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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7TJZ | 25947 | 2022-12-14 | 2022-01-17 | 4.4 | 7.00 | 4.54 | 4.2 | 0.019 | 2.21 | 0.0 | 0.00 | 6.67 | 0.01 | 2.384 | 0.19 | 0.00 | 4.2 | 94.2 | 1.6 | -0.41 | 0.58 | 0.63 | — | 4.3 | 0.012 | 0.93 | 0.0 | 0.00 | 5.55 | 0.00 | 2.081 | 10.56 | 0.00 | 10.4 | 89.3 | 0.3 | 0.17 | 0.73 | 0.79 | 0.83 | — | 20228 | 5056 | 27 | 0 | 0 | 0 | 0 | logfile |
✔ | 7LWL | 23549 | 2022-12-15 | 2021-03-01 | 2.84 | 3.04 | — | 3.0 | 0.013 | 1.79 | 2.0 | 0.09 | 12.97 | 0.01 | 2.505 | 0.19 | 0.53 | 4.2 | 95.6 | 0.2 | -0.78 | 0.72 | 0.83 | 4.07 | 3.0 | 0.004 | 0.62 | 0.0 | 0.05 | 15.17 | 0.00 | 2.131 | 5.71 | 1.56 | 2.9 | 97.1 | 0.0 | 0.34 | 0.63 | 0.73 | 0.85 | 3.36 | 23847 | 3003 | 6 | 0 | 30 | 0 | 0 | logfile |
✔ | 6oLK | 20115 | 2022-12-14 | 2019-04-16 | 4.0 | 4.14 | — | 4.1 | 0.005 | 1.04 | 0.0 | 0.06 | 5.09 | 0.01 | 2.445 | 0.20 | 0.00 | 2.3 | 97.7 | 0.0 | -0.75 | 0.56 | 0.49 | — | 4.1 | 0.003 | 0.69 | 0.0 | 0.04 | 4.93 | 0.00 | 2.195 | 4.38 | 0.00 | 8.3 | 91.7 | 0.0 | -1.09 | 1.39 | 0.63 | 0.59 | — | 10323 | 2094 | 6 | 0 | 0 | 0 | 0 | logfile |
✘ | 7SK6 | 25174 | 2022-12-18 | 2021-10-19 | 4.0 | 4.42 | — | 4.1 | 0.018 | 1.92 | 2.0 | 0.11 | 13.16 | 0.01 | 2.462 | 0.21 | 0.76 | 4.2 | 94.0 | 1.8 | 0.35 | 0.52 | 0.52 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 9144 | 585 | 4 | 0 | 0 | 0 | 4462 | logfile |
✔ | 7KE9 | 22835 | 2022-12-14 | 2020-10-10 | 3.08 | 3.62 | — | 3.5 | 0.013 | 1.73 | 0.0 | 0.09 | 12.05 | 0.01 | 2.491 | 0.21 | 0.04 | 5.8 | 94.0 | 0.2 | -0.81 | 0.80 | 0.80 | 4.06 | 3.5 | 0.002 | 0.59 | 0.0 | 0.04 | 13.68 | 0.00 | 2.161 | 5.91 | 0.13 | 3.1 | 96.9 | 0.0 | 0.38 | 1.22 | 0.79 | 0.83 | 3.15 | 22365 | 2875 | 18 | 0 | 59 | 0 | 0 | logfile |
✔ | 7LWK | 23548 | 2022-12-15 | 2021-03-01 | 2.92 | 3.11 | — | 3.1 | 0.013 | 1.77 | 3.0 | 0.09 | 12.92 | 0.01 | 2.508 | 0.21 | 0.65 | 4.3 | 95.6 | 0.1 | -0.78 | 0.71 | 0.82 | 3.51 | 3.1 | 0.006 | 0.68 | 0.0 | 0.05 | 15.35 | 0.00 | 2.055 | 5.73 | 1.91 | 3.5 | 96.5 | 0.0 | 0.41 | 1.24 | 0.73 | 0.85 | 2.96 | 23847 | 3003 | 6 | 0 | 30 | 0 | 0 | logfile |
