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Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 8T2T | 40987 | 2024-03-16 | 2023-06-06 | 3.0 | 3.39 | 3.19 | 9.5 | 0.006 | 0.97 | 0.0 | 0.05 | 24.84 | 0.01 | 1.982 | 4.25 | 0.00 | 4.5 | 95.0 | 0.5 | -1.78 | 0.45 | 0.06 | 0.14 | 3.0 | 0.007 | 1.28 | 0.0 | 0.06 | 26.99 | 0.01 | 0.920 | 37.81 | 5.28 | 4.7 | 95.3 | 0.0 | -2.15 | 2.56 | 0.75 | 0.71 | 1.29 | 14876 | 387 | 5 | 546 | 12 | 0 | 0 | logfile |
✔ | 6KFK | 9974 | 2024-03-12 | 2019-07-08 | 4.1 | 4.28 | — | 15.0 | 0.015 | 1.99 | 0.0 | 0.08 | 10.94 | 0.01 | 1.444 | 20.13 | 0.00 | 8.2 | 89.5 | 2.2 | -1.03 | 0.14 | 0.06 | — | 4.2 | 0.004 | 0.91 | 0.0 | 0.05 | 12.96 | 0.00 | 2.067 | 21.77 | 0.00 | 7.8 | 91.3 | 0.9 | -1.51 | 2.73 | 0.24 | 0.31 | — | 65076 | 8844 | 22 | 0 | 0 | 0 | 0 | logfile |
✔ | 8G9R | 29874 | 2024-03-10 | 2023-02-21 | 3.28 | 3.68 | 2.90 | 44.0 | 0.003 | 0.59 | 0.0 | 0.05 | 16.84 | 0.01 | 2.542 | 2.24 | 0.00 | 5.7 | 94.3 | 0.0 | -3.38 | 0.13 | 0.07 | 1.03 | 4.2 | 0.004 | 0.77 | 0.0 | 0.05 | 16.59 | 0.01 | 2.246 | 16.24 | 3.08 | 10.6 | 89.4 | 0.0 | -3.56 | 2.52 | 0.26 | 0.35 | 1.90 | 3570 | 455 | 5 | 0 | 0 | 0 | 0 | logfile |
✔ | 6TQM | 10555 | 2024-03-24 | 2019-12-16 | 3.8 | 4.34 | 3.78 | 20.0 | 0.014 | 0.98 | 0.0 | 0.12 | 16.14 | 0.01 | 2.083 | 4.06 | 1.40 | 14.5 | 85.5 | 0.0 | -5.95 | 0.30 | 0.07 | 0.30 | 3.9 | 0.003 | 0.74 | 0.0 | 0.04 | 16.19 | 0.00 | 1.885 | 14.29 | 1.93 | 9.1 | 90.9 | 0.0 | -3.43 | 1.27 | 0.38 | 0.24 | 0.36 | 39616 | 2578 | 6 | 0 | 4 | 0 | 19804 | logfile |
✔ | 8HiA | 34813 | 2024-03-11 | 2022-11-19 | 4.9 | 4.49 | 2.13 | 9.6 | 0.001 | 0.36 | 0.0 | 0.05 | 15.83 | 0.00 | 2.251 | 1.11 | 2.86 | 12.1 | 87.6 | 0.2 | -4.39 | 0.47 | 0.07 | — | 9.4 | 0.009 | 0.98 | 0.0 | 0.05 | 15.73 | 0.01 | 2.082 | 32.36 | 4.76 | 19.0 | 81.0 | 0.0 | -5.53 | 12.59 | 0.68 | 0.24 | — | 7200 | 460 | 20 | 0 | 0 | 0 | 3660 | logfile |
✔ | 8DFo | 27409 | 2024-03-19 | 2022-06-22 | 3.1 | 3.40 | 3.29 | 7.2 | 0.022 | 1.64 | 93.0 | 0.16 | 18.53 | 0.01 | 1.724 | 6.88 | 0.57 | 4.8 | 95.2 | 0.0 | -0.44 | 0.27 | 0.07 | 0.22 | 3.4 | 0.003 | 0.73 | 0.0 | 0.04 | 18.14 | 0.01 | 2.099 | 16.30 | 1.88 | 4.4 | 95.6 | 0.0 | -0.23 | 1.84 | 0.44 | 0.39 | 0.68 | 23861 | 2912 | 13 | 45 | 0 | 0 | 0 | logfile |
