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Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 8AZS | 15770 | 2022-12-12 | 2022-09-06 | 2.9 | 2.78 | 2.55 | 2.8 | 0.011 | 1.50 | 0.0 | 0.12 | 16.09 | 0.01 | 0.017 | 1346.55 | 0.00 | 3.1 | 96.9 | 0.0 | -1.98 | 0.27 | 0.40 | 5.06 | 3.3 | 0.027 | 3.71 | 25.0 | 0.19 | 25.02 | 0.02 | 1.804 | 345.70 | 17.56 | 51.6 | 42.5 | 5.9 | -8.21 | 18.78 | 0.21 | 0.21 | 0.44 | 9036 | 1224 | 36 | 0 | 0 | 0 | 0 | logfile |
✔ | 5X59 | 6704 | 2022-12-15 | 2017-02-15 | 3.7 | 3.77 | — | 3.7 | 0.011 | 1.65 | 0.0 | 0.08 | 14.81 | 0.01 | 1.477 | 23.41 | 4.97 | 13.2 | 85.4 | 1.3 | -3.87 | 0.48 | 0.41 | 0.15 | 3.7 | 0.004 | 1.05 | 0.0 | 0.05 | 15.67 | 0.01 | 2.059 | 19.91 | 0.21 | 12.7 | 87.1 | 0.2 | -2.29 | 1.26 | 0.60 | 0.64 | 1.20 | 26838 | 3423 | 6 | 0 | 30 | 0 | 0 | logfile |
✔ | 7oCK | 12809 | 2022-12-16 | 2021-04-27 | 3.6 | 5.02 | — | 8.3 | 0.008 | 0.86 | 0.0 | 0.05 | 14.98 | 0.01 | 1.988 | 36.55 | 0.20 | 7.7 | 92.1 | 0.2 | -2.93 | 0.80 | 0.41 | -0.16 | 5.6 | 0.004 | 0.93 | 0.0 | 0.05 | 16.79 | 0.01 | 2.043 | 31.81 | 0.23 | 6.0 | 94.0 | 0.1 | -1.28 | 1.43 | 0.87 | 0.64 | -0.08 | 28276 | 3666 | 12 | 0 | 0 | 0 | 0 | logfile |
✔ | 7R4R | 14315 | 2022-12-22 | 2022-02-09 | 3.9 | 4.20 | — | 6.8 | 0.036 | 4.11 | 135.0 | 0.31 | 17.82 | 0.03 | 1.228 | 59.98 | 7.44 | 8.5 | 91.3 | 0.2 | -3.20 | 0.62 | 0.41 | -0.13 | 5.6 | 0.006 | 1.46 | 18.0 | 0.24 | 16.78 | 0.01 | 1.756 | 47.98 | 2.02 | 11.3 | 88.6 | 0.1 | -2.93 | 1.31 | 0.69 | 0.62 | -0.05 | 50505 | 3293 | 12 | 0 | 43 | 0 | 24171 | logfile |
✔ | 7MLV | 23911 | 2022-12-13 | 2021-04-29 | 4.1 | 4.82 | — | 3.9 | 0.004 | 0.98 | 0.0 | 0.06 | 11.47 | 0.01 | 2.168 | 5.10 | 0.00 | 7.1 | 92.9 | 0.0 | -5.14 | 0.62 | 0.41 | — | 3.9 | 0.004 | 0.77 | 0.0 | 0.04 | 12.41 | 0.00 | 2.107 | 22.33 | 0.00 | 9.0 | 91.0 | 0.0 | -3.06 | 1.67 | 0.70 | 0.70 | — | 15055 | 1919 | 16 | 0 | 22 | 0 | 0 | logfile |
✔ | 8E5o | 27916 | 2022-12-20 | 2022-08-22 | 4.4 | 5.37 | 4.31 | 3.8 | 0.010 | 1.17 | 3.0 | 0.07 | 15.06 | 0.01 | 1.211 | 13.45 | 4.25 | 8.8 | 90.5 | 0.7 | -4.35 | 0.69 | 0.41 | — | 3.3 | 0.002 | 0.60 | 0.0 | 0.04 | 13.60 | 0.00 | 1.919 | 36.45 | 0.00 | 5.9 | 94.0 | 0.1 | -0.26 | 1.76 | 0.90 | 0.77 | — | 39229 | 3350 | 10 | 87 | 3 | 0 | 11229 | logfile |
