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Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 3KTT | 5148 | 2022-12-11 | 2009-11-25 | 4.0 | 2.33 | — | 4.5 | 0.020 | 2.86 | 20.0 | 0.20 | 15.20 | 0.01 | 1.652 | 180.45 | 7.82 | 6.3 | 89.4 | 4.3 | -0.59 | 0.27 | 0.28 | — | 2.0 | 0.004 | 1.18 | 0.0 | 0.05 | 17.18 | 0.01 | 2.023 | 26.84 | 0.49 | 9.4 | 89.6 | 1.0 | -2.22 | 1.72 | 0.31 | 0.41 | — | 3855 | 513 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 6C9K | 7437 | 2022-12-20 | 2018-01-26 | 3.49 | 5.32 | — | 5.0 | 0.016 | 1.08 | 0.0 | 0.07 | 11.33 | 0.01 | 2.388 | 1.65 | 0.00 | 0.6 | 99.4 | 0.0 | 1.74 | 0.55 | 0.28 | 0.81 | 5.0 | 0.004 | 0.62 | 0.0 | 0.04 | 14.84 | 0.00 | 2.148 | 18.74 | 0.15 | 2.1 | 97.9 | 0.0 | 3.14 | 0.89 | 0.81 | 0.67 | -0.17 | 37632 | 4923 | 24 | 0 | 0 | 0 | 0 | logfile |
✔ | 5G2Y | 3332 | 2022-12-13 | 2016-04-16 | 4.5 | 4.38 | — | 3.8 | 0.001 | 0.22 | 0.0 | 0.01 | 11.90 | 0.00 | 2.269 | 2.32 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.58 | 0.28 | — | 3.7 | 0.007 | 1.01 | 0.0 | 0.05 | 23.66 | 0.01 | 1.957 | 72.02 | 0.00 | 0.0 | 0.0 | 0.0 | — | 3.26 | 0.89 | 0.78 | — | 13494 | 0 | 1 | 630 | 0 | 0 | 0 | logfile |
✔ | 7EGA | 31110 | 2022-12-16 | 2021-03-24 | 4.1 | 4.55 | — | 4.1 | 0.008 | 1.08 | 35.0 | 0.07 | 16.87 | 0.01 | 1.445 | 18.80 | 3.89 | 6.5 | 93.1 | 0.4 | -3.75 | 0.60 | 0.28 | — | 3.9 | 0.004 | 0.71 | 0.0 | 0.04 | 15.57 | 0.00 | 1.930 | 15.63 | 0.00 | 5.4 | 94.5 | 0.1 | -0.50 | 1.39 | 0.75 | 0.55 | — | 85697 | 10273 | 49 | 170 | 11 | 0 | 0 | logfile |
✔ | 6Q2J | 20572 | 2022-12-13 | 2019-08-08 | 4.1 | 4.32 | — | 4.1 | 0.006 | 0.96 | 0.0 | 0.06 | 8.65 | 0.01 | 1.677 | 4.31 | 0.13 | 5.0 | 94.8 | 0.1 | -3.22 | 0.52 | 0.28 | — | 4.2 | 0.004 | 0.82 | 0.0 | 0.05 | 11.93 | 0.00 | 2.127 | 14.34 | 0.00 | 6.6 | 93.4 | 0.0 | -1.81 | 2.06 | 0.69 | 0.61 | — | 13796 | 1738 | 8 | 0 | 22 | 0 | 0 | logfile |
✔ | 6XRE | 22294 | 2022-12-14 | 2020-07-12 | 4.6 | 7.52 | — | 4.5 | 0.011 | 1.16 | 1.0 | 0.07 | 10.73 | 0.01 | 0.771 | 5.43 | 0.24 | 7.9 | 91.5 | 0.6 | -3.72 | 0.62 | 0.29 | — | 4.5 | 0.003 | 0.69 | 0.0 | 0.04 | 12.02 | 0.00 | 1.869 | 14.56 | 0.00 | 11.8 | 88.1 | 0.0 | -2.78 | 0.92 | 0.85 | 0.65 | — | 68542 | 4289 | 18 | 0 | 9 | 0 | 34248 | logfile |
