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Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7PGQ | 13392 | 2023-07-14 | 2021-08-15 | 3.5 | 3.89 | 3.50 | 3.6 | 0.003 | 0.45 | 0.0 | 0.03 | 10.46 | 0.00 | 1.905 | 3.80 | 0.91 | 1.2 | 98.8 | 0.0 | -0.24 | 0.81 | 0.79 | 1.38 | 3.6 | 0.002 | 0.54 | 0.0 | 0.03 | 12.83 | 0.00 | 2.038 | 5.60 | 0.17 | 3.3 | 96.6 | 0.1 | 1.23 | 0.73 | 0.81 | 0.79 | 1.31 | 31508 | 1970 | 3 | 0 | 2 | 0 | 15807 | logfile |
✔ | 8ET7 | 28587 | 2023-07-04 | 2022-10-16 | 3.77 | 4.05 | 3.85 | 4.0 | 0.003 | 0.49 | 0.0 | 0.03 | 10.93 | 0.00 | 2.342 | 3.90 | 0.24 | 3.2 | 96.8 | 0.0 | 1.90 | 0.49 | 0.70 | 1.68 | 4.0 | 0.004 | 0.60 | 0.0 | 0.03 | 15.59 | 0.00 | 1.890 | 9.26 | 0.24 | 6.0 | 94.0 | 0.0 | 0.87 | 1.50 | 0.50 | 0.73 | 1.36 | 8111 | 532 | 3 | 0 | 3 | 0 | 4007 | logfile |
✔ | 6ZLG | 11265 | 2023-07-15 | 2020-06-30 | 3.0 | 3.18 | — | 3.1 | 0.003 | 0.44 | 0.0 | 0.03 | 16.50 | 0.00 | 2.180 | 7.56 | 4.15 | 0.1 | 99.9 | 0.0 | 1.26 | 0.80 | 0.87 | 2.98 | 3.1 | 0.003 | 0.40 | 0.0 | 0.03 | 17.92 | 0.00 | 2.131 | 6.27 | 3.28 | 1.6 | 98.4 | 0.0 | 5.28 | 1.17 | 0.82 | 0.90 | 2.58 | 33008 | 4072 | 24 | 0 | 0 | 0 | 0 | logfile |
✔ | 8G88 | 29843 | 2023-07-07 | 2023-02-17 | 4.8 | 7.18 | 4.63 | 3.2 | 0.004 | 0.60 | 0.0 | 0.03 | 28.10 | 0.00 | 2.275 | 7.12 | 0.93 | 1.0 | 99.0 | 0.0 | 1.45 | 0.78 | 0.60 | — | 3.2 | 0.006 | 0.68 | 0.0 | 0.04 | 29.42 | 0.00 | 2.075 | 29.38 | 0.00 | 2.5 | 97.5 | 0.0 | 1.55 | 2.54 | 0.91 | 0.81 | — | 13995 | 891 | 11 | 336 | 0 | 0 | 0 | logfile |
✔ | 7E9C | 31029 | 2023-07-11 | 2021-03-04 | 3.5 | 4.28 | 3.62 | 4.0 | 0.003 | 0.58 | 0.0 | 0.03 | 26.96 | 0.00 | 2.221 | 12.74 | 0.14 | 3.3 | 96.7 | 0.0 | 0.16 | 0.78 | 0.69 | 0.28 | 4.0 | 0.005 | 0.69 | 0.0 | 0.04 | 28.49 | 0.01 | 2.118 | 20.22 | 1.24 | 5.0 | 95.0 | 0.0 | -0.18 | 1.64 | 0.83 | 0.79 | 0.82 | 12338 | 898 | 11 | 260 | 0 | 0 | 0 | logfile |
✔ | 6XMF | 22257 | 2023-07-04 | 2020-06-30 | 3.1 | 3.28 | — | 3.3 | 0.002 | 0.56 | 0.0 | 0.03 | 16.46 | 0.00 | 2.246 | 8.60 | 0.00 | 6.8 | 93.2 | 0.0 | -1.78 | 0.68 | 0.71 | 2.25 | 3.2 | 0.003 | 0.60 | 0.0 | 0.03 | 17.60 | 0.00 | 2.155 | 15.19 | 0.40 | 9.1 | 90.9 | 0.0 | -0.44 | 0.47 | 0.70 | 0.76 | 2.47 | 7382 | 627 | 3 | 109 | 1 | 0 | 0 | logfile |
✔ | 8EXA | 28656 | 2023-07-03 | 2022-10-25 | 3.14 | 3.45 | 3.09 | 3.4 | 0.004 | 0.54 | 0.0 | 0.03 | 17.45 | 0.00 | 2.223 | 15.79 | 0.40 | 3.6 | 96.4 | 0.0 | 0.27 | 0.61 | 0.69 | 4.07 | 3.4 | 0.003 | 0.52 | 0.0 | 0.03 | 17.87 | 0.00 | 2.219 | 16.00 | 1.21 | 3.6 | 96.4 | 0.0 | 0.46 | 1.14 | 0.60 | 0.68 | 3.76 | 5539 | 341 | 4 | 139 | 0 | 0 | 0 | logfile |
