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Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7U6V | 26381 | 2023-08-13 | 2022-03-06 | 4.1 | 3.17 | 4.21 | 6.8 | 0.002 | 0.52 | 0.0 | 0.04 | 13.79 | 0.00 | 1.948 | 13.74 | 1.57 | 4.7 | 95.3 | 0.0 | -0.16 | 0.64 | 0.29 | — | 6.8 | 0.002 | 0.50 | 0.0 | 0.04 | 13.89 | 0.00 | 1.956 | 14.79 | 1.75 | 6.1 | 93.9 | 0.0 | -0.54 | 0.42 | 0.82 | 0.72 | — | 9997 | 637 | 14 | 0 | 0 | 23 | 4901 | logfile |
✔ | 5Li4 | 4052 | 2023-08-16 | 2016-07-14 | 4.2 | 5.13 | — | 4.0 | 0.053 | 3.07 | 114.0 | 0.34 | 14.44 | 0.02 | 0.111 | 93.07 | 2.94 | 14.0 | 79.1 | 6.9 | -4.32 | 0.24 | 0.30 | — | 4.1 | 0.004 | 1.04 | 0.0 | 0.05 | 13.71 | 0.01 | 1.950 | 32.75 | 0.09 | 15.2 | 83.8 | 1.0 | -3.85 | 4.19 | 0.34 | 0.58 | — | 20070 | 2562 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 7NKC | 12437 | 2023-08-20 | 2021-02-17 | 4.46 | 4.76 | — | 4.6 | 0.004 | 0.72 | 0.0 | 0.04 | 13.69 | 0.01 | 1.795 | 9.79 | 0.25 | 4.3 | 95.7 | 0.1 | -0.76 | 0.51 | 0.30 | — | 4.7 | 0.003 | 0.68 | 0.0 | 0.04 | 14.11 | 0.00 | 1.766 | 20.02 | 0.00 | 6.1 | 93.9 | 0.0 | -0.83 | 1.94 | 0.64 | 0.52 | — | 28788 | 1795 | 6 | 23 | 0 | 0 | 13868 | logfile |
✔ | 5G2X | 3331 | 2023-08-15 | 2016-04-16 | 3.8 | 3.49 | — | 3.4 | 0.001 | 0.32 | 0.0 | 0.02 | 11.56 | 0.00 | 2.219 | 4.36 | 0.45 | 19.7 | 74.4 | 5.9 | -5.72 | 0.51 | 0.30 | -0.09 | 3.3 | 0.005 | 0.87 | 0.0 | 0.04 | 19.17 | 0.01 | 1.949 | 36.81 | 0.45 | 21.6 | 77.1 | 1.3 | -5.19 | 1.94 | 0.80 | 0.66 | 0.50 | 19072 | 487 | 3 | 704 | 0 | 0 | 0 | logfile |
✔ | 7Q1Z | 13776 | 2023-08-17 | 2021-10-22 | 3.4 | 2.41 | — | 4.0 | 0.004 | 0.61 | 0.0 | 0.04 | 12.71 | 0.00 | 2.074 | 6.27 | 0.04 | 2.2 | 97.8 | 0.0 | 0.60 | 0.48 | 0.31 | -0.02 | 2.1 | 0.006 | 0.85 | 0.0 | 0.05 | 15.89 | 0.01 | 2.073 | 12.66 | 0.94 | 4.4 | 95.6 | 0.0 | -0.31 | 1.64 | 0.75 | 0.76 | 1.74 | 23694 | 2916 | 21 | 0 | 63 | 0 | 0 | logfile |
✘ | 7JMH | 22394 | 2023-08-14 | 2020-07-31 | 4.5 | 5.68 | — | 4.4 | 0.005 | 1.02 | 0.0 | 0.05 | 10.48 | 0.01 | 1.373 | 9.43 | 0.46 | 11.7 | 88.2 | 0.1 | -4.60 | 0.56 | 0.31 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 120756 | 13500 | 12 | 0 | 3608 | 0 | 0 | logfile |