✔ | 6RUo | 10007 | 2022-12-22 | 2019-05-28 | 3.5 | 3.56 | — | 4.0 | 0.007 | 1.05 | 0.0 | 0.06 | 13.11 | 0.01 | 2.170 | 8.06 | 0.40 | 10.5 | 89.4 | 0.1 | -4.99 | 0.53 | 0.29 | 0.05 | 3.5 | 0.004 | 0.81 | 0.0 | 0.05 | 17.45 | 0.00 | 2.062 | 19.29 | 0.53 | 8.4 | 91.6 | 0.0 | -2.64 | 2.43 | 0.68 | 0.60 | 0.65 | 50792 | 6086 | 26 | 93 | 8 | 0 | 0 | logfile |
✔ | 5Li4 | 4052 | 2022-12-14 | 2016-07-14 | 4.2 | 5.13 | — | 4.0 | 0.053 | 3.06 | 114.0 | 0.34 | 14.44 | 0.02 | 0.111 | 93.07 | 2.94 | 14.0 | 79.1 | 6.9 | -4.32 | 0.24 | 0.30 | — | 4.0 | 0.004 | 1.00 | 0.0 | 0.05 | 13.63 | 0.01 | 2.096 | 28.96 | 0.00 | 14.1 | 84.7 | 1.2 | -3.67 | 4.17 | 0.34 | 0.57 | — | 20070 | 2562 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 7NKC | 12437 | 2022-12-16 | 2021-02-17 | 4.46 | 4.76 | — | 4.6 | 0.004 | 0.72 | 0.0 | 0.04 | 13.69 | 0.01 | 1.795 | 9.79 | 0.25 | 4.3 | 95.7 | 0.1 | -0.76 | 0.51 | 0.30 | — | 4.7 | 0.003 | 0.66 | 0.0 | 0.04 | 14.09 | 0.00 | 1.787 | 18.23 | 0.00 | 6.1 | 93.9 | 0.0 | -0.58 | 2.36 | 0.63 | 0.51 | — | 28788 | 1795 | 6 | 23 | 0 | 0 | 13868 | logfile |
✔ | 7EG9 | 31109 | 2022-12-16 | 2021-03-24 | 3.7 | 4.62 | — | 3.7 | 0.008 | 1.15 | 54.0 | 0.08 | 16.39 | 0.01 | 1.514 | 21.15 | 4.37 | 6.7 | 92.6 | 0.7 | -3.68 | 0.58 | 0.30 | 0.60 | 3.6 | 0.003 | 0.70 | 0.0 | 0.04 | 16.93 | 0.00 | 2.038 | 12.56 | 0.22 | 4.8 | 95.1 | 0.1 | -0.27 | 1.39 | 0.78 | 0.65 | 0.68 | 84318 | 10176 | 49 | 142 | 11 | 0 | 0 | logfile |
✔ | 5G2X | 3331 | 2022-12-14 | 2016-04-16 | 3.8 | 3.49 | — | 3.4 | 0.001 | 0.31 | 0.0 | 0.02 | 11.56 | 0.00 | 2.219 | 4.36 | 0.45 | 19.7 | 74.4 | 5.9 | -5.72 | 0.51 | 0.30 | -0.09 | 3.3 | 0.004 | 0.83 | 0.0 | 0.04 | 19.26 | 0.01 | 1.964 | 33.23 | 0.23 | 18.1 | 80.7 | 1.3 | -5.17 | 1.94 | 0.80 | 0.66 | 0.62 | 19072 | 487 | 3 | 704 | 0 | 0 | 0 | logfile |
✔ | 8F0U | 28781 | 2022-12-15 | 2022-11-04 | 3.1 | 3.37 | 3.22 | 3.6 | 0.031 | 1.77 | 0.0 | 0.13 | 9.86 | 0.01 | 2.388 | 0.65 | 0.00 | 0.8 | 99.2 | 0.0 | 0.72 | 0.29 | 0.30 | 0.88 | 3.5 | 0.004 | 0.65 | 0.0 | 0.05 | 13.79 | 0.00 | 1.946 | 7.23 | 0.10 | 5.8 | 94.2 | 0.0 | -0.55 | 0.97 | 0.50 | 0.66 | 1.69 | 78260 | 5252 | 39 | 0 | 0 | 0 | 39819 | logfile |
✘ | 5A7U | 3079 | 2022-12-18 | 2015-07-10 | 4.8 | 3.82 | — | 4.6 | 0.020 | 3.41 | 3.0 | 0.25 | 21.78 | 0.08 | 2.651 | 30.77 | 25.00 | 24.0 | 72.0 | 4.0 | -6.05 | -0.01 | 0.31 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 455 | 27 | 1 | 0 | 1 | 0 | 231 | logfile |
