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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7N9Y | 24264 | 2023-02-18 | 2021-06-18 | 4.8 | 4.30 | — | 2.2 | 0.019 | 1.07 | 0.0 | 0.00 | 6.04 | 0.00 | 2.538 | 0.59 | 0.00 | 8.5 | 91.1 | 0.3 | -1.98 | 0.49 | 0.33 | — | 2.2 | 0.003 | 1.01 | 0.0 | 0.00 | 4.45 | 0.00 | 2.547 | 7.13 | 0.00 | 19.3 | 80.3 | 0.4 | -4.00 | 2.62 | 0.52 | 0.31 | — | 7515 | 2505 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 6oFJ | 20047 | 2023-02-19 | 2019-03-30 | 4.5 | 5.60 | 3.27 | 7.8 | 0.007 | 0.96 | 0.0 | 0.05 | 15.74 | 0.01 | 2.135 | 3.69 | 0.00 | 7.1 | 92.9 | 0.0 | -4.36 | 0.48 | 0.33 | — | 7.8 | 0.002 | 0.58 | 0.0 | 0.04 | 14.03 | 0.00 | 2.002 | 10.00 | 0.00 | 8.7 | 91.3 | 0.0 | -1.93 | 1.22 | 0.56 | 0.54 | — | 10310 | 650 | 2 | 0 | 0 | 0 | 5142 | logfile |
✔ | 8E5P | 27917 | 2023-02-23 | 2022-08-22 | 4.4 | 9.89 | 6.01 | 8.2 | 0.003 | 0.64 | 0.0 | 0.04 | 11.32 | 0.00 | 1.299 | 26.66 | 1.63 | 1.3 | 98.4 | 0.3 | -0.83 | 0.61 | 0.33 | — | 8.2 | 0.003 | 0.69 | 0.0 | 0.04 | 11.81 | 0.00 | 1.266 | 18.73 | 0.00 | 2.8 | 97.2 | 0.0 | 0.85 | 1.53 | 0.85 | 0.77 | — | 20038 | 2502 | 13 | 8 | 18 | 0 | 0 | logfile |
✔ | 7URi | 26713 | 2023-02-16 | 2022-04-22 | 2.6 | 2.67 | 2.95 | 2.6 | 0.009 | 1.37 | 0.0 | 0.12 | 25.77 | 0.01 | 2.201 | 7.31 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.05 | 0.34 | — | 2.6 | 0.008 | 1.44 | 0.0 | 0.07 | 23.84 | 0.01 | 2.072 | 23.68 | 0.00 | 0.0 | 0.0 | 0.0 | — | 2.06 | 0.08 | 0.38 | — | 1905 | 0 | 1 | 90 | 0 | 0 | 0 | logfile |
✔ | 7Uo0 | 26636 | 2023-02-19 | 2022-04-12 | 3.4 | 4.47 | — | 3.5 | 0.003 | 2.23 | 0.0 | 0.11 | 24.66 | 0.00 | 2.117 | 7.29 | 2.04 | 6.4 | 93.6 | 0.0 | -0.20 | 0.73 | 0.34 | 1.64 | 3.4 | 0.004 | 0.89 | 0.0 | 0.04 | 26.78 | 0.01 | 2.050 | 25.40 | 1.02 | 10.0 | 90.0 | 0.0 | -3.19 | 5.62 | 0.84 | 0.62 | 1.35 | 10697 | 112 | 4 | 455 | 7 | 0 | 0 | logfile |
✔ | 7NJ3 | 12371 | 2023-02-26 | 2021-02-15 | 4.48 | 4.72 | — | 4.6 | 0.004 | 0.70 | 1.0 | 0.05 | 13.64 | 0.00 | 1.907 | 8.92 | 0.38 | 4.2 | 95.8 | 0.0 | -0.73 | 0.57 | 0.36 | — | 4.6 | 0.006 | 0.81 | 0.0 | 0.04 | 13.81 | 0.01 | 1.754 | 25.03 | 0.00 | 8.4 | 91.6 | 0.0 | -2.08 | 2.79 | 0.72 | 0.62 | — | 28778 | 1795 | 6 | 23 | 0 | 0 | 13868 | logfile |
