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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7ToX | 26040 | 2022-04-07 | 2022-01-24 | 3.62 | 4.01 | — | 3.6 | 0.013 | 1.75 | 1.0 | 0.10 | 13.49 | 0.01 | 2.515 | 0.14 | 1.35 | 6.7 | 92.8 | 0.5 | -1.12 | 0.85 | 0.84 | 2.42 | 3.6 | 0.005 | 0.64 | 0.0 | 0.04 | 14.17 | 0.00 | 2.141 | 7.45 | 0.08 | 5.3 | 94.6 | 0.1 | -0.05 | 0.49 | 0.85 | 0.85 | 2.00 | 24618 | 3041 | 20 | 0 | 61 | 0 | 0 | logfile |
✔ | 7TPH | 26055 | 2022-04-06 | 2022-01-25 | 3.58 | 4.03 | — | 3.6 | 0.013 | 1.75 | 5.0 | 0.09 | 12.22 | 0.01 | 2.501 | 0.14 | 1.01 | 7.2 | 92.3 | 0.6 | -1.01 | 0.84 | 0.85 | 3.36 | 3.6 | 0.004 | 0.58 | 0.0 | 0.04 | 12.78 | 0.00 | 2.203 | 4.83 | 0.00 | 5.1 | 94.8 | 0.1 | 0.30 | 1.93 | 0.84 | 0.86 | 2.46 | 22180 | 2912 | 14 | 0 | 52 | 0 | 0 | logfile |
✔ | 7QWM | 14189 | 2022-04-04 | 2022-01-25 | 2.76 | 2.21 | 2.43 | 2.2 | 0.012 | 1.93 | 3.0 | 0.11 | 13.26 | 0.01 | 2.502 | 0.15 | 0.00 | 8.0 | 92.0 | 0.0 | -2.89 | 0.34 | 0.80 | 6.86 | 2.2 | 0.004 | 0.70 | 0.0 | 0.05 | 18.21 | 0.00 | 2.103 | 9.69 | 0.53 | 6.8 | 93.2 | 0.0 | -2.77 | 0.60 | 0.38 | 0.82 | 6.27 | 3255 | 405 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 7LD1 | 23279 | 2022-04-07 | 2021-01-12 | 3.4 | 4.18 | — | 3.7 | 0.012 | 1.92 | 8.0 | 0.10 | 12.73 | 0.01 | 2.514 | 0.15 | 2.35 | 9.2 | 89.2 | 1.6 | -2.21 | 0.84 | 0.79 | 2.71 | 3.7 | 0.006 | 0.75 | 0.0 | 0.05 | 13.20 | 0.00 | 2.103 | 8.20 | 0.25 | 8.5 | 91.4 | 0.0 | -1.07 | 0.55 | 0.85 | 0.83 | 2.27 | 29456 | 4251 | 27 | 0 | 67 | 0 | 0 | logfile |
✔ | 7THE | 25893 | 2022-04-04 | 2022-01-10 | 3.79 | 4.06 | 3.94 | 4.0 | 0.013 | 1.88 | 0.0 | 0.11 | 13.70 | 0.02 | 2.548 | 0.15 | 0.00 | 8.2 | 91.8 | 0.0 | -2.01 | 0.67 | 0.75 | 3.24 | 4.0 | 0.004 | 0.79 | 0.0 | 0.05 | 16.02 | 0.00 | 2.183 | 17.13 | 0.83 | 7.0 | 93.0 | 0.0 | -1.23 | 0.72 | 0.68 | 0.75 | 2.31 | 3305 | 423 | 4 | 0 | 1 | 0 | 0 | logfile |
✔ | 7KDi | 22823 | 2022-04-06 | 2020-10-08 | 3.26 | 3.83 | — | 3.7 | 0.013 | 1.69 | 2.0 | 0.09 | 12.53 | 0.01 | 2.522 | 0.15 | 0.27 | 6.1 | 93.8 | 0.1 | -0.76 | 0.79 | 0.78 | 3.13 | 3.7 | 0.005 | 0.65 | 0.0 | 0.04 | 14.07 | 0.00 | 2.173 | 6.42 | 0.24 | 4.6 | 95.3 | 0.0 | 0.10 | 0.66 | 0.80 | 0.80 | 2.60 | 23688 | 2916 | 21 | 0 | 63 | 0 | 0 | logfile |
