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Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 6CAJ | 7442 | 2024-03-19 | 2018-01-31 | 2.8 | 2.84 | — | 4.2 | 0.008 | 0.88 | 0.0 | 0.17 | 10.48 | 0.01 | 1.467 | 5.88 | 0.24 | 4.5 | 95.5 | 0.0 | -3.63 | 0.33 | 0.15 | 2.28 | 2.9 | 0.004 | 0.68 | 0.0 | 0.04 | 16.31 | 0.00 | 2.146 | 10.90 | 3.15 | 5.1 | 94.9 | 0.0 | -0.07 | 0.86 | 0.75 | 0.84 | 2.81 | 24295 | 3210 | 11 | 0 | 1 | 0 | 0 | logfile |
✔ | 5WVE | 6690 | 2024-03-17 | 2016-12-24 | 4.4 | 4.90 | — | 5.1 | 0.008 | 1.34 | 7.0 | 0.08 | 19.50 | 0.01 | 1.493 | 69.05 | 16.86 | 7.1 | 89.5 | 3.4 | -0.75 | 0.49 | 0.15 | — | 4.5 | 0.004 | 0.84 | 0.0 | 0.04 | 13.65 | 0.00 | 1.771 | 25.54 | 0.00 | 7.8 | 91.5 | 0.7 | -1.97 | 1.60 | 0.79 | 0.60 | — | 78605 | 9766 | 39 | 0 | 21 | 0 | 0 | logfile |
✔ | 5NV3 | 3699 | 2024-03-23 | 2017-05-03 | 3.39 | 3.43 | — | 3.4 | 0.007 | 1.22 | 2.0 | 0.07 | 14.59 | 0.00 | 2.164 | 2.84 | 0.94 | 5.6 | 94.2 | 0.2 | -2.82 | 0.09 | 0.16 | 3.78 | 3.4 | 0.003 | 0.62 | 0.0 | 0.04 | 16.19 | 0.00 | 2.018 | 7.86 | 2.90 | 3.4 | 96.6 | 0.0 | -0.47 | 1.62 | 0.59 | 0.75 | 4.20 | 37816 | 4768 | 24 | 0 | 16 | 0 | 0 | logfile |
✔ | 8GWG | 34312 | 2024-03-18 | 2022-09-17 | 3.37 | 3.96 | 3.48 | 7.9 | 0.009 | 0.94 | 5.0 | 0.06 | 18.83 | 0.01 | 2.045 | 13.54 | 5.14 | 8.4 | 91.2 | 0.4 | -1.94 | 0.59 | 0.16 | -0.05 | 3.5 | 0.005 | 0.92 | 1.0 | 0.05 | 18.74 | 0.01 | 1.641 | 23.79 | 4.08 | 7.9 | 91.9 | 0.2 | -2.18 | 1.77 | 0.76 | 0.62 | 0.32 | 21955 | 2668 | 13 | 52 | 9 | 1 | 0 | logfile |
✘ | 8ES4 | 28562 | 2024-03-11 | 2022-10-13 | 3.3 | 3.43 | 3.25 | 5.2 | 0.002 | 0.49 | 0.0 | 0.04 | 13.99 | 0.00 | 0.946 | 19.53 | 0.00 | 3.7 | 96.2 | 0.0 | 0.75 | 0.36 | 0.16 | 0.10 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 110772 | 14766 | 48 | 0 | 0 | 0 | 0 | logfile |
✔ | 5LKH | 4068 | 2024-03-23 | 2016-07-22 | 3.46 | 5.27 | — | 11.0 | 0.018 | 2.37 | 65.0 | 0.12 | 12.66 | 0.02 | 2.255 | 87.12 | 1.96 | 3.4 | 95.2 | 1.4 | -0.27 | 0.38 | 0.17 | -0.03 | 8.8 | 0.005 | 0.87 | 0.0 | 0.04 | 15.69 | 0.00 | 1.528 | 24.67 | 2.06 | 5.7 | 94.2 | 0.0 | -0.64 | 2.00 | 0.50 | 0.54 | 0.14 | 37345 | 4740 | 5 | 0 | 0 | 0 | 0 | logfile |
