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Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 8D9N | 27267 | 2024-03-11 | 2022-06-10 | 4.4 | 4.74 | 3.88 | 34.0 | 0.003 | 0.60 | 0.0 | 0.04 | 13.21 | 0.00 | 2.107 | 2.77 | 0.38 | 5.8 | 94.2 | 0.0 | -0.81 | 0.28 | -0.07 | — | 20.0 | 0.002 | 0.66 | 0.0 | 0.04 | 13.37 | 0.00 | 2.199 | 4.56 | 0.00 | 5.3 | 94.7 | 0.0 | 0.51 | 0.56 | 0.36 | -0.05 | — | 7186 | 902 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 8D43 | 27173 | 2024-03-11 | 2022-06-01 | 2.88 | 3.12 | 2.94 | 5.9 | 0.004 | 0.84 | 1.0 | 0.06 | 19.69 | 0.01 | 1.371 | 8.43 | 5.48 | 6.5 | 93.5 | 0.0 | -1.48 | 0.17 | -0.02 | 0.37 | 3.1 | 0.005 | 0.96 | 0.0 | 0.05 | 18.05 | 0.01 | 2.138 | 24.30 | 3.34 | 9.0 | 90.8 | 0.2 | -1.78 | 2.71 | 0.42 | 0.37 | 0.91 | 7763 | 962 | 5 | 0 | 6 | 1 | 0 | logfile |
✔ | 6RJU | 4906 | 2024-03-10 | 2019-04-29 | 3.2 | 4.49 | 2.14 | 10.0 | 0.007 | 0.93 | 0.0 | 0.05 | 15.36 | 0.00 | 2.423 | 4.52 | 0.00 | 11.6 | 88.4 | 0.0 | -7.10 | 0.22 | -0.01 | -0.80 | 3.9 | 0.003 | 0.66 | 0.0 | 0.03 | 15.97 | 0.00 | 2.278 | 7.54 | 1.01 | 7.0 | 93.0 | 0.0 | -0.88 | 1.30 | 0.30 | 0.04 | 1.02 | 1992 | 131 | 1 | 0 | 0 | 0 | 997 | logfile |
✔ | 6GYL | 0091 | 2024-03-24 | 2018-06-30 | 4.8 | 4.06 | 4.25 | 12.0 | 0.008 | 0.47 | 0.0 | 0.04 | 11.78 | 0.00 | 0.860 | 9.27 | 0.16 | 6.2 | 92.8 | 1.0 | -3.33 | 0.32 | 0.00 | — | 3.5 | 0.003 | 0.80 | 0.0 | 0.05 | 14.75 | 0.01 | 2.093 | 18.95 | 0.00 | 5.4 | 94.4 | 0.3 | -1.55 | 1.31 | 0.51 | 0.19 | — | 43409 | 5250 | 30 | 112 | 11 | 0 | 0 | logfile |
✔ | 8A1S | 15086 | 2024-03-14 | 2022-06-02 | 4.0 | 3.83 | 3.95 | 37.0 | 0.008 | 0.74 | 0.0 | 0.05 | 14.73 | 0.00 | 1.988 | 10.18 | 0.97 | 3.9 | 96.0 | 0.2 | -0.24 | 0.26 | 0.00 | — | 3.8 | 0.005 | 0.94 | 1.0 | 0.05 | 13.34 | 0.01 | 2.007 | 21.22 | 1.97 | 6.6 | 93.2 | 0.2 | -1.51 | 1.68 | 0.34 | 0.23 | — | 67152 | 8528 | 32 | 0 | 32 | 0 | 0 | logfile |
✔ | 8J5Y | 33733 | 2024-03-15 | 2023-04-24 | 3.07 | 3.50 | 3.24 | 20.0 | 0.004 | 0.84 | 0.0 | 0.05 | 13.88 | 0.01 | 2.153 | 12.97 | 0.00 | 6.0 | 93.7 | 0.3 | -1.55 | 0.08 | 0.00 | 0.39 | 3.4 | 0.003 | 0.74 | 0.0 | 0.04 | 15.95 | 0.00 | 2.112 | 15.74 | 2.42 | 7.6 | 92.3 | 0.1 | -1.26 | 1.56 | 0.12 | 0.06 | 0.26 | 10905 | 1389 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 8iEN | 35387 | 2024-03-11 | 2023-02-15 | 3.25 | 3.66 | 3.30 | 7.2 | 0.004 | 1.21 | 0.0 | 0.04 | 14.04 | 0.00 | 2.168 | 8.43 | 0.24 | 5.0 | 94.9 | 0.1 | -2.18 | 0.18 | 0.00 | -0.05 | 3.5 | 0.003 | 1.04 | 0.0 | 0.04 | 16.13 | 0.01 | 2.094 | 16.86 | 1.18 | 8.4 | 91.6 | 0.0 | -1.45 | 1.69 | 0.35 | 0.28 | 0.69 | 7678 | 991 | 2 | 0 | 4 | 0 | 0 | logfile |
