The table shows a selection of parameters. Activate more columns using
the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7SAM | 24952 | 2024-03-10 | 2021-09-22 | 4.3 | 6.95 | 4.38 | 4.2 | 0.001 | 0.39 | 0.0 | 0.02 | 23.50 | 0.00 | 1.952 | 2.96 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.84 | 0.51 | — | 4.3 | 0.006 | 0.88 | 0.0 | 0.04 | 28.37 | 0.01 | 1.818 | 83.35 | 0.00 | 0.0 | 0.0 | 0.0 | — | 5.72 | 0.95 | 0.87 | — | 5399 | 0 | 1 | 169 | 0 | 0 | 1802 | logfile |
✔ | 8HD6 | 34670 | 2024-03-11 | 2022-11-03 | 3.73 | 4.52 | 3.73 | 3.2 | 0.002 | 0.54 | 0.0 | 0.02 | 23.56 | 0.00 | 1.969 | 2.97 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.90 | 0.78 | — | 3.3 | 0.008 | 0.89 | 0.0 | 0.05 | 25.51 | 0.01 | 1.715 | 29.97 | 0.00 | 0.0 | 0.0 | 0.0 | — | 2.18 | 0.91 | 0.83 | — | 8980 | 0 | 1 | 419 | 25 | 0 | 0 | logfile |
✔ | 6PC5 | 20296 | 2024-03-16 | 2019-06-16 | 2.7 | 3.05 | — | 2.9 | 0.006 | 0.44 | 1.0 | 0.02 | 23.60 | 0.02 | 1.965 | 2.72 | 1.57 | 6.1 | 93.8 | 0.1 | -3.49 | 0.73 | 0.88 | 5.14 | 2.9 | 0.005 | 0.64 | 1.0 | 0.03 | 23.69 | 0.01 | 2.063 | 7.48 | 4.33 | 6.1 | 93.7 | 0.2 | -1.09 | 1.24 | 0.74 | 0.91 | 4.40 | 72206 | 971 | 9 | 3015 | 1 | 0 | 0 | logfile |
✔ | 6WYV | 21969 | 2024-03-16 | 2020-05-13 | 2.75 | 3.18 | — | 3.0 | 0.006 | 0.48 | 1.0 | 0.02 | 23.73 | 0.02 | 1.925 | 3.89 | 1.57 | 7.1 | 92.8 | 0.1 | -4.66 | 0.70 | 0.84 | 3.35 | 3.0 | 0.005 | 0.67 | 1.0 | 0.03 | 23.92 | 0.01 | 2.012 | 11.06 | 6.16 | 8.3 | 91.6 | 0.1 | -1.86 | 1.52 | 0.71 | 0.88 | 3.09 | 72194 | 971 | 9 | 3015 | 1 | 0 | 0 | logfile |
✔ | 5G2X | 3331 | 2024-03-17 | 2016-04-16 | 3.8 | 3.49 | — | 3.4 | 0.001 | 0.32 | 0.0 | 0.02 | 21.03 | 0.00 | 2.219 | 4.36 | 0.45 | 19.7 | 74.4 | 5.9 | -5.72 | 0.51 | 0.30 | -0.09 | 3.3 | 0.007 | 1.02 | 0.0 | 0.05 | 25.19 | 0.01 | 1.900 | 45.40 | 4.54 | 22.7 | 76.1 | 1.3 | -5.20 | 2.37 | 0.80 | 0.67 | 0.25 | 19072 | 487 | 3 | 704 | 0 | 0 | 0 | logfile |
✔ | 7oDS | 12846 | 2024-03-10 | 2021-04-30 | 3.1 | 3.32 | — | 3.1 | 0.002 | 0.40 | 0.0 | 0.03 | 16.51 | 0.02 | 2.009 | 5.03 | 0.51 | 1.2 | 98.8 | 0.0 | 0.91 | 0.78 | 0.76 | 2.42 | 3.1 | 0.006 | 0.78 | 0.0 | 0.04 | 18.50 | 0.01 | 1.746 | 12.18 | 2.31 | 3.3 | 96.7 | 0.0 | 0.26 | 1.68 | 0.80 | 0.80 | 2.31 | 108339 | 9371 | 67 | 1487 | 132 | 0 | 0 | logfile |