✔ | 6LTJ | 0974 | 2024-03-22 | 2020-01-22 | 3.7 | 4.16 | — | 15.0 | 0.010 | 1.08 | 12.0 | 0.07 | 22.18 | 0.01 | 2.173 | 14.05 | 2.63 | 6.4 | 93.3 | 0.3 | -3.67 | 0.46 | 0.08 | 0.04 | 3.6 | 0.004 | 0.82 | 0.0 | 0.04 | 22.35 | 0.01 | 1.996 | 24.67 | 2.10 | 4.8 | 95.2 | 0.0 | -0.58 | 1.60 | 0.60 | 0.29 | 0.45 | 34283 | 3656 | 21 | 238 | 1 | 0 | 0 | logfile |
✘ | 6RBE | 4795 | 2024-03-16 | 2019-04-10 | 3.8 | 3.81 | 4.03 | 5.1 | 0.007 | 1.27 | 0.0 | 0.06 | 23.46 | 0.01 | 2.076 | 9.10 | 1.35 | 11.9 | 86.8 | 1.2 | -4.17 | 0.38 | 0.09 | 0.25 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 72721 | 4512 | 33 | 1750 | 0 | 0 | 0 | logfile |
✔ | 8GWE | 34310 | 2024-03-18 | 2022-09-16 | 2.66 | 3.19 | 2.77 | 16.0 | 0.009 | 0.97 | 5.0 | 0.06 | 18.80 | 0.01 | 1.065 | 13.66 | 5.00 | 8.4 | 91.2 | 0.3 | -1.93 | 0.39 | 0.09 | 0.45 | 10.1 | 0.004 | 0.93 | 1.0 | 0.05 | 18.70 | 0.00 | 1.793 | 18.44 | 4.61 | 9.2 | 90.6 | 0.2 | -2.22 | 1.48 | 0.46 | 0.25 | 0.13 | 22040 | 2668 | 15 | 56 | 10 | 1 | 0 | logfile |
✔ | 7EGC | 31112 | 2024-03-11 | 2021-03-24 | 3.9 | 3.72 | — | 4.9 | 0.008 | 1.13 | 76.0 | 0.08 | 15.52 | 0.01 | 1.402 | 24.31 | 3.39 | 7.3 | 91.9 | 0.8 | -3.59 | 0.43 | 0.10 | 0.10 | 3.1 | 0.003 | 0.75 | 0.0 | 0.04 | 16.64 | 0.00 | 2.033 | 14.85 | 1.87 | 5.6 | 94.2 | 0.2 | -0.50 | 1.16 | 0.50 | 0.30 | 0.41 | 113129 | 13879 | 63 | 142 | 18 | 0 | 0 | logfile |
✔ | 7W6P | 32331 | 2024-03-11 | 2021-12-02 | 3.47 | 3.79 | — | 9.6 | 0.004 | 0.70 | 0.0 | 0.04 | 13.78 | 0.00 | 2.196 | 14.60 | 0.11 | 7.0 | 93.0 | 0.0 | -0.94 | 0.22 | 0.11 | 0.18 | 8.7 | 0.003 | 0.66 | 0.0 | 0.04 | 15.30 | 0.00 | 2.211 | 13.58 | 2.11 | 5.7 | 94.3 | 0.0 | -0.69 | 1.89 | 0.31 | 0.25 | 0.29 | 8408 | 1083 | 5 | 0 | 1 | 0 | 0 | logfile |
✔ | 7YKS | 33896 | 2024-03-17 | 2022-07-23 | 3.0 | 3.20 | 3.06 | 4.7 | 0.008 | 1.00 | 0.0 | 0.06 | 10.27 | 0.01 | 2.291 | 4.01 | 0.00 | 6.7 | 93.1 | 0.2 | -6.58 | 0.17 | 0.11 | -0.18 | 3.2 | 0.004 | 0.93 | 2.0 | 0.04 | 16.76 | 0.01 | 2.171 | 10.38 | 1.00 | 4.8 | 95.2 | 0.0 | -0.98 | 2.24 | 0.59 | 0.80 | 1.81 | 18984 | 2364 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 5L3P | 4001 | 2024-03-26 | 2016-05-24 | 3.7 | 4.66 | — | 16.0 | 0.006 | 0.60 | 0.0 | 0.19 | 22.20 | 0.02 | 2.115 | 7.18 | 0.00 | 8.2 | 89.4 | 2.4 | -1.95 | 0.44 | 0.11 | 0.16 | 3.9 | 0.005 | 0.99 | 2.0 | 0.04 | 24.17 | 0.01 | 1.748 | 42.81 | 1.76 | 10.4 | 89.0 | 0.6 | -2.39 | 2.18 | 0.66 | 0.42 | -0.25 | 149606 | 6419 | 58 | 4704 | 76 | 0 | 0 | logfile |