✔ | 6ENJ | 3899 | 2023-07-21 | 2017-10-05 | 3.7 | 3.76 | — | 3.7 | 0.003 | 0.61 | 0.0 | 0.03 | 14.08 | 0.01 | 1.234 | 4.06 | 0.06 | 8.4 | 91.3 | 0.3 | -4.96 | 0.77 | 0.77 | 1.43 | 3.7 | 0.007 | 0.84 | 0.0 | 0.04 | 16.60 | 0.01 | 2.028 | 18.23 | 1.34 | 12.8 | 86.9 | 0.3 | -3.13 | 1.77 | 0.80 | 0.81 | 1.43 | 147111 | 5950 | 56 | 4693 | 0 | 0 | 0 | logfile |
✔ | 6T9L | 10415 | 2023-07-09 | 2019-10-28 | 3.6 | 3.74 | 3.53 | 3.6 | 0.002 | 0.47 | 0.0 | 0.03 | 22.54 | 0.00 | 2.136 | 7.11 | 0.07 | 1.1 | 98.9 | 0.0 | -1.63 | 0.74 | 0.68 | 0.82 | 3.6 | 0.003 | 0.61 | 0.0 | 0.04 | 24.88 | 0.00 | 2.026 | 8.92 | 0.30 | 2.4 | 97.6 | 0.0 | 1.15 | 0.81 | 0.84 | 0.83 | 1.11 | 18157 | 1532 | 18 | 290 | 8 | 0 | 0 | logfile |
✔ | 7Sii | 25142 | 2023-07-10 | 2021-10-14 | 3.45 | 3.63 | — | 3.6 | 0.008 | 0.74 | 0.0 | 0.03 | 13.14 | 0.00 | 2.220 | 5.25 | 2.21 | 2.9 | 97.1 | 0.0 | 2.94 | 0.64 | 0.79 | 2.61 | 3.6 | 0.004 | 0.55 | 0.0 | 0.03 | 15.31 | 0.00 | 2.106 | 7.44 | 0.46 | 3.0 | 97.0 | 0.0 | 2.33 | 0.51 | 0.66 | 0.83 | 1.88 | 20484 | 1286 | 8 | 0 | 4 | 0 | 10184 | logfile |
✔ | 6V3B | 21032 | 2023-07-16 | 2019-11-25 | 2.91 | 3.09 | — | 3.0 | 0.002 | 0.51 | 0.0 | 0.03 | 14.38 | 0.01 | 1.895 | 5.92 | 0.05 | 2.9 | 97.1 | 0.1 | -1.21 | 0.83 | 0.83 | 2.56 | 3.0 | 0.008 | 0.78 | 0.0 | 0.05 | 16.16 | 0.01 | 1.664 | 7.19 | 3.52 | 5.3 | 94.6 | 0.1 | -0.34 | 1.58 | 0.86 | 0.89 | 2.58 | 140290 | 5457 | 76 | 4535 | 95 | 398 | 0 | logfile |
✔ | 8CVi | 27008 | 2023-07-07 | 2022-05-18 | 3.4 | 3.54 | 3.20 | 3.4 | 0.003 | 0.49 | 0.0 | 0.03 | 13.53 | 0.00 | 2.073 | 8.79 | 0.05 | 4.0 | 95.9 | 0.1 | 1.49 | 0.55 | 0.83 | 1.22 | 3.4 | 0.003 | 0.58 | 1.0 | 0.04 | 16.27 | 0.00 | 2.023 | 10.85 | 0.42 | 4.0 | 96.0 | 0.0 | 3.71 | 2.21 | 0.58 | 0.84 | 0.83 | 66030 | 8856 | 33 | 0 | 0 | 0 | 0 | logfile |
✔ | 6V39 | 21030 | 2023-07-17 | 2019-11-25 | 3.04 | 3.20 | — | 3.1 | 0.002 | 0.49 | 0.0 | 0.03 | 14.66 | 0.02 | 1.895 | 6.19 | 0.00 | 2.5 | 97.4 | 0.1 | -1.02 | 0.86 | 0.85 | 2.53 | 3.1 | 0.003 | 0.62 | 0.0 | 0.03 | 16.06 | 0.01 | 1.821 | 8.08 | 0.56 | 4.2 | 95.7 | 0.1 | 0.18 | 1.17 | 0.87 | 0.88 | 2.71 | 141897 | 5458 | 70 | 4615 | 116 | 273 | 0 | logfile |