✔ | 8EUi | 24423 | 2024-03-14 | 2022-10-18 | 3.1 | 3.13 | — | 3.1 | 0.004 | 0.52 | 0.0 | 0.03 | 21.91 | 0.00 | 2.143 | 7.87 | 0.18 | 3.8 | 96.2 | 0.1 | -0.02 | 0.82 | 0.81 | 3.11 | 3.1 | 0.003 | 0.55 | 0.0 | 0.04 | 21.64 | 0.00 | 2.066 | 8.66 | 1.87 | 3.9 | 96.1 | 0.0 | 0.36 | 0.28 | 0.82 | 0.82 | 2.64 | 122892 | 7155 | 47 | 3131 | 1 | 0 | 0 | logfile |
✔ | 7QWR | 14192 | 2024-03-17 | 2022-01-25 | 2.9 | 2.44 | — | 2.9 | 0.002 | 0.47 | 0.0 | 0.03 | 22.87 | 0.00 | 2.054 | 7.58 | 0.72 | 5.1 | 94.8 | 0.1 | -0.61 | 0.48 | 0.71 | 2.26 | 2.7 | 0.008 | 0.94 | 0.0 | 0.05 | 24.15 | 0.01 | 1.795 | 9.20 | 6.93 | 7.3 | 92.6 | 0.1 | -1.29 | 1.42 | 0.53 | 0.82 | 2.98 | 134576 | 6621 | 55 | 3769 | 126 | 0 | 0 | logfile |
✔ | 8EV3 | 24421 | 2024-03-18 | 2022-10-19 | 3.0 | 3.06 | — | 3.0 | 0.003 | 0.48 | 0.0 | 0.03 | 22.00 | 0.00 | 2.194 | 8.85 | 2.43 | 3.6 | 96.4 | 0.1 | 0.09 | 0.76 | 0.75 | 2.84 | 3.0 | 0.006 | 0.62 | 0.0 | 0.04 | 21.78 | 0.00 | 2.064 | 11.50 | 3.51 | 4.2 | 95.8 | 0.1 | 0.49 | 1.09 | 0.76 | 0.76 | 2.71 | 84746 | 6605 | 42 | 1677 | 1 | 0 | 0 | logfile |
✔ | 8EUG | 24412 | 2024-03-14 | 2022-10-18 | 2.8 | 2.82 | — | 2.8 | 0.005 | 0.53 | 0.0 | 0.03 | 22.17 | 0.00 | 2.091 | 7.67 | 0.47 | 3.5 | 96.2 | 0.3 | -0.23 | 0.81 | 0.81 | 3.22 | 2.8 | 0.005 | 0.71 | 1.0 | 0.04 | 21.97 | 0.01 | 1.934 | 9.71 | 2.13 | 4.3 | 95.5 | 0.2 | -0.02 | 0.29 | 0.82 | 0.82 | 3.13 | 123162 | 7108 | 47 | 3138 | 1 | 0 | 0 | logfile |
✔ | 8ESR | 24422 | 2024-03-12 | 2022-10-14 | 3.2 | 3.24 | — | 3.0 | 0.002 | 0.47 | 0.0 | 0.03 | 21.68 | 0.00 | 2.118 | 7.71 | 0.28 | 3.0 | 96.9 | 0.1 | 0.71 | 0.76 | 0.74 | 2.20 | 3.0 | 0.002 | 0.52 | 0.0 | 0.03 | 21.26 | 0.00 | 2.101 | 10.03 | 1.95 | 3.3 | 96.6 | 0.1 | 1.22 | 0.34 | 0.77 | 0.77 | 2.05 | 116762 | 9286 | 57 | 2372 | 1 | 0 | 0 | logfile |
✔ | 7NFX | 12303 | 2024-03-24 | 2021-02-08 | 3.2 | 3.29 | — | 3.3 | 0.002 | 0.53 | 0.0 | 0.03 | 23.45 | 0.00 | 2.097 | 8.82 | 3.98 | 4.9 | 95.0 | 0.1 | 0.36 | 0.55 | 0.78 | 2.57 | 3.2 | 0.006 | 0.72 | 0.0 | 0.04 | 23.78 | 0.01 | 1.956 | 10.79 | 4.36 | 6.7 | 93.2 | 0.1 | -0.32 | 0.59 | 0.58 | 0.85 | 2.41 | 148232 | 7672 | 62 | 4018 | 30 | 0 | 0 | logfile |
✔ | 7V99 | 31811 | 2024-03-16 | 2021-08-24 | 3.54 | 4.33 | — | 3.3 | 0.002 | 0.53 | 0.0 | 0.03 | 20.83 | 0.00 | 2.258 | 7.85 | 0.10 | 5.9 | 94.1 | 0.1 | -3.21 | 0.79 | 0.68 | 0.93 | 3.3 | 0.002 | 0.59 | 0.0 | 0.03 | 21.18 | 0.00 | 2.191 | 12.80 | 1.60 | 5.9 | 94.0 | 0.1 | -0.17 | 1.38 | 0.82 | 0.76 | 0.55 | 14582 | 1170 | 5 | 249 | 0 | 0 | 0 | logfile |