✔ | 7QK2 | 14029 | 2022-04-04 | 2021-12-17 | 2.61 | 2.61 | 2.37 | 2.7 | 0.011 | 1.86 | 10.0 | 0.11 | 10.81 | 0.01 | 2.499 | 0.15 | 0.00 | 4.1 | 95.9 | 0.0 | -1.51 | 0.37 | 0.86 | 6.04 | 2.7 | 0.003 | 0.65 | 0.0 | 0.05 | 17.08 | 0.00 | 2.113 | 4.53 | 2.96 | 2.7 | 97.3 | 0.0 | -1.83 | 1.72 | 0.37 | 0.87 | 5.30 | 3246 | 426 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 7M0J | 23612 | 2022-04-06 | 2021-03-11 | 3.52 | 3.78 | — | 3.7 | 0.013 | 1.87 | 1.0 | 0.10 | 13.97 | 0.01 | 2.528 | 0.15 | 1.68 | 7.4 | 92.2 | 0.5 | -2.03 | 0.77 | 0.78 | 2.38 | 3.7 | 0.004 | 0.65 | 0.0 | 0.04 | 15.19 | 0.00 | 2.110 | 9.57 | 0.20 | 4.3 | 95.7 | 0.0 | -0.19 | 1.31 | 0.78 | 0.80 | 2.25 | 22827 | 2916 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 7LWi | 23546 | 2022-04-07 | 2021-03-01 | 3.07 | 3.28 | — | 3.2 | 0.013 | 1.78 | 4.0 | 0.09 | 12.99 | 0.01 | 2.482 | 0.15 | 0.31 | 5.6 | 94.2 | 0.2 | -1.24 | 0.72 | 0.74 | 3.32 | 3.2 | 0.003 | 0.64 | 0.0 | 0.04 | 14.88 | 0.01 | 2.107 | 5.66 | 0.00 | 3.3 | 96.6 | 0.1 | 0.35 | 1.66 | 0.72 | 0.79 | 2.22 | 23847 | 3003 | 6 | 0 | 30 | 0 | 0 | logfile |
✔ | 7ToU | 26038 | 2022-04-07 | 2022-01-24 | 3.24 | 3.49 | — | 3.3 | 0.013 | 1.81 | 8.0 | 0.11 | 13.36 | 0.01 | 2.517 | 0.16 | 1.20 | 6.2 | 93.2 | 0.7 | -1.00 | 0.84 | 0.85 | 3.52 | 3.3 | 0.003 | 0.60 | 0.0 | 0.04 | 13.84 | 0.00 | 2.148 | 5.27 | 0.11 | 4.3 | 95.7 | 0.0 | 0.42 | 0.58 | 0.85 | 0.87 | 2.72 | 24687 | 3050 | 20 | 0 | 61 | 0 | 0 | logfile |
✔ | 7N5F | 24188 | 2022-04-04 | 2021-06-05 | 2.7 | 2.27 | 2.74 | 2.0 | 0.023 | 1.50 | 0.0 | 0.10 | 9.99 | 0.01 | 2.468 | 0.16 | 0.00 | 1.3 | 98.7 | 0.0 | 1.68 | 0.36 | 0.75 | 3.32 | 1.7 | 0.003 | 0.56 | 0.0 | 0.04 | 17.43 | 0.00 | 2.324 | 7.74 | 0.95 | 1.3 | 98.7 | 0.0 | 2.60 | 0.79 | 0.35 | 0.77 | 3.26 | 3037 | 386 | 1 | 0 | 1 | 0 | 0 | logfile |
✔ | 7KE6 | 22832 | 2022-04-06 | 2020-10-10 | 3.1 | 3.68 | — | 3.6 | 0.013 | 1.75 | 4.0 | 0.10 | 13.65 | 0.01 | 2.558 | 0.17 | 1.02 | 6.5 | 93.2 | 0.3 | -1.42 | 0.78 | 0.77 | 3.34 | 3.5 | 0.003 | 0.63 | 0.0 | 0.04 | 14.65 | 0.00 | 2.154 | 6.18 | 0.27 | 3.7 | 96.3 | 0.0 | 0.25 | 1.26 | 0.75 | 0.78 | 2.56 | 23688 | 2916 | 21 | 0 | 63 | 0 | 0 | logfile |
✔ | 7N5G | 24189 | 2022-04-04 | 2021-06-05 | 2.4 | 2.16 | 2.42 | 1.5 | 0.022 | 1.51 | 0.0 | 0.09 | 10.57 | 0.01 | 2.386 | 0.17 | 0.00 | 0.8 | 99.2 | 0.0 | 1.84 | 0.40 | 0.79 | 3.64 | 1.5 | 0.003 | 0.56 | 0.0 | 0.04 | 16.74 | 0.00 | 2.228 | 4.78 | 2.28 | 1.4 | 98.6 | 0.0 | 2.95 | 1.21 | 0.39 | 0.80 | 2.58 | 2926 | 371 | 1 | 0 | 1 | 0 | 0 | logfile |