✔ | 7NKi | 12440 | 2022-12-16 | 2021-02-18 | 4.67 | 4.96 | — | 4.6 | 0.004 | 0.67 | 0.0 | 0.04 | 13.49 | 0.01 | 1.908 | 8.85 | 0.00 | 4.0 | 96.0 | 0.0 | -0.64 | 0.67 | 0.41 | — | 4.6 | 0.004 | 0.71 | 0.0 | 0.04 | 14.08 | 0.01 | 1.877 | 24.40 | 0.00 | 7.5 | 92.5 | 0.0 | -1.33 | 2.36 | 0.80 | 0.65 | — | 28775 | 1794 | 6 | 23 | 0 | 0 | 13868 | logfile |
✔ | 6G90 | 4364 | 2022-12-13 | 2018-04-10 | 4.0 | 4.12 | — | 3.9 | 0.009 | 1.30 | 2.0 | 0.07 | 12.62 | 0.03 | 1.687 | 19.08 | 0.57 | 7.8 | 91.4 | 0.8 | -3.55 | 0.51 | 0.41 | — | 3.9 | 0.004 | 0.90 | 0.0 | 0.04 | 15.17 | 0.01 | 2.031 | 18.36 | 0.29 | 7.4 | 92.3 | 0.3 | -0.88 | 3.85 | 0.57 | 0.57 | — | 65050 | 6796 | 43 | 474 | 223 | 0 | 0 | logfile |
✔ | 8D6X | 27225 | 2022-12-14 | 2022-06-06 | 3.2 | 10.22 | — | — | 0.003 | 0.62 | 0.0 | 0.04 | 12.14 | 0.00 | 2.195 | 17.80 | 0.06 | 2.6 | 97.4 | 0.0 | 1.17 | 0.70 | 0.42 | 0.14 | — | 0.003 | 0.70 | 0.0 | 0.04 | 14.56 | 0.00 | 2.047 | 30.78 | 0.28 | 5.0 | 95.0 | 0.0 | 0.03 | 4.65 | 0.60 | 0.35 | 0.08 | 68362 | 8957 | 41 | 0 | 0 | 0 | 0 | logfile |
✔ | 7U5S | 26357 | 2022-12-21 | 2022-03-02 | 4.16 | 3.37 | 4.30 | 4.2 | 0.008 | 1.02 | 0.0 | 0.06 | 14.83 | 0.01 | 2.265 | 9.16 | 0.00 | 6.0 | 94.0 | 0.0 | -4.93 | 0.57 | 0.42 | — | 4.1 | 0.003 | 0.78 | 0.0 | 0.05 | 13.45 | 0.00 | 2.110 | 16.92 | 0.00 | 5.0 | 95.0 | 0.0 | -1.27 | 1.05 | 0.65 | 0.61 | — | 23086 | 3006 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 6JXA | 9892 | 2022-12-13 | 2019-04-23 | 4.3 | 4.65 | — | 4.2 | 0.017 | 1.81 | 3.0 | 0.10 | 9.08 | 0.01 | 1.926 | 29.80 | 2.04 | 12.2 | 79.3 | 8.5 | -2.72 | 0.49 | 0.42 | — | 4.2 | 0.003 | 0.90 | 0.0 | 0.04 | 11.48 | 0.00 | 2.173 | 16.33 | 0.00 | 15.8 | 81.5 | 2.7 | -1.63 | 0.94 | 0.65 | 0.62 | — | 14100 | 2244 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 6HDD | 0204 | 2022-12-16 | 2018-08-17 | 4.5 | 5.28 | — | 4.4 | 0.009 | 1.36 | 3.0 | 0.08 | 12.60 | 0.01 | 2.220 | 12.08 | 1.07 | 18.3 | 81.6 | 0.1 | -6.11 | 0.74 | 0.42 | — | 8.5 | 0.004 | 1.01 | 0.0 | 0.05 | 13.22 | 0.01 | 1.497 | 26.00 | 0.00 | 17.4 | 82.2 | 0.4 | -3.46 | 5.55 | 0.82 | 0.49 | — | 28154 | 3605 | 7 | 0 | 0 | 0 | 0 | logfile |
✔ | 7CQ7 | 30438 | 2022-12-13 | 2020-08-08 | 3.55 | 3.95 | — | 4.0 | 0.008 | 1.07 | 0.0 | 0.06 | 10.32 | 0.01 | 1.915 | 5.84 | 0.07 | 9.3 | 90.7 | 0.0 | -4.47 | 0.39 | 0.42 | 0.13 | 3.9 | 0.003 | 0.85 | 0.0 | 0.04 | 15.09 | 0.00 | 2.105 | 13.99 | 0.54 | 6.9 | 93.1 | 0.0 | -0.82 | 1.30 | 0.50 | 0.68 | -0.06 | 13810 | 1766 | 8 | 0 | 9 | 0 | 0 | logfile |