✔ | 6XMG | 22258 | 2023-07-04 | 2020-06-30 | 4.8 | 8.26 | — | 3.9 | 0.002 | 0.53 | 0.0 | 0.03 | 16.06 | 0.00 | 2.187 | 10.77 | 0.00 | 6.7 | 93.3 | 0.0 | -2.01 | 0.90 | 0.74 | — | 3.5 | 0.004 | 0.78 | 0.0 | 0.04 | 18.81 | 0.01 | 2.001 | 46.91 | 0.20 | 11.0 | 89.0 | 0.0 | -2.08 | 0.78 | 0.90 | 0.78 | — | 8361 | 638 | 4 | 154 | 1 | 0 | 0 | logfile |
✔ | 5LY6 | 4118 | 2023-07-03 | 2016-09-24 | 4.5 | 4.72 | — | 4.3 | 0.006 | 1.24 | 0.0 | 0.03 | 24.28 | 0.02 | 1.526 | 94.62 | 36.32 | 20.9 | 74.2 | 4.9 | -5.32 | 0.34 | 0.59 | — | 4.4 | 0.003 | 0.77 | 0.0 | 0.04 | 13.91 | 0.00 | 2.223 | 14.60 | 0.00 | 8.3 | 91.5 | 0.2 | -2.31 | 3.59 | 0.40 | 0.76 | — | 3725 | 471 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 7MVU | 24056 | 2023-07-12 | 2021-05-15 | 3.77 | 4.87 | 3.73 | 4.0 | 0.002 | 0.36 | 0.0 | 0.03 | 6.38 | 0.00 | 2.187 | 3.55 | 0.00 | 1.1 | 98.9 | 0.0 | -0.33 | 0.85 | 0.73 | 0.19 | 4.0 | 0.003 | 0.58 | 0.0 | 0.03 | 11.75 | 0.00 | 1.882 | 11.93 | 0.22 | 3.2 | 96.8 | 0.0 | 2.54 | 2.06 | 0.88 | 0.82 | 0.36 | 25645 | 1604 | 2 | 0 | 0 | 0 | 12841 | logfile |
✔ | 7Q2Z | 13786 | 2023-07-04 | 2021-10-26 | 3.2 | 2.91 | 3.15 | 3.2 | 0.002 | 0.48 | 0.0 | 0.03 | 18.78 | 0.00 | 2.227 | 4.26 | 0.00 | 6.5 | 93.4 | 0.1 | -1.44 | 0.67 | 0.80 | 2.05 | 3.2 | 0.003 | 0.54 | 0.0 | 0.03 | 19.97 | 0.00 | 2.121 | 3.33 | 0.00 | 2.8 | 97.1 | 0.1 | 2.11 | 1.23 | 0.70 | 0.86 | 1.84 | 8258 | 902 | 4 | 46 | 0 | 0 | 0 | logfile |
✔ | 7oTC | 13058 | 2023-07-22 | 2021-06-10 | 2.9 | 3.10 | — | 3.1 | 0.005 | 0.71 | 1.0 | 0.03 | 13.78 | 0.02 | 1.846 | 9.04 | 0.04 | 3.6 | 96.3 | 0.1 | -0.49 | 0.73 | 0.80 | 2.51 | 3.1 | 0.004 | 0.65 | 0.0 | 0.04 | 14.62 | 0.01 | 1.907 | 10.46 | 2.80 | 3.5 | 96.5 | 0.0 | -0.30 | 1.17 | 0.78 | 0.86 | 2.50 | 147132 | 6239 | 64 | 4557 | 305 | 0 | 0 | logfile |
✔ | 7oQZ | 13035 | 2023-07-04 | 2021-06-04 | 3.27 | 3.59 | 3.75 | 3.8 | 0.009 | 0.98 | 0.0 | 0.03 | 13.71 | 0.00 | 2.257 | 3.35 | 0.51 | 1.3 | 98.7 | 0.0 | 4.83 | 0.61 | 0.78 | 2.67 | 3.8 | 0.004 | 0.75 | 0.0 | 0.04 | 17.35 | 0.00 | 2.109 | 11.10 | 1.15 | 3.1 | 96.9 | 0.0 | 3.11 | 0.81 | 0.63 | 0.81 | 2.23 | 7996 | 948 | 8 | 0 | 16 | 0 | 0 | logfile |
✔ | 7o5H | 12736 | 2023-07-16 | 2021-04-08 | 3.1 | 2.93 | 3.04 | 2.8 | 0.002 | 0.33 | 0.0 | 0.03 | 12.30 | 0.00 | 1.262 | 5.88 | 0.98 | 2.1 | 97.9 | 0.0 | 1.09 | 0.86 | 0.83 | 1.84 | 2.8 | 0.006 | 0.66 | 0.0 | 0.04 | 14.74 | 0.01 | 1.068 | 13.97 | 0.56 | 3.6 | 96.4 | 0.0 | 0.01 | 1.48 | 0.87 | 0.85 | 1.32 | 34436 | 1730 | 22 | 964 | 167 | 0 | 0 | logfile |