✔ | 7Ao8 | 11837 | 2023-08-12 | 2020-10-14 | 4.5 | 5.23 | 4.51 | 3.6 | 0.011 | 1.51 | 8.0 | 0.26 | 16.21 | 0.01 | 1.219 | 8.80 | 4.18 | 6.9 | 92.5 | 0.6 | -3.46 | 0.62 | 0.31 | — | 3.6 | 0.002 | 0.66 | 0.0 | 0.04 | 14.05 | 0.00 | 1.997 | 16.46 | 0.00 | 3.1 | 96.9 | 0.0 | -0.64 | 2.63 | 0.85 | 0.72 | — | 10905 | 1350 | 9 | 0 | 8 | 0 | 0 | logfile |
✘ | 7JMJ | 22396 | 2023-08-14 | 2020-07-31 | 4.5 | 5.51 | — | 4.3 | 0.007 | 1.08 | 0.0 | 0.05 | 10.58 | 0.01 | 1.373 | 9.90 | 0.62 | 11.3 | 88.5 | 0.3 | -4.67 | 0.56 | 0.31 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 120756 | 13500 | 12 | 0 | 3608 | 0 | 0 | logfile |
✔ | 7TMC | 25995 | 2023-08-09 | 2022-01-19 | 3.25 | 3.24 | 2.95 | 4.2 | 0.005 | 0.72 | 0.0 | 0.07 | 14.28 | 0.01 | 2.152 | 13.78 | 0.00 | 9.5 | 90.5 | 0.0 | -4.08 | 0.21 | 0.31 | -0.39 | 3.4 | 0.005 | 0.89 | 0.0 | 0.07 | 17.14 | 0.01 | 2.144 | 18.47 | 0.53 | 12.0 | 88.0 | 0.0 | -4.18 | 1.94 | 0.36 | 0.76 | 3.09 | 3426 | 405 | 6 | 0 | 12 | 0 | 0 | logfile |
✔ | 6CS1 | 7579 | 2023-08-18 | 2018-03-19 | 4.6 | 4.79 | 4.84 | 6.8 | 0.006 | 0.92 | 0.0 | 0.06 | 8.77 | 0.01 | 2.229 | 7.26 | 0.00 | 7.2 | 92.8 | 0.0 | -4.20 | 0.61 | 0.31 | — | 4.6 | 0.007 | 1.10 | 1.0 | 0.06 | 11.78 | 0.01 | 1.900 | 35.89 | 0.00 | 11.7 | 88.3 | 0.0 | -3.21 | 1.93 | 0.71 | 0.58 | — | 25995 | 3202 | 27 | 0 | 75 | 0 | 0 | logfile |
✔ | 6HD5 | 0201 | 2023-08-11 | 2018-08-17 | 4.8 | 6.01 | — | 5.9 | 0.001 | 0.40 | 0.0 | 0.03 | 8.70 | 0.00 | 2.289 | 4.36 | 0.10 | 10.5 | 88.4 | 1.1 | -1.81 | 0.36 | 0.32 | — | 5.9 | 0.004 | 0.81 | 0.0 | 0.04 | 11.92 | 0.01 | 2.072 | 21.86 | 0.00 | 6.4 | 93.5 | 0.1 | -0.40 | 2.04 | 0.46 | 0.56 | — | 9707 | 1234 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 8F7J | 28905 | 2023-08-09 | 2022-11-18 | 4.32 | 4.45 | 4.63 | 8.9 | 0.005 | 0.92 | 0.0 | 0.05 | 15.44 | 0.01 | 2.282 | 15.12 | 0.26 | 5.7 | 94.3 | 0.0 | -3.18 | 0.38 | 0.32 | — | 4.3 | 0.004 | 0.80 | 0.0 | 0.04 | 13.92 | 0.01 | 2.122 | 24.96 | 0.00 | 9.4 | 90.6 | 0.0 | -3.21 | 2.94 | 0.44 | 0.45 | — | 3321 | 407 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 6RWE | 10038 | 2023-08-09 | 2019-06-04 | 3.0 | 3.12 | — | 3.7 | 0.009 | 1.02 | 1.0 | 0.06 | 13.12 | 0.01 | 1.975 | 6.33 | 0.73 | 7.4 | 92.5 | 0.1 | -4.84 | 0.44 | 0.32 | 0.00 | 3.1 | 0.008 | 1.06 | 0.0 | 0.06 | 18.26 | 0.01 | 1.845 | 18.12 | 2.92 | 7.6 | 92.3 | 0.0 | -2.05 | 2.44 | 0.76 | 0.81 | 1.72 | 53719 | 6454 | 26 | 95 | 8 | 0 | 0 | logfile |