✔ | 6NF8 | 9362 | 2024-03-13 | 2018-12-19 | 3.48 | 3.99 | — | 3.6 | 0.001 | 0.39 | 0.0 | 0.03 | 17.55 | 0.00 | 1.916 | 3.08 | 0.58 | 10.4 | 88.3 | 1.3 | -2.53 | 0.76 | 0.60 | 1.16 | 3.5 | 0.003 | 0.68 | 0.0 | 0.04 | 19.55 | 0.00 | 2.086 | 13.55 | 2.24 | 5.6 | 94.4 | 0.0 | -0.33 | 2.61 | 0.84 | 0.80 | 1.14 | 65776 | 5509 | 32 | 952 | 147 | 0 | 0 | logfile |
✔ | 8HAM | 34596 | 2024-03-17 | 2022-10-26 | 4.5 | 4.52 | 4.33 | 3.7 | 0.003 | 0.56 | 0.0 | 0.03 | 25.16 | 0.00 | 2.260 | 9.62 | 0.00 | 1.4 | 98.6 | 0.0 | 2.08 | 0.84 | 0.77 | — | 3.7 | 0.003 | 0.59 | 0.0 | 0.03 | 26.47 | 0.00 | 2.202 | 13.46 | 0.00 | 2.1 | 97.9 | 0.0 | 2.15 | 2.21 | 0.87 | 0.84 | — | 17177 | 1288 | 11 | 330 | 0 | 0 | 0 | logfile |
✔ | 7V9A | 31813 | 2024-03-17 | 2021-08-24 | 3.94 | 3.46 | — | 3.4 | 0.002 | 0.58 | 0.0 | 0.03 | 18.98 | 0.00 | 2.260 | 6.87 | 0.00 | 5.2 | 94.8 | 0.0 | -4.05 | 0.66 | 0.57 | 0.34 | 3.1 | 0.003 | 0.69 | 0.0 | 0.04 | 20.41 | 0.00 | 2.189 | 13.18 | 3.05 | 8.2 | 91.8 | 0.0 | -2.00 | 1.87 | 0.72 | 0.68 | 1.06 | 16876 | 1723 | 10 | 146 | 0 | 0 | 0 | logfile |
✔ | 7MVY | 24058 | 2024-03-20 | 2021-05-15 | 2.39 | 3.24 | 1.97 | 3.1 | 0.002 | 0.39 | 0.0 | 0.03 | 6.61 | 0.00 | 2.209 | 3.28 | 0.00 | 0.7 | 99.3 | 0.0 | -0.54 | 0.72 | 0.64 | 0.92 | 3.0 | 0.005 | 0.64 | 0.0 | 0.04 | 13.95 | 0.00 | 1.975 | 12.80 | 2.22 | 3.6 | 96.4 | 0.0 | 1.22 | 1.63 | 0.76 | 0.74 | 2.06 | 26555 | 1694 | 2 | 0 | 0 | 0 | 13337 | logfile |
✔ | 8ETC | 24398 | 2024-03-19 | 2022-10-16 | 3.1 | 3.22 | — | 3.1 | 0.002 | 0.53 | 0.0 | 0.03 | 22.41 | 0.00 | 2.067 | 10.42 | 0.70 | 3.9 | 95.9 | 0.2 | -0.30 | 0.65 | 0.60 | 0.73 | 3.1 | 0.005 | 0.70 | 0.0 | 0.04 | 22.61 | 0.00 | 2.023 | 15.76 | 2.90 | 4.9 | 95.0 | 0.1 | -0.42 | 0.95 | 0.72 | 0.71 | 1.73 | 95651 | 6128 | 43 | 2287 | 1 | 0 | 0 | logfile |
✔ | 7NAF | 24271 | 2024-03-17 | 2021-06-21 | 3.13 | 3.14 | 3.06 | 3.1 | 0.005 | 0.62 | 0.0 | 0.03 | 21.37 | 0.01 | 2.172 | 7.07 | 0.00 | 4.2 | 95.8 | 0.0 | 0.43 | 0.70 | 0.78 | 3.17 | 3.1 | 0.003 | 0.58 | 0.0 | 0.03 | 21.60 | 0.00 | 2.141 | 7.36 | 1.63 | 4.9 | 95.1 | 0.0 | 0.10 | 0.30 | 0.71 | 0.81 | 3.01 | 18868 | 1342 | 17 | 378 | 0 | 2 | 0 | logfile |
✔ | 6HD5 | 0201 | 2024-03-14 | 2018-08-17 | 4.8 | 6.01 | — | 5.9 | 0.001 | 0.40 | 0.0 | 0.03 | 8.70 | 0.00 | 2.289 | 4.36 | 0.10 | 10.5 | 88.4 | 1.1 | -1.81 | 0.36 | 0.32 | — | 5.9 | 0.004 | 0.81 | 0.0 | 0.04 | 12.06 | 0.00 | 2.092 | 22.70 | 0.00 | 6.5 | 93.4 | 0.1 | -0.69 | 2.09 | 0.46 | 0.57 | — | 9707 | 1234 | 3 | 0 | 0 | 0 | 0 | logfile |