✔ | 7VQ2 | 32083 | 2023-02-24 | 2021-10-18 | 3.68 | 4.07 | — | 3.9 | 0.009 | 0.83 | 0.0 | 0.05 | 12.14 | 0.00 | 2.297 | 6.39 | 1.27 | 4.8 | 93.8 | 1.4 | -3.35 | 0.54 | 0.36 | 1.21 | 4.0 | 0.003 | 0.63 | 0.0 | 0.04 | 14.54 | 0.00 | 1.949 | 10.63 | 0.56 | 6.6 | 93.4 | 0.0 | 0.80 | 1.32 | 0.73 | 0.65 | 1.26 | 23340 | 1416 | 4 | 0 | 0 | 0 | 11764 | logfile |
✔ | 6PLQ | 20372 | 2023-02-21 | 2019-07-01 | 3.4 | 4.30 | — | 4.3 | 0.001 | 0.46 | 0.0 | 0.04 | 7.10 | 0.00 | 2.285 | 5.97 | 0.00 | 2.0 | 98.0 | 0.0 | -4.40 | 0.57 | 0.36 | 0.62 | 3.9 | 0.004 | 1.00 | 0.0 | 0.05 | 14.57 | 0.00 | 2.135 | 15.79 | 0.58 | 4.9 | 95.1 | 0.0 | -1.08 | 1.74 | 0.72 | 0.74 | 0.99 | 14240 | 1730 | 15 | 0 | 20 | 0 | 0 | logfile |
✔ | 7FJo | 31625 | 2023-02-26 | 2021-08-04 | 3.34 | 3.72 | — | 3.5 | 0.012 | 1.56 | 4.0 | 0.09 | 12.63 | 0.02 | 1.277 | 9.35 | 3.26 | 7.2 | 92.4 | 0.4 | -1.06 | 0.55 | 0.36 | 0.19 | 3.5 | 0.005 | 0.75 | 1.0 | 0.05 | 14.55 | 0.00 | 2.122 | 10.66 | 0.26 | 5.0 | 94.9 | 0.1 | -0.24 | 1.91 | 0.78 | 0.82 | 1.93 | 28547 | 3640 | 12 | 0 | 25 | 0 | 0 | logfile |
✔ | 7KQE | 22997 | 2023-02-26 | 2020-11-15 | 2.88 | 3.80 | 2.90 | 3.4 | 0.012 | 1.80 | 8.0 | 0.10 | 13.99 | 0.01 | 2.478 | 0.25 | 1.08 | 6.3 | 93.6 | 0.1 | -1.09 | 0.73 | 0.37 | 2.42 | 2.9 | 0.003 | 0.59 | 0.0 | 0.04 | 14.25 | 0.00 | 2.025 | 4.48 | 0.77 | 4.4 | 95.6 | 0.0 | -0.11 | 0.67 | 0.87 | 0.83 | 2.31 | 68370 | 4467 | 9 | 0 | 0 | 0 | 33744 | logfile |
✔ | 8E5L | 27914 | 2023-02-23 | 2022-08-22 | 4.2 | 8.91 | 5.82 | 7.6 | 0.003 | 0.64 | 0.0 | 0.04 | 11.68 | 0.00 | 1.299 | 26.62 | 1.63 | 1.3 | 98.4 | 0.3 | -0.83 | 0.63 | 0.37 | — | 7.5 | 0.002 | 0.65 | 0.0 | 0.04 | 12.02 | 0.00 | 1.046 | 16.48 | 0.00 | 2.4 | 97.6 | 0.0 | 0.49 | 1.33 | 0.89 | 0.83 | — | 20058 | 2502 | 13 | 9 | 18 | 0 | 0 | logfile |
✔ | 7XZX | 33533 | 2023-02-23 | 2022-06-03 | 4.53 | 5.42 | 4.49 | 4.5 | 0.006 | 0.99 | 0.0 | 0.06 | 25.64 | 0.00 | 1.688 | 10.77 | 0.15 | 1.7 | 98.3 | 0.0 | 0.69 | 0.69 | 0.37 | — | 4.4 | 0.004 | 0.65 | 0.0 | 0.04 | 25.63 | 0.00 | 2.095 | 14.00 | 0.00 | 2.6 | 97.4 | 0.0 | 1.09 | 1.71 | 0.90 | 0.82 | — | 19270 | 1554 | 14 | 342 | 0 | 0 | 0 | logfile |
✔ | 6UE9 | 20751 | 2023-02-22 | 2019-09-20 | 2.9 | 3.89 | — | 4.2 | 0.007 | 1.04 | 0.0 | 0.06 | 13.76 | 0.01 | 2.241 | 3.10 | 0.32 | 11.2 | 88.8 | 0.0 | -3.87 | 0.59 | 0.37 | 0.26 | 3.6 | 0.004 | 0.96 | 0.0 | 0.05 | 15.93 | 0.01 | 2.142 | 12.09 | 4.21 | 7.7 | 92.3 | 0.0 | -1.60 | 1.71 | 0.78 | 0.80 | 1.58 | 18227 | 2475 | 17 | 0 | 12 | 0 | 0 | logfile |