✔ | 6i1X | 0326 | 2023-08-10 | 2018-10-30 | 3.7 | 3.83 | — | 3.8 | 0.013 | 1.81 | 34.0 | 0.10 | 14.94 | 0.01 | 0.458 | 50.06 | 4.35 | 7.5 | 90.6 | 1.9 | -3.51 | 0.50 | 0.32 | 0.28 | 3.8 | 0.003 | 0.77 | 0.0 | 0.05 | 16.37 | 0.00 | 2.134 | 17.07 | 0.28 | 4.8 | 95.0 | 0.2 | -0.88 | 1.06 | 0.65 | 0.60 | 0.83 | 54915 | 7290 | 15 | 0 | 0 | 0 | 0 | logfile |
✘ | 5UCY | 8539 | 2023-08-18 | 2016-12-22 | 4.6 | 4.99 | — | 4.6 | 0.011 | 1.21 | 3.0 | 0.06 | 13.21 | 0.01 | 0.244 | 89.25 | 0.68 | 11.3 | 88.3 | 0.5 | -4.47 | 0.50 | 0.32 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 24990 | 2610 | 12 | 3 | 6 | 0 | 4452 | logfile |
✔ | 6YW7 | 10960 | 2023-08-09 | 2020-04-29 | 4.5 | 5.21 | — | 4.7 | 0.021 | 3.50 | 0.0 | 0.09 | 6.70 | 0.01 | 2.034 | 2.17 | 0.00 | 4.5 | 94.7 | 0.9 | -1.45 | 0.57 | 0.32 | — | 4.6 | 0.003 | 1.01 | 0.0 | 0.02 | 5.70 | 0.00 | 2.420 | 14.13 | 0.00 | 13.2 | 86.6 | 0.2 | -3.90 | 6.17 | 0.81 | 0.75 | — | 5426 | 1788 | 9 | 0 | 2 | 0 | 0 | logfile |
✔ | 6YRG | 10889 | 2023-08-17 | 2020-04-20 | 4.8 | 6.94 | — | 7.9 | 0.009 | 1.41 | 18.0 | 0.08 | 13.69 | 0.01 | 1.270 | 31.61 | 0.48 | 9.4 | 90.3 | 0.3 | -2.26 | 0.66 | 0.32 | — | 7.9 | 0.003 | 0.74 | 0.0 | 0.04 | 13.07 | 0.00 | 2.157 | 15.69 | 0.00 | 9.7 | 90.2 | 0.1 | -1.41 | 3.45 | 0.74 | 0.50 | — | 21992 | 2736 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 7FDB | 31539 | 2023-08-12 | 2021-07-16 | 4.8 | 5.04 | 4.73 | 8.8 | 0.003 | 0.57 | 0.0 | 0.04 | 13.84 | 0.00 | 1.761 | 12.61 | 0.00 | 7.3 | 92.6 | 0.0 | -0.78 | 0.66 | 0.32 | — | 4.7 | 0.004 | 0.88 | 0.0 | 0.05 | 13.87 | 0.01 | 2.001 | 29.12 | 0.03 | 7.7 | 92.3 | 0.0 | -1.80 | 2.25 | 0.77 | 0.68 | — | 64497 | 8295 | 31 | 0 | 0 | 0 | 0 | logfile |
✔ | 8DWi | 27755 | 2023-08-09 | 2022-08-01 | 3.4 | 4.06 | 3.58 | 4.1 | 0.003 | 0.63 | 0.0 | 0.04 | 13.02 | 0.01 | 2.258 | 7.44 | 0.00 | 5.0 | 95.0 | 0.0 | 0.29 | 0.28 | 0.33 | -0.40 | 4.0 | 0.003 | 0.74 | 0.0 | 0.04 | 16.17 | 0.01 | 2.113 | 11.24 | 0.64 | 5.0 | 95.0 | 0.0 | -0.32 | 1.76 | 0.49 | 0.73 | 1.52 | 3192 | 424 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 7UiF | 26544 | 2023-08-12 | 2022-03-29 | 4.6 | 5.63 | 4.34 | 6.7 | 0.004 | 0.69 | 0.0 | 0.05 | 13.63 | 0.01 | 0.850 | 9.76 | 0.06 | 1.9 | 98.0 | 0.1 | 0.62 | 0.48 | 0.33 | — | 6.7 | 0.003 | 0.75 | 0.0 | 0.05 | 13.27 | 0.00 | 2.026 | 20.55 | 0.00 | 3.5 | 96.5 | 0.0 | 0.05 | 1.21 | 0.61 | 0.62 | — | 63137 | 7857 | 33 | 0 | 0 | 0 | 0 | logfile |