✔ | 7WD9 | 32435 | 2022-12-14 | 2021-12-21 | 3.7 | 4.02 | — | 3.8 | 0.003 | 0.45 | 0.0 | 0.04 | 7.35 | 0.00 | 1.967 | 2.83 | 0.00 | 4.2 | 95.6 | 0.1 | -1.79 | 0.57 | 0.42 | 0.74 | 3.8 | 0.004 | 0.66 | 0.0 | 0.04 | 13.67 | 0.00 | 1.862 | 13.06 | 0.38 | 6.6 | 93.2 | 0.1 | -0.95 | 1.33 | 0.75 | 0.69 | 1.01 | 69720 | 4533 | 9 | 0 | 0 | 0 | 34404 | logfile |
✔ | 6FU8 | 4319 | 2022-12-11 | 2018-02-26 | 3.2 | 4.43 | 2.97 | 3.8 | 0.013 | 2.11 | 2.0 | 0.10 | 20.18 | 0.02 | 2.617 | 1.47 | 2.78 | 11.2 | 86.2 | 2.5 | -3.87 | 0.17 | 0.42 | 2.23 | 4.1 | 0.003 | 0.82 | 0.0 | 0.04 | 14.91 | 0.00 | 2.261 | 15.40 | 0.00 | 10.0 | 88.8 | 1.2 | -1.84 | 3.11 | 0.23 | 0.62 | -0.89 | 1364 | 82 | 1 | 0 | 0 | 0 | 711 | logfile |
✔ | 7X2A | 32963 | 2022-12-16 | 2022-02-25 | 2.49 | 2.71 | — | 1.8 | 0.013 | 1.51 | 6.0 | 0.11 | 12.93 | 0.00 | 1.682 | 7.02 | 6.68 | 2.2 | 97.6 | 0.2 | 2.33 | 0.57 | 0.42 | 1.04 | 1.8 | 0.006 | 0.86 | 0.0 | 0.05 | 15.39 | 0.01 | 1.938 | 15.62 | 2.61 | 4.1 | 95.8 | 0.1 | -0.35 | 1.80 | 0.83 | 0.80 | 2.16 | 26800 | 3486 | 5 | 0 | 0 | 0 | 0 | logfile |
✔ | 7JGF | 22325 | 2022-12-11 | 2020-07-19 | 4.69 | 4.81 | — | 4.8 | 0.002 | 0.62 | 0.0 | 0.04 | 13.16 | 0.01 | 2.109 | 26.85 | 0.41 | 4.6 | 95.4 | 0.0 | -0.87 | 0.39 | 0.43 | — | 4.7 | 0.002 | 0.54 | 0.0 | 0.04 | 13.15 | 0.00 | 2.122 | 55.35 | 0.41 | 7.3 | 92.7 | 0.0 | 0.66 | 0.66 | 0.42 | 0.46 | — | 4477 | 532 | 1 | 0 | 0 | 0 | 30 | logfile |
✔ | 6XTB | 10618 | 2022-12-11 | 2020-01-15 | 4.3 | 4.32 | — | 3.9 | 0.006 | 1.17 | 0.0 | 0.07 | 8.68 | 0.00 | 2.369 | 3.00 | 0.00 | 15.6 | 84.4 | 0.0 | -4.66 | 0.32 | 0.43 | — | 4.1 | 0.004 | 1.06 | 0.0 | 0.05 | 7.90 | 0.00 | 2.205 | 9.62 | 0.00 | 22.1 | 77.9 | 0.0 | -5.53 | 2.43 | 0.34 | 0.64 | — | 1161 | 235 | 1 | 0 | 0 | 0 | 0 | logfile |
✘ | 6D00 | 7782 | 2022-12-20 | 2018-04-09 | 4.0 | 3.65 | — | 3.0 | 0.001 | 0.45 | 0.0 | 0.04 | 9.42 | 0.00 | 2.284 | 4.03 | 0.05 | 6.5 | 92.8 | 0.7 | -4.95 | 0.62 | 0.43 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 38328 | 4824 | 12 | 0 | 12 | 0 | 0 | logfile |
✔ | 7XoB | 33343 | 2022-12-18 | 2022-05-01 | 3.3 | 2.37 | 3.36 | 2.1 | 0.005 | 0.91 | 12.0 | 0.08 | 13.68 | 0.01 | 1.329 | 8.16 | 0.57 | 4.9 | 95.0 | 0.2 | -3.07 | 0.57 | 0.43 | 1.44 | 2.1 | 0.004 | 0.75 | 0.0 | 0.05 | 16.33 | 0.00 | 2.077 | 11.56 | 0.57 | 4.9 | 95.1 | 0.0 | -0.95 | 1.25 | 0.74 | 0.78 | 2.13 | 34108 | 4260 | 10 | 0 | 39 | 0 | 0 | logfile |