✔ | 7V9C | 31815 | 2023-02-24 | 2021-08-24 | 4.5 | 3.01 | 4.36 | 3.5 | 0.002 | 0.44 | 0.0 | 0.03 | 28.95 | 0.00 | 2.240 | 8.56 | 1.27 | 5.0 | 94.1 | 0.9 | -0.37 | 0.60 | 0.38 | — | 2.9 | 0.006 | 0.86 | 0.0 | 0.04 | 29.58 | 0.01 | 2.063 | 26.21 | 0.40 | 5.8 | 93.9 | 0.3 | -0.16 | 1.78 | 0.73 | 0.58 | — | 23228 | 1518 | 18 | 546 | 0 | 0 | 0 | logfile |
✔ | 7Pii | 13437 | 2023-02-20 | 2021-08-19 | 2.68 | 2.39 | — | 2.7 | 0.010 | 0.78 | 0.0 | 0.05 | 28.29 | 0.00 | 2.229 | 8.23 | 0.31 | 4.0 | 96.0 | 0.0 | -0.89 | 0.51 | 0.38 | 3.69 | 2.6 | 0.004 | 0.66 | 0.0 | 0.04 | 29.02 | 0.00 | 2.175 | 7.79 | 2.33 | 2.8 | 97.2 | 0.0 | 1.88 | 0.98 | 0.81 | 0.88 | 3.36 | 11192 | 779 | 12 | 245 | 0 | 0 | 0 | logfile |
✔ | 7W0F | 32241 | 2023-02-21 | 2021-11-18 | 4.55 | 8.43 | — | 7.5 | 0.003 | 0.64 | 1.0 | 0.04 | 14.12 | 0.00 | 1.356 | 21.15 | 1.19 | 4.4 | 94.7 | 0.8 | -0.94 | 0.71 | 0.38 | — | 7.4 | 0.003 | 0.66 | 0.0 | 0.04 | 14.18 | 0.00 | 2.160 | 18.40 | 0.00 | 5.1 | 94.9 | 0.1 | -0.71 | 1.00 | 0.87 | 0.70 | — | 14097 | 1492 | 6 | 94 | 0 | 0 | 0 | logfile |
✔ | 7M3L | 23656 | 2023-02-17 | 2021-03-18 | 3.2 | 4.99 | — | 3.3 | 0.009 | 0.97 | 0.0 | 0.06 | 15.05 | 0.01 | 1.551 | 6.78 | 0.30 | 9.1 | 90.6 | 0.3 | -3.19 | 0.29 | 0.38 | 0.40 | 3.1 | 0.004 | 0.72 | 0.0 | 0.04 | 15.15 | 0.00 | 2.043 | 15.39 | 0.30 | 7.0 | 92.8 | 0.1 | -0.73 | 3.83 | 0.46 | 0.76 | 1.89 | 6113 | 775 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 7R5R | 14334 | 2023-02-20 | 2022-02-11 | 2.44 | 3.05 | — | 2.9 | 0.004 | 0.66 | 0.0 | 0.04 | 27.14 | 0.00 | 2.226 | 6.02 | 0.31 | 2.5 | 97.5 | 0.0 | -0.10 | 0.59 | 0.39 | 3.60 | 2.8 | 0.014 | 0.90 | 0.0 | 0.04 | 28.54 | 0.01 | 2.131 | 5.12 | 1.71 | 3.6 | 96.4 | 0.0 | 1.78 | 0.94 | 0.81 | 0.87 | 3.25 | 11625 | 779 | 12 | 266 | 0 | 0 | 0 | logfile |
✔ | 6MWQ | 9277 | 2023-02-24 | 2018-10-30 | 3.0 | 3.33 | 2.89 | 3.1 | 0.001 | 0.36 | 0.0 | 0.04 | 4.66 | 0.00 | 2.321 | 4.19 | 0.13 | 11.0 | 87.5 | 1.5 | -4.81 | 0.54 | 0.39 | 0.22 | 3.1 | 0.003 | 0.72 | 0.0 | 0.04 | 13.43 | 0.00 | 2.152 | 8.38 | 1.78 | 4.1 | 95.7 | 0.2 | -1.12 | 1.34 | 0.78 | 0.87 | 1.94 | 22072 | 2873 | 8 | 0 | 0 | 0 | 0 | logfile |
✔ | 5A63 | 3061 | 2023-02-19 | 2015-06-24 | 3.4 | 3.50 | 3.42 | 3.5 | 0.010 | 1.68 | 8.0 | 0.11 | 19.25 | 0.01 | 2.079 | 39.51 | 13.74 | 6.4 | 91.5 | 2.1 | -0.17 | 0.36 | 0.40 | 2.09 | 3.5 | 0.004 | 0.75 | 0.0 | 0.05 | 17.83 | 0.00 | 2.195 | 13.49 | 0.48 | 5.9 | 93.7 | 0.3 | -0.03 | 3.23 | 0.62 | 0.82 | 2.08 | 10003 | 1223 | 13 | 0 | 22 | 0 | 0 | logfile |