✔ | 7LWL | 23549 | 2022-04-07 | 2021-03-01 | 2.84 | 3.04 | — | 3.0 | 0.013 | 1.79 | 4.0 | 0.09 | 12.83 | 0.01 | 2.499 | 0.17 | 0.19 | 4.3 | 95.4 | 0.3 | -0.71 | 0.72 | 0.79 | 3.92 | 3.0 | 0.005 | 0.74 | 0.0 | 0.05 | 15.06 | 0.00 | 2.131 | 5.70 | 0.99 | 3.0 | 97.0 | 0.0 | 0.43 | 0.61 | 0.72 | 0.84 | 3.36 | 23847 | 3003 | 6 | 0 | 30 | 0 | 0 | logfile |
✔ | 7LWV | 23558 | 2022-04-06 | 2021-03-01 | 3.12 | 3.34 | — | 3.3 | 0.013 | 1.76 | 6.0 | 0.09 | 12.69 | 0.02 | 1.569 | 0.17 | 0.47 | 5.4 | 94.3 | 0.3 | -0.82 | 0.71 | 0.78 | 3.99 | 3.3 | 0.003 | 0.59 | 0.0 | 0.04 | 14.45 | 0.00 | 2.219 | 4.45 | 0.16 | 3.1 | 96.9 | 0.0 | 0.60 | 0.62 | 0.76 | 0.84 | 3.18 | 23564 | 2980 | 6 | 0 | 34 | 0 | 0 | logfile |
✔ | 7K45 | 22660 | 2022-04-04 | 2020-09-14 | 3.7 | 3.90 | 3.76 | 3.9 | 0.014 | 1.41 | 0.0 | 0.08 | 9.47 | 0.01 | 2.568 | 0.18 | 0.00 | 2.2 | 97.8 | 0.0 | 0.92 | 0.79 | 0.78 | 4.02 | 3.9 | 0.020 | 1.45 | 1.0 | 0.06 | 14.84 | 0.01 | 2.277 | 8.49 | 0.00 | 3.2 | 96.8 | 0.0 | 0.06 | 1.30 | 0.80 | 0.80 | 2.81 | 3038 | 419 | 4 | 0 | 2 | 0 | 0 | logfile |
✘ | 6P6F | 20261 | 2022-04-10 | 2019-06-03 | 4.5 | 4.71 | 4.50 | 4.6 | 0.017 | 1.59 | 0.0 | 0.09 | 9.24 | 0.01 | 2.442 | 0.18 | 0.00 | 0.3 | 99.7 | 0.0 | 0.73 | 0.71 | 0.82 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 159840 | 21060 | 120 | 0 | 0 | 0 | 0 | logfile |
✔ | 6X79 | 22083 | 2022-04-06 | 2020-05-29 | 2.9 | 3.14 | 3.00 | 3.1 | 0.013 | 1.33 | 0.0 | 0.09 | 10.39 | 0.01 | 2.382 | 0.18 | 0.26 | 2.5 | 97.5 | 0.0 | 0.59 | 0.71 | 0.74 | 3.18 | 3.1 | 0.004 | 0.60 | 0.0 | 0.04 | 14.67 | 0.00 | 2.196 | 5.63 | 2.70 | 2.5 | 97.5 | 0.0 | 0.38 | 1.35 | 0.72 | 0.80 | 2.62 | 22251 | 2850 | 15 | 0 | 51 | 0 | 0 | logfile |
✔ | 7NCJ | 12268 | 2022-04-05 | 2021-01-28 | 4.23 | 3.11 | 3.97 | 4.5 | 0.011 | 1.60 | 2.0 | 0.10 | 13.68 | 0.01 | 2.444 | 0.18 | 0.76 | 7.7 | 92.0 | 0.3 | -2.36 | 0.65 | 0.46 | — | 4.5 | 0.003 | 0.61 | 1.0 | 0.05 | 14.19 | 0.00 | 1.945 | 15.31 | 0.00 | 10.3 | 89.7 | 0.0 | -2.78 | 1.36 | 0.70 | 0.58 | — | 10860 | 774 | 12 | 0 | 0 | 0 | 5586 | logfile |
✔ | 7TP2 | 26046 | 2022-04-07 | 2022-01-24 | 3.72 | 4.22 | — | 3.7 | 0.013 | 1.75 | 6.0 | 0.10 | 13.56 | 0.01 | 2.529 | 0.18 | 1.32 | 7.2 | 92.4 | 0.4 | -1.34 | 0.85 | 0.84 | 2.45 | 3.7 | 0.003 | 0.60 | 0.0 | 0.04 | 13.99 | 0.00 | 2.148 | 6.99 | 0.11 | 4.4 | 95.5 | 0.1 | 0.06 | 0.47 | 0.85 | 0.85 | 1.67 | 24663 | 3047 | 20 | 0 | 61 | 0 | 0 | logfile |