The table shows a selection of parameters. Activate more columns using
the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 6DLU | 7957 | 2024-03-15 | 2018-06-02 | 3.75 | 3.84 | — | 3.8 | 0.009 | 0.95 | 0.0 | 0.05 | 11.14 | 0.00 | 1.944 | 12.48 | 0.23 | 5.7 | 94.3 | 0.0 | -2.78 | 0.31 | 0.77 | 1.09 | 3.7 | 0.003 | 0.65 | 0.0 | 0.04 | 14.25 | 0.00 | 1.958 | 9.11 | 1.44 | 4.4 | 95.6 | 0.0 | 0.01 | 2.17 | 0.32 | 0.82 | 1.56 | 11991 | 1481 | 4 | 0 | 4 | 0 | 0 | logfile |
✔ | 7UAK | 26427 | 2024-03-10 | 2022-03-13 | 3.38 | 3.45 | 2.13 | 3.6 | 0.003 | 0.70 | 0.0 | 0.05 | 13.75 | 0.00 | 2.407 | 13.48 | 0.00 | 14.4 | 85.6 | 0.0 | -2.82 | 0.31 | 0.67 | 2.41 | 3.6 | 0.004 | 0.71 | 0.0 | 0.05 | 17.15 | 0.00 | 2.293 | 6.45 | 4.92 | 19.2 | 80.8 | 0.0 | -3.49 | 0.62 | 0.36 | 0.76 | 1.84 | 2586 | 372 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 8QCP | 18331 | 2024-03-11 | 2023-08-28 | 3.21 | 3.22 | 3.18 | 3.3 | 0.011 | 1.86 | 1.0 | 0.09 | 11.52 | 0.01 | 2.543 | 0.00 | 0.00 | 7.5 | 92.5 | 0.0 | -2.03 | 0.31 | 0.78 | 5.53 | 3.3 | 0.004 | 0.61 | 0.0 | 0.05 | 16.24 | 0.00 | 2.181 | 2.00 | 2.04 | 5.4 | 94.6 | 0.0 | -2.13 | 0.96 | 0.35 | 0.86 | 5.39 | 7002 | 453 | 6 | 0 | 0 | 0 | 3567 | logfile |
✔ | 3J7A | 2660 | 2024-03-15 | 2014-06-03 | 3.2 | 3.24 | 3.33 | 3.2 | 0.008 | 1.39 | 49.0 | 0.10 | 24.28 | 0.01 | 1.715 | 4.56 | 15.41 | 10.5 | 85.4 | 4.2 | -2.49 | 0.31 | 0.55 | -0.02 | 3.2 | 0.005 | 0.77 | 0.0 | 0.04 | 23.17 | 0.01 | 1.822 | 18.07 | 6.12 | 9.2 | 89.6 | 1.2 | -2.23 | 2.69 | 0.40 | 0.78 | 0.95 | 68866 | 4106 | 35 | 1682 | 69 | 0 | 0 | logfile |
✔ | 8Q9F | 18279 | 2024-03-11 | 2023-08-20 | 1.91 | 1.89 | 1.88 | 1.9 | 0.011 | 1.78 | 0.0 | 0.09 | 10.30 | 0.01 | 2.515 | 0.00 | 0.00 | 0.2 | 99.8 | 0.0 | -2.15 | 0.31 | 0.73 | 7.64 | 1.9 | 0.003 | 0.62 | 0.0 | 0.05 | 14.82 | 0.00 | 2.068 | 3.45 | 0.56 | 2.2 | 97.8 | 0.0 | -2.05 | 1.20 | 0.43 | 0.86 | 7.13 | 6390 | 414 | 6 | 0 | 0 | 0 | 3258 | logfile |
✔ | 8F0U | 28781 | 2024-03-16 | 2022-11-04 | 3.1 | 3.37 | 3.22 | 3.6 | 0.031 | 1.77 | 0.0 | 0.13 | 9.86 | 0.01 | 2.388 | 0.67 | 0.00 | 0.8 | 99.2 | 0.0 | 0.72 | 0.31 | 0.31 | 0.91 | 3.5 | 0.005 | 0.69 | 0.0 | 0.05 | 14.09 | 0.00 | 1.903 | 8.39 | 1.73 | 6.6 | 93.4 | 0.0 | -1.02 | 2.15 | 0.53 | 0.67 | 1.75 | 72240 | 4848 | 36 | 0 | 0 | 0 | 36756 | logfile |