✔ | 6CRZ | 7577 | 2024-03-20 | 2018-03-19 | 3.3 | 3.42 | 3.35 | 4.5 | 0.007 | 1.01 | 0.0 | 0.06 | 13.45 | 0.01 | 2.254 | 6.77 | 0.04 | 7.8 | 92.2 | 0.0 | -4.10 | 0.39 | 0.17 | 0.01 | 3.4 | 0.006 | 0.92 | 0.0 | 0.05 | 13.59 | 0.01 | 2.031 | 17.15 | 0.94 | 8.3 | 91.7 | 0.0 | -2.36 | 1.65 | 0.65 | 0.64 | 0.82 | 25909 | 3205 | 25 | 0 | 66 | 0 | 0 | logfile |
✔ | 1oED | 1044 | 2024-03-10 | 2003-03-24 | 4.0 | 3.94 | — | 10.4 | 0.014 | 2.29 | 3.0 | 0.10 | 17.23 | 0.01 | 1.183 | 224.94 | 19.76 | 5.2 | 92.7 | 2.1 | -3.67 | 0.39 | 0.18 | — | 9.0 | 0.005 | 1.06 | 0.0 | 0.05 | 16.10 | 0.01 | 2.206 | 23.77 | 2.08 | 2.6 | 97.4 | 0.0 | 1.81 | 2.72 | 0.59 | 0.38 | — | 4926 | 636 | 5 | 0 | 0 | 0 | 0 | logfile |
✔ | 8FXH | 29533 | 2024-03-21 | 2023-01-24 | 2.8 | 2.94 | 2.88 | 4.0 | 0.006 | 1.37 | 50.0 | 0.10 | 17.25 | 0.01 | 2.235 | 6.73 | 1.19 | 7.8 | 91.8 | 0.4 | -1.03 | 0.32 | 0.19 | 0.18 | 2.9 | 0.003 | 0.73 | 0.0 | 0.05 | 18.05 | 0.01 | 2.050 | 6.85 | 2.04 | 8.1 | 91.6 | 0.3 | -1.14 | 1.88 | 0.76 | 0.85 | 1.88 | 30228 | 3786 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 8BY8 | 16324 | 2024-03-11 | 2022-12-12 | 2.5 | 3.35 | 2.68 | 3.1 | 0.002 | 0.50 | 0.0 | 0.04 | 13.68 | 0.00 | 1.849 | 5.96 | 2.50 | 3.5 | 96.4 | 0.1 | 0.08 | 0.60 | 0.19 | 2.90 | 3.1 | 0.004 | 0.75 | 1.0 | 0.04 | 14.46 | 0.00 | 1.871 | 9.20 | 1.97 | 5.4 | 94.5 | 0.1 | -0.19 | 0.54 | 0.76 | 0.74 | 3.01 | 38783 | 2568 | 2 | 0 | 0 | 0 | 19223 | logfile |
✘ | 6MN7 | 9166 | 2024-03-18 | 2018-10-01 | 4.8 | 5.01 | — | 5.0 | 0.016 | 2.23 | 12.0 | 0.12 | 17.86 | 0.02 | 1.395 | 35.74 | 0.57 | 8.6 | 89.4 | 2.0 | -2.34 | 0.50 | 0.19 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 21447 | 2418 | 66 | 0 | 192 | 0 | 0 | logfile |
✔ | 7NK1 | 12428 | 2024-03-20 | 2021-02-17 | 4.22 | 4.30 | — | 4.0 | 0.004 | 0.69 | 0.0 | 0.04 | 14.32 | 0.01 | 1.907 | 9.03 | 0.19 | 4.3 | 95.7 | 0.0 | -0.71 | 0.46 | 0.19 | — | 4.4 | 0.004 | 0.67 | 0.0 | 0.04 | 14.72 | 0.00 | 1.873 | 21.16 | 0.00 | 6.0 | 94.0 | 0.0 | -0.98 | 1.61 | 0.61 | 0.40 | — | 28747 | 1791 | 6 | 23 | 0 | 0 | 13868 | logfile |
✔ | 7YKR | 33895 | 2024-03-22 | 2022-07-23 | 3.2 | 3.70 | 3.34 | 4.7 | 0.008 | 1.02 | 8.0 | 0.06 | 10.92 | 0.01 | 2.215 | 4.01 | 0.83 | 9.3 | 90.7 | 0.0 | -6.34 | 0.34 | 0.19 | 0.00 | 3.6 | 0.003 | 0.71 | 0.0 | 0.04 | 15.79 | 0.00 | 2.204 | 9.30 | 1.34 | 7.2 | 92.8 | 0.0 | -0.59 | 2.74 | 0.62 | 0.76 | 1.77 | 31924 | 4140 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 8DHX | 27437 | 2024-03-14 | 2022-06-28 | 2.92 | 3.26 | 3.25 | 6.7 | 0.004 | 0.82 | 0.0 | 0.04 | 17.61 | 0.00 | 2.218 | 6.05 | 1.95 | 1.8 | 97.7 | 0.6 | 3.55 | 0.41 | 0.20 | 4.09 | 3.3 | 0.003 | 0.58 | 0.0 | 0.03 | 18.14 | 0.00 | 2.340 | 5.35 | 1.52 | 2.3 | 97.7 | 0.0 | 5.72 | 0.48 | 0.70 | 0.78 | 2.96 | 34200 | 4152 | 24 | 0 | 0 | 0 | 0 | logfile |