✘ | 6MiX | 9132 | 2024-03-24 | 2018-09-20 | 3.6 | 4.57 | — | 14.0 | 0.007 | 1.19 | 0.0 | 0.07 | 16.40 | 0.01 | 2.212 | 9.79 | 2.30 | 14.6 | 85.0 | 0.4 | -5.69 | -0.03 | 0.00 | 0.22 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 43120 | 5348 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 6EU1 | 3956 | 2024-03-24 | 2017-10-27 | 3.4 | 3.40 | — | 6.6 | 0.005 | 1.14 | 0.0 | 0.06 | 13.02 | 0.01 | 1.732 | 6.52 | 0.50 | 16.1 | 83.5 | 0.4 | -5.70 | 0.20 | 0.01 | 0.29 | 3.4 | 0.009 | 1.12 | 3.0 | 0.06 | 16.74 | 0.01 | 1.632 | 25.08 | 2.23 | 17.0 | 82.7 | 0.3 | -3.97 | 1.80 | 0.61 | 0.59 | 0.63 | 40547 | 5012 | 24 | 43 | 7 | 0 | 0 | logfile |
✘ | 5X1G | 6701 | 2024-03-10 | 2017-01-25 | 4.5 | 7.89 | — | 37.0 | 0.008 | 1.42 | 0.0 | 0.05 | 10.05 | 0.01 | 2.345 | 27.78 | 0.00 | 6.9 | 93.1 | 0.0 | -2.75 | 0.00 | 0.01 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 155 | 31 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 8GWB | 34308 | 2024-03-18 | 2022-09-16 | 2.75 | 2.95 | 2.85 | 25.0 | 0.009 | 1.07 | 1.0 | 0.05 | 17.30 | 0.01 | 1.556 | 16.84 | 2.25 | 7.5 | 92.3 | 0.2 | -2.40 | 0.29 | 0.01 | 0.23 | 25.0 | 0.004 | 0.81 | 0.0 | 0.04 | 17.94 | 0.01 | 1.944 | 21.98 | 3.71 | 9.2 | 90.7 | 0.1 | -1.83 | 1.62 | 0.36 | 0.18 | 0.12 | 21879 | 2655 | 16 | 54 | 10 | 7 | 0 | logfile |
✔ | 7XMX | 33307 | 2024-03-21 | 2022-04-27 | 3.62 | 3.63 | 3.44 | 22.0 | 0.012 | 1.30 | 7.0 | 0.09 | 12.65 | 0.01 | 1.407 | 4.82 | 1.34 | 6.6 | 93.3 | 0.1 | -0.95 | 0.29 | 0.01 | 0.23 | 21.0 | 0.003 | 0.66 | 0.0 | 0.04 | 14.30 | 0.00 | 2.124 | 10.62 | 2.07 | 5.6 | 94.3 | 0.1 | -0.83 | 1.07 | 0.32 | 0.14 | 0.16 | 28727 | 3700 | 12 | 0 | 24 | 0 | 0 | logfile |
✔ | 6Q97 | 4476 | 2024-03-03 | 2018-12-17 | 3.9 | 3.69 | — | 20.0 | 0.011 | 1.20 | 0.0 | 0.16 | 24.87 | 0.02 | 1.320 | 6.99 | 0.38 | 10.1 | 89.8 | 0.1 | -5.34 | 0.15 | 0.01 | 0.22 | 3.6 | 0.005 | 0.92 | 1.0 | 0.05 | 25.72 | 0.01 | 0.951 | 21.35 | 3.55 | 10.5 | 89.5 | 0.0 | -3.27 | 2.51 | 0.27 | 0.22 | 0.31 | 156609 | 6124 | 72 | 5051 | 441 | 2 | 0 | logfile |
