15.2 | 84.8 | 0.0 | -2.34 | 3.45 | 0.43 | 0.76 | — | 2516 | 306 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 7RL0 | 24512 | 2023-07-11 | 2021-07-22 | 2.8 | 2.88 | — | 2.9 | 0.014 | 2.04 | 48.0 | 0.11 | 14.56 | 0.02 | 1.912 | 0.47 | 1.08 | 2.5 | 97.3 | 0.2 | -1.35 | 0.40 | 0.48 | 2.19 | 2.9 | 0.009 | 0.80 | 0.0 | 0.05 | 17.05 | 0.01 | 1.762 | 12.73 | 2.68 | 3.8 | 96.0 | 0.2 | 0.07 | 1.16 | 0.52 | 0.69 | 2.15 | 106080 | 6708 | 24 | 0 | 48 | 0 | 52716 | logfile |
✔ | 8B70 | 15894 | 2023-07-05 | 2022-09-28 | 3.3 | 2.85 | 3.11 | 3.3 | 0.011 | 1.45 | 0.0 | 0.06 | 15.75 | 0.00 | 2.148 | 8.20 | 0.84 | 4.8 | 95.2 | 0.0 | 1.55 | 0.40 | 0.68 | 1.87 | 3.2 | 0.003 | 0.76 | 0.0 | 0.04 | 16.60 | 0.00 | 2.223 | 7.47 | 0.00 | 3.9 | 96.1 | 0.0 | 1.50 | 0.93 | 0.61 | 0.86 | 1.56 | 9258 | 1144 | 4 | 0 | 12 | 0 | 0 | logfile |