✘ | 7ZNL | 14808 | 2024-03-18 | 2022-04-21 | 3.45 | 3.67 | 3.55 | 3.4 | 0.005 | 0.78 | 0.0 | 0.04 | 11.78 | 0.01 | 2.171 | 7.60 | 6.04 | 6.6 | 93.1 | 0.3 | -2.22 | 0.37 | 0.21 | 0.51 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 84821 | 11173 | 28 | 0 | 0 | 0 | 0 | logfile |
✔ | 7R4Q | 14314 | 2024-03-25 | 2022-02-09 | 3.6 | 3.14 | — | 5.7 | 0.022 | 3.26 | 109.0 | 0.39 | 16.09 | 0.02 | 1.450 | 30.29 | 3.30 | 8.7 | 91.1 | 0.2 | -2.35 | 0.48 | 0.21 | -0.05 | 4.0 | 0.011 | 1.13 | 8.0 | 0.17 | 15.41 | 0.01 | 1.786 | 28.61 | 1.65 | 8.9 | 91.0 | 0.1 | -2.25 | 1.78 | 0.64 | 0.59 | 0.51 | 51420 | 3414 | 13 | 0 | 43 | 0 | 24182 | logfile |
✔ | 7APK | 11857 | 2024-03-16 | 2020-10-17 | 3.3 | 3.26 | — | 3.5 | 0.004 | 0.81 | 0.0 | 0.05 | 8.50 | 0.01 | 2.256 | 4.07 | 0.10 | 4.7 | 95.2 | 0.1 | -2.73 | 0.41 | 0.22 | 0.13 | 3.0 | 0.003 | 0.67 | 0.0 | 0.04 | 12.95 | 0.00 | 2.098 | 11.33 | 1.10 | 5.9 | 94.0 | 0.1 | 1.23 | 1.13 | 0.50 | 0.44 | 0.89 | 72697 | 9893 | 30 | 0 | 74 | 0 | 0 | logfile |
✔ | 7ASN | 11901 | 2024-03-17 | 2020-10-27 | 2.73 | 4.10 | — | 3.0 | 0.008 | 1.04 | 0.0 | 0.05 | 25.09 | 0.01 | 1.953 | 13.53 | 0.48 | 11.3 | 88.6 | 0.1 | -3.27 | 0.46 | 0.23 | -0.03 | 2.3 | 0.005 | 0.78 | 0.0 | 0.04 | 24.92 | 0.01 | 2.022 | 25.16 | 3.59 | 10.0 | 90.0 | 0.0 | -2.38 | 2.01 | 0.87 | 0.80 | 1.19 | 80694 | 2545 | 25 | 2848 | 0 | 0 | 0 | logfile |
✔ | 6Q2o | 20576 | 2024-03-16 | 2019-08-08 | 3.65 | 3.77 | — | 3.9 | 0.004 | 0.79 | 0.0 | 0.05 | 8.54 | 0.01 | 1.534 | 3.25 | 0.12 | 5.6 | 94.4 | 0.0 | -3.75 | 0.48 | 0.23 | 0.05 | 3.6 | 0.006 | 0.95 | 0.0 | 0.05 | 14.65 | 0.01 | 2.096 | 20.66 | 2.59 | 8.3 | 91.7 | 0.0 | -2.44 | 2.06 | 0.68 | 0.64 | 0.63 | 15196 | 1900 | 8 | 0 | 20 | 0 | 0 | logfile |
✔ | 7oTi | 13060 | 2024-03-14 | 2021-06-10 | 4.2 | 4.80 | — | 7.9 | 0.014 | 1.99 | 12.0 | 0.10 | 16.95 | 0.02 | 2.507 | 0.59 | 4.71 | 10.8 | 87.9 | 1.4 | -3.63 | 0.36 | 0.23 | — | 4.9 | 0.003 | 0.81 | 0.0 | 0.04 | 14.46 | 0.00 | 2.116 | 16.85 | 0.00 | 6.6 | 92.9 | 0.5 | -1.00 | 1.72 | 0.51 | 0.49 | — | 9171 | 1182 | 1 | 0 | 0 | 0 | 0 | logfile |