✔ | 6T59 | 10380 | 2024-03-20 | 2019-10-15 | 3.11 | 3.19 | 3.02 | 7.3 | 0.011 | 0.83 | 0.0 | 0.05 | 23.92 | 0.00 | 1.148 | 10.80 | 0.76 | 8.9 | 91.0 | 0.1 | -5.04 | 0.22 | 0.01 | 0.07 | 3.1 | 0.004 | 0.83 | 0.0 | 0.04 | 24.85 | 0.01 | 0.989 | 23.83 | 2.09 | 8.7 | 91.2 | 0.0 | -2.39 | 2.10 | 0.60 | 0.60 | 0.68 | 143047 | 7383 | 64 | 3890 | 225 | 0 | 0 | logfile |
✔ | 7VZ3 | 32219 | 2024-03-17 | 2021-11-15 | 2.46 | 2.36 | 2.43 | 19.0 | 0.009 | 1.08 | 2.0 | 0.07 | 12.80 | 0.01 | 2.203 | 4.37 | 0.26 | 5.4 | 94.5 | 0.1 | -1.44 | 0.12 | 0.02 | 0.32 | 2.2 | 0.005 | 0.92 | 1.0 | 0.05 | 14.34 | 0.01 | 1.998 | 15.23 | 1.79 | 6.2 | 93.7 | 0.1 | -1.36 | 1.71 | 0.22 | 0.15 | 0.55 | 17415 | 2256 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 5MSH | 3565 | 2024-03-10 | 2017-01-04 | 4.25 | 3.96 | — | 20.0 | 0.014 | 1.56 | 0.0 | 0.07 | 9.56 | 0.01 | 2.323 | 3.07 | 0.00 | 6.1 | 92.5 | 1.5 | -0.93 | 0.01 | 0.02 | — | 3.8 | 0.003 | 0.78 | 0.0 | 0.05 | 13.12 | 0.01 | 2.193 | 15.96 | 0.00 | 7.5 | 92.5 | 0.0 | -1.32 | 1.97 | 0.04 | 0.15 | — | 4287 | 551 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 8FD5 | 29002 | 2024-03-10 | 2022-12-02 | 4.57 | 4.19 | — | 10.0 | 0.016 | 2.15 | 4.0 | 0.13 | 13.14 | 0.02 | 2.541 | 0.16 | 0.29 | 3.8 | 96.2 | 0.0 | -1.38 | 0.28 | 0.02 | — | 3.6 | 0.002 | 0.67 | 0.0 | 0.04 | 13.21 | 0.01 | 2.134 | 9.88 | 0.00 | 6.0 | 94.0 | 0.0 | -1.15 | 1.23 | 0.39 | 0.12 | — | 3214 | 419 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 7XoV | 33360 | 2024-03-11 | 2022-05-01 | 3.0 | 3.23 | 3.00 | 6.0 | 0.019 | 1.84 | 0.0 | 0.09 | 10.85 | 0.02 | 2.322 | 6.84 | 0.90 | 3.0 | 96.9 | 0.1 | 0.50 | 0.14 | 0.02 | 0.62 | 3.3 | 0.003 | 0.73 | 0.0 | 0.04 | 15.48 | 0.00 | 2.051 | 10.57 | 1.79 | 3.8 | 96.1 | 0.1 | 0.33 | 1.71 | 0.48 | 0.61 | 1.14 | 8218 | 1036 | 5 | 0 | 1 | 1 | 0 | logfile |
✘ | 6Qi8 | 4552 | 2024-03-16 | 2019-01-18 | 3.75 | 3.92 | — | 10.4 | 0.004 | 0.91 | 0.0 | 0.05 | 16.35 | 0.01 | 1.999 | 4.27 | 0.19 | 5.5 | 94.5 | 0.0 | -5.84 | 0.17 | 0.02 | 0.43 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 14789 | 1907 | 12 | 0 | 6 | 0 | 0 | logfile |
✔ | 5GAK | 3227 | 2024-03-15 | 2015-12-09 | 3.88 | 4.13 | — | 19.0 | 0.006 | 0.94 | 0.0 | 0.06 | 25.75 | 0.01 | 0.816 | 23.89 | 0.26 | 9.2 | 90.2 | 0.7 | -3.81 | 0.21 | 0.02 | 0.28 | 3.9 | 0.003 | 0.77 | 0.0 | 0.04 | 24.43 | 0.00 | 1.986 | 20.92 | 2.20 | 8.8 | 90.9 | 0.4 | -2.53 | 1.95 | 0.33 | 0.23 | 0.18 | 128975 | 6434 | 50 | 3597 | 234 | 0 | 0 | logfile |