✔ | 6CS1 | 7579 | 2022-12-15 | 2018-03-19 | 4.6 | 4.79 | 4.84 | 6.8 | 0.005 | 0.85 | 0.0 | 0.05 | 8.80 | 0.01 | 2.229 | 7.30 | 0.00 | 7.2 | 92.8 | 0.0 | -4.20 | 0.61 | 0.31 | — | 4.6 | 0.006 | 0.96 | 0.0 | 0.06 | 11.68 | 0.01 | 1.907 | 31.00 | 0.00 | 11.4 | 88.6 | 0.0 | -2.91 | 1.89 | 0.71 | 0.57 | — | 25995 | 3202 | 27 | 0 | 75 | 0 | 0 | logfile |
✔ | 7Q1Z | 13776 | 2022-12-15 | 2021-10-22 | 3.4 | 2.41 | — | 4.0 | 0.003 | 0.55 | 0.0 | 0.04 | 12.53 | 0.00 | 2.074 | 6.33 | 0.04 | 2.2 | 97.8 | 0.0 | 0.60 | 0.48 | 0.31 | -0.02 | 2.1 | 0.004 | 0.75 | 0.0 | 0.05 | 16.03 | 0.00 | 2.048 | 11.98 | 0.78 | 3.9 | 96.1 | 0.0 | -0.28 | 1.65 | 0.75 | 0.75 | 1.75 | 23694 | 2916 | 21 | 0 | 63 | 0 | 0 | logfile |
✔ | 7Ao8 | 11837 | 2022-12-12 | 2020-10-14 | 4.5 | 5.23 | 4.51 | 3.6 | 0.011 | 1.51 | 8.0 | 0.26 | 16.21 | 0.01 | 1.219 | 8.99 | 4.18 | 6.9 | 92.5 | 0.6 | -3.46 | 0.62 | 0.31 | — | 3.6 | 0.007 | 0.98 | 0.0 | 0.05 | 14.43 | 0.01 | 1.950 | 38.71 | 0.00 | 8.5 | 91.5 | 0.1 | -2.24 | 2.67 | 0.85 | 0.74 | — | 10905 | 1350 | 9 | 0 | 8 | 0 | 0 | logfile |
✘ | 6i1X | 0326 | 2022-12-19 | 2018-10-30 | 3.7 | 3.83 | — | 3.8 | 0.013 | 1.81 | 34.0 | 0.10 | 14.94 | 0.01 | 0.458 | 50.06 | 4.35 | 7.5 | 90.6 | 1.9 | -3.51 | 0.50 | 0.32 | 0.28 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 54915 | 7290 | 15 | 0 | 0 | 0 | 0 | logfile |
✘ | 5UCY | 8539 | 2022-12-18 | 2016-12-22 | 4.6 | 4.99 | — | 4.6 | 0.011 | 1.21 | 3.0 | 0.06 | 13.21 | 0.01 | 0.244 | 89.25 | 0.68 | 11.3 | 88.3 | 0.5 | -4.47 | 0.50 | 0.32 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 24990 | 2610 | 12 | 3 | 6 | 0 | 4452 | logfile |
✔ | 6RWE | 10038 | 2022-12-11 | 2019-06-04 | 3.0 | 3.12 | — | 3.7 | 0.009 | 1.02 | 1.0 | 0.06 | 13.12 | 0.01 | 1.975 | 6.40 | 0.73 | 7.4 | 92.5 | 0.1 | -4.84 | 0.44 | 0.32 | 0.00 | 3.1 | 0.004 | 0.80 | 0.0 | 0.05 | 18.30 | 0.00 | 2.038 | 13.99 | 2.31 | 5.9 | 94.1 | 0.0 | -1.29 | 1.56 | 0.75 | 0.80 | 1.57 | 53719 | 6454 | 26 | 95 | 8 | 0 | 0 | logfile |
✔ | 7FDB | 31539 | 2022-12-13 | 2021-07-16 | 4.8 | 5.04 | 4.73 | 8.8 | 0.003 | 0.57 | 0.0 | 0.04 | 13.84 | 0.00 | 1.761 | 12.65 | 0.00 | 7.3 | 92.6 | 0.0 | -0.78 | 0.66 | 0.32 | — | 4.7 | 0.004 | 0.86 | 1.0 | 0.05 | 13.79 | 0.01 | 1.984 | 28.58 | 0.01 | 7.4 | 92.5 | 0.0 | -1.72 | 2.25 | 0.77 | 0.68 | — | 64497 | 8295 | 31 | 0 | 0 | 0 | 0 | logfile |