✔ | 6C9Y | 7438 | 2024-03-21 | 2018-01-29 | 4.25 | 4.33 | — | 9.7 | 0.008 | 1.53 | 5.0 | 0.08 | 13.66 | 0.01 | 2.064 | 6.62 | 5.32 | 7.8 | 90.7 | 1.5 | -4.02 | 0.50 | 0.12 | — | 4.2 | 0.003 | 0.78 | 0.0 | 0.04 | 13.51 | 0.00 | 2.046 | 16.24 | 0.00 | 6.1 | 93.8 | 0.1 | -1.28 | 2.39 | 0.60 | 0.36 | — | 28920 | 3685 | 7 | 0 | 3 | 0 | 0 | logfile |
✔ | 5o9G | 3765 | 2024-03-18 | 2017-06-19 | 4.8 | 5.07 | 4.71 | 10.4 | 0.003 | 0.48 | 0.0 | 0.03 | 22.57 | 0.00 | 2.194 | 7.39 | 0.36 | 9.1 | 90.8 | 0.1 | -4.25 | 0.51 | 0.13 | — | 4.8 | 0.004 | 0.78 | 0.0 | 0.04 | 24.61 | 0.01 | 1.121 | 17.84 | 0.07 | 5.9 | 94.0 | 0.1 | -1.57 | 2.61 | 0.86 | 0.76 | — | 19681 | 1610 | 11 | 324 | 2 | 0 | 0 | logfile |
✔ | 8X63 | 38078 | 2024-03-10 | 2023-11-20 | 3.2 | 4.09 | 3.72 | 4.5 | 0.005 | 0.74 | 1.0 | 0.05 | 15.26 | 0.01 | 2.411 | 9.43 | 0.81 | 8.0 | 92.0 | 0.0 | -0.11 | 0.13 | 0.13 | 0.69 | 4.1 | 0.004 | 0.74 | 0.0 | 0.04 | 17.26 | 0.01 | 2.293 | 9.87 | 2.85 | 7.6 | 92.4 | 0.0 | -0.32 | 1.25 | 0.29 | 0.45 | 0.26 | 2252 | 270 | 2 | 0 | 1 | 0 | 0 | logfile |
✔ | 6H05 | 0108 | 2024-03-24 | 2018-07-06 | 2.9 | 3.15 | — | 3.5 | 0.016 | 1.09 | 0.0 | 0.07 | 9.74 | 0.01 | 0.426 | 17.80 | 0.00 | 8.5 | 91.5 | 0.0 | -5.50 | 0.36 | 0.13 | 0.50 | 3.1 | 0.003 | 0.86 | 0.0 | 0.05 | 15.34 | 0.01 | 2.128 | 15.29 | 2.09 | 4.2 | 95.8 | 0.0 | -1.19 | 1.59 | 0.57 | 0.46 | 0.82 | 44544 | 5664 | 24 | 0 | 0 | 0 | 0 | logfile |
✔ | 6PB5 | 20287 | 2024-03-15 | 2019-06-13 | 4.52 | 5.95 | — | 8.8 | 0.011 | 1.31 | 0.0 | 0.06 | 16.37 | 0.01 | 1.966 | 13.18 | 0.26 | 11.6 | 87.7 | 0.7 | -4.55 | 0.58 | 0.14 | — | 4.0 | 0.004 | 0.76 | 0.0 | 0.04 | 16.96 | 0.01 | 1.776 | 24.41 | 0.00 | 10.6 | 89.3 | 0.2 | -2.94 | 2.25 | 0.77 | 0.62 | — | 69696 | 4084 | 13 | 156 | 5 | 0 | 34319 | logfile |
✔ | 5M5H | 4155 | 2024-03-10 | 2016-10-21 | 4.5 | 2.29 | — | 2.2 | 0.007 | 1.50 | 0.0 | 0.08 | 12.37 | 0.01 | 2.186 | 39.89 | 0.00 | 8.7 | 88.9 | 2.4 | -5.94 | 0.14 | 0.14 | — | 2.1 | 0.003 | 0.85 | 0.0 | 0.05 | 12.37 | 0.01 | 2.369 | 17.88 | 0.00 | 7.9 | 92.1 | 0.0 | -0.80 | 1.84 | 0.15 | 0.14 | — | 1086 | 132 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 8UoP | 42435 | 2024-03-15 | 2023-10-20 | 3.8 | 3.97 | 3.89 | 3.8 | 0.005 | 0.91 | 0.0 | 0.04 | 16.45 | 0.01 | 1.954 | 17.97 | 0.73 | 15.7 | 83.6 | 0.7 | -3.60 | 0.18 | 0.15 | 0.40 | 3.9 | 0.003 | 0.64 | 0.0 | 0.04 | 17.20 | 0.00 | 1.949 | 14.94 | 4.40 | 11.8 | 87.9 | 0.3 | -3.15 | 0.92 | 0.24 | 0.24 | 0.27 | 13188 | 872 | 2 | 0 | 0 | 0 | 6544 | logfile |