✔ | 6HRE | 0259 | 2024-03-10 | 2018-09-26 | 3.2 | 2.74 | 2.87 | 3.3 | 0.019 | 1.47 | 0.0 | 0.11 | 13.34 | 0.01 | 2.474 | 6.01 | 0.00 | 12.0 | 88.0 | 0.0 | -4.17 | 0.32 | 0.80 | 4.40 | 3.2 | 0.003 | 0.75 | 0.0 | 0.05 | 17.11 | 0.00 | 2.256 | 6.43 | 3.23 | 5.1 | 94.9 | 0.0 | -3.22 | 0.76 | 0.28 | 0.77 | 3.85 | 3522 | 462 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 8Q9o | 18287 | 2024-03-11 | 2023-08-20 | 3.1 | 3.14 | 2.95 | 3.1 | 0.012 | 1.87 | 0.0 | 0.09 | 11.25 | 0.01 | 2.518 | 0.28 | 3.03 | 3.0 | 97.0 | 0.0 | -1.40 | 0.32 | 0.80 | 5.39 | 3.1 | 0.003 | 0.55 | 0.0 | 0.05 | 13.69 | 0.00 | 2.038 | 4.27 | 0.51 | 2.5 | 97.5 | 0.0 | -1.18 | 3.52 | 0.32 | 0.82 | 5.81 | 7032 | 450 | 6 | 0 | 0 | 0 | 3588 | logfile |
✔ | 7RTo | 24685 | 2024-03-11 | 2021-08-13 | 3.8 | 3.83 | — | 3.8 | 0.004 | 0.82 | 0.0 | 0.05 | 14.32 | 0.00 | 2.200 | 8.55 | 0.16 | 5.6 | 94.4 | 0.0 | 1.09 | 0.32 | 0.76 | 2.41 | 3.8 | 0.003 | 0.64 | 0.0 | 0.04 | 16.64 | 0.00 | 2.244 | 7.52 | 2.95 | 4.9 | 95.1 | 0.0 | 1.63 | 0.52 | 0.33 | 0.78 | 1.65 | 6607 | 888 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 8Q8D | 18251 | 2024-03-11 | 2023-08-18 | 3.04 | 2.88 | 2.87 | 3.0 | 0.011 | 1.85 | 2.0 | 0.08 | 13.26 | 0.01 | 2.504 | 0.00 | 0.00 | 2.9 | 97.1 | 0.0 | -1.65 | 0.32 | 0.75 | 5.97 | 2.9 | 0.004 | 0.56 | 0.0 | 0.05 | 16.08 | 0.00 | 2.423 | 1.13 | 2.02 | 1.8 | 98.2 | 0.0 | -1.48 | 1.53 | 0.40 | 0.87 | 5.93 | 7074 | 456 | 6 | 0 | 0 | 0 | 3606 | logfile |
✔ | 8oRE | 17121 | 2024-03-10 | 2023-04-13 | 2.5 | 2.67 | 2.44 | 2.7 | 0.011 | 2.09 | 7.0 | 0.14 | 10.93 | 0.01 | 2.570 | 0.00 | 0.00 | 8.0 | 92.0 | 0.0 | -2.10 | 0.32 | 0.74 | 5.29 | 2.7 | 0.003 | 0.63 | 0.0 | 0.05 | 17.54 | 0.00 | 2.163 | 2.49 | 1.99 | 6.7 | 93.3 | 0.0 | -1.70 | 3.45 | 0.37 | 0.81 | 4.37 | 3615 | 231 | 3 | 0 | 0 | 0 | 1845 | logfile |
✔ | 8FXH | 29533 | 2024-03-21 | 2023-01-24 | 2.8 | 2.94 | 2.88 | 4.0 | 0.006 | 1.37 | 50.0 | 0.10 | 17.25 | 0.01 | 2.235 | 6.73 | 1.19 | 7.8 | 91.8 | 0.4 | -1.03 | 0.32 | 0.19 | 0.18 | 2.9 | 0.003 | 0.73 | 0.0 | 0.05 | 18.05 | 0.01 | 2.050 | 6.85 | 2.04 | 8.1 | 91.6 | 0.3 | -1.14 | 1.88 | 0.76 | 0.85 | 1.88 | 30228 | 3786 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 6XTB | 10618 | 2024-03-10 | 2020-01-15 | 4.3 | 4.32 | — | 3.9 | 0.006 | 1.17 | 0.0 | 0.07 | 8.68 | 0.00 | 2.369 | 3.00 | 0.00 | 15.6 | 84.4 | 0.0 | -4.66 | 0.32 | 0.43 | — | 4.1 | 0.005 | 1.12 | 0.0 | 0.05 | 9.13 | 0.00 | 2.119 | 10.22 | 0.00 | 25.1 | 74.9 | 0.0 | -5.72 | 2.48 | 0.34 | 0.65 | — | 1161 | 235 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 6R4R | 4727 | 2024-03-10 | 2019-03-23 | 3.4 | 3.01 | 1.77 | 3.8 | 0.008 | 1.43 | 0.0 | 0.08 | 10.87 | 0.01 | 2.308 | 6.73 | 0.00 | 12.0 | 88.0 | 0.0 | -5.16 | 0.32 | 0.64 | 5.08 | 3.6 | 0.005 | 0.82 | 0.0 | 0.05 | 16.86 | 0.00 | 2.092 | 17.18 | 6.35 | 9.1 | 90.9 | 0.0 | -4.83 | 1.37 | 0.32 | 0.68 | 4.07 | 4312 | 539 | 7 | 0 | 0 | 0 | 0 | logfile |
✔ | 7ZFW | 14704 | 2024-03-15 | 2022-04-01 | 3.8 | 4.62 | 3.46 | 3.0 | 0.006 | 0.83 | 0.0 | 0.05 | 26.57 | 0.03 | 2.266 | 2.77 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.32 | 0.81 | — | 3.1 | 0.009 | 0.93 | 0.0 | 0.05 | 27.81 | 0.01 | 1.930 | 40.88 | 0.00 | 0.0 | 0.0 | 0.0 | — | 3.56 | 0.33 | 0.85 | — | 13188 | 0 | 1 | 615 | 0 | 0 | 0 | logfile |
✔ | 7K23 | 22641 | 2024-03-18 | 2020-09-08 | 3.3 | 3.44 | 3.16 | 3.4 | 0.007 | 0.81 | 0.0 | 0.05 | 17.18 | 0.00 | 1.620 | 19.51 | 5.40 | 9.3 | 90.5 | 0.2 | -3.86 | 0.32 | 0.62 | 2.33 | 3.4 | 0.004 | 0.69 | 0.0 | 0.05 | 17.42 | 0.00 | 2.077 | 9.29 | 4.25 | 8.7 | 91.1 | 0.1 | -1.74 | 1.65 | 0.41 | 0.85 | 2.77 | 21923 | 2781 | 15 | 0 | 0 | 0 | 0 | logfile |
✔ | 8Q7M | 18224 | 2024-03-10 | 2023-08-16 | 3.26 | 3.16 | 3.21 | 3.3 | 0.011 | 1.96 | 4.0 | 0.11 | 11.70 | 0.01 | 2.490 | 0.38 | 0.17 | 3.1 | 96.9 | 0.0 | -1.88 | 0.32 | 0.70 | 3.84 | 3.2 | 0.006 | 0.76 | 0.0 | 0.05 | 15.05 | 0.00 | 2.219 | 6.33 | 1.88 | 1.8 | 98.2 | 0.0 | -1.83 | 0.84 | 0.36 | 0.87 | 4.15 | 5109 | 669 | 9 | 0 | 0 | 0 | 0 | logfile |
✔ | 7EGB | 31111 | 2024-03-11 | 2021-03-24 | 3.3 | 3.51 | — | 34.0 | 0.008 | 1.11 | 62.0 | 0.07 | 15.49 | 0.01 | 1.322 | 21.13 | 3.22 | 7.3 | 91.9 | 0.8 | -3.64 | 0.32 | 0.02 | 0.13 | 10.0 | 0.004 | 0.83 | 3.0 | 0.05 | 16.74 | 0.01 | 1.659 | 17.27 | 2.30 | 6.4 | 93.5 | 0.2 | -0.97 | 1.04 | 0.41 | 0.18 | 0.03 | 113098 | 13887 | 63 | 138 | 18 | 0 | 0 | logfile |
✔ | 8TiB | 41283 | 2024-03-10 | 2023-07-19 | 3.47 | 3.73 | 3.31 | 3.7 | 0.003 | 0.62 | 0.0 | 0.05 | 16.69 | 0.00 | 2.328 | 7.86 | 0.34 | 6.2 | 93.8 | 0.0 | -1.60 | 0.32 | 0.87 | 1.51 | 3.7 | 0.002 | 0.47 | 0.0 | 0.04 | 16.66 | 0.00 | 2.289 | 5.67 | 5.10 | 5.7 | 94.1 | 0.3 | -0.88 | 0.28 | 0.32 | 0.87 | 1.53 | 2667 | 393 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 5M3L | 3434 | 2024-03-17 | 2016-10-15 | 3.8 | 2.49 | — | 3.8 | 0.013 | 1.53 | 7.0 | 0.08 | 12.48 | 0.01 | 1.442 | 10.31 | 0.59 | 7.4 | 91.5 | 1.1 | -4.86 | 0.32 | 0.76 | 2.04 | 3.6 | 0.004 | 0.77 | 0.0 | 0.04 | 17.18 | 0.00 | 2.037 | 11.71 | 4.26 | 5.2 | 94.6 | 0.2 | -0.57 | 0.86 | 0.33 | 0.76 | 1.43 | 19007 | 2394 | 27 | 0 | 12 | 0 | 0 | logfile |