✔ | 7ToY | 26041 | 2022-12-15 | 2022-01-24 | 3.53 | 3.95 | — | 3.5 | 0.013 | 1.76 | 4.0 | 0.10 | 13.48 | 0.01 | 2.517 | 0.21 | 1.50 | 6.8 | 92.8 | 0.4 | -1.10 | 0.85 | 0.84 | 2.97 | 3.5 | 0.003 | 0.59 | 0.0 | 0.04 | 14.09 | 0.00 | 2.123 | 6.36 | 0.15 | 4.1 | 95.8 | 0.1 | 0.38 | 0.49 | 0.85 | 0.85 | 2.11 | 24673 | 3049 | 20 | 0 | 61 | 0 | 0 | logfile |
✔ | 7LWi | 23546 | 2022-12-15 | 2021-03-01 | 3.07 | 3.28 | — | 3.2 | 0.013 | 1.77 | 1.0 | 0.09 | 13.26 | 0.01 | 2.478 | 0.21 | 1.07 | 5.3 | 94.4 | 0.2 | -1.20 | 0.73 | 0.79 | 3.51 | 3.2 | 0.005 | 0.67 | 0.0 | 0.05 | 14.94 | 0.00 | 2.103 | 7.47 | 0.31 | 4.4 | 95.5 | 0.0 | -0.02 | 0.68 | 0.73 | 0.81 | 2.68 | 23847 | 3003 | 6 | 0 | 30 | 0 | 0 | logfile |
✔ | 7LYK | 23593 | 2022-12-15 | 2021-03-07 | 3.65 | 3.91 | — | 3.8 | 0.013 | 1.73 | 4.0 | 0.09 | 12.85 | 0.01 | 2.493 | 0.22 | 0.35 | 6.0 | 93.7 | 0.3 | -0.98 | 0.81 | 0.82 | 2.68 | 3.8 | 0.003 | 0.59 | 0.0 | 0.04 | 14.13 | 0.00 | 2.177 | 5.50 | 0.12 | 3.5 | 96.5 | 0.0 | 0.47 | 0.58 | 0.81 | 0.83 | 2.01 | 23444 | 2983 | 6 | 0 | 25 | 0 | 0 | logfile |
✔ | 6UQK | 20849 | 2022-12-22 | 2019-10-20 | 3.77 | 4.46 | 4.11 | 4.3 | 0.003 | 0.53 | 0.0 | 0.04 | 9.91 | 0.00 | 2.196 | 0.22 | 0.00 | 5.0 | 95.0 | 0.0 | -1.84 | 0.74 | 0.78 | 1.71 | 4.3 | 0.003 | 0.60 | 0.0 | 0.04 | 12.63 | 0.00 | 2.251 | 4.46 | 0.41 | 7.5 | 92.5 | 0.0 | 1.15 | 0.61 | 0.75 | 0.81 | 1.93 | 51567 | 8032 | 8 | 0 | 188 | 0 | 0 | logfile |
✔ | 6G8Z | 4362 | 2022-12-13 | 2018-04-10 | 3.66 | 3.88 | 3.72 | 3.8 | 0.005 | 0.77 | 0.0 | 0.04 | 8.70 | 0.00 | 2.362 | 0.22 | 0.00 | 3.8 | 96.2 | 0.0 | -0.63 | 0.66 | 0.79 | 4.14 | 3.8 | 0.002 | 0.53 | 0.0 | 0.04 | 13.44 | 0.00 | 2.214 | 4.83 | 0.45 | 2.8 | 97.2 | 0.0 | 2.54 | 1.65 | 0.70 | 0.85 | 2.73 | 15966 | 1908 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 7LWM | 23550 | 2022-12-15 | 2021-03-01 | 2.83 | 3.01 | — | 3.0 | 0.013 | 1.77 | 4.0 | 0.09 | 12.85 | 0.01 | 2.518 | 0.22 | 0.59 | 5.3 | 94.4 | 0.4 | -0.71 | 0.72 | 0.84 | 4.08 | 3.0 | 0.004 | 0.62 | 0.0 | 0.04 | 15.06 | 0.00 | 2.201 | 4.91 | 1.69 | 3.5 | 96.5 | 0.1 | 0.45 | 0.63 | 0.72 | 0.85 | 3.44 | 23571 | 2980 | 9 | 0 | 37 | 0 | 0 | logfile |
✔ | 7KE8 | 22834 | 2022-12-15 | 2020-10-10 | 3.26 | 3.87 | — | 3.7 | 0.013 | 1.72 | 1.0 | 0.10 | 13.27 | 0.01 | 2.519 | 0.23 | 1.20 | 6.3 | 93.6 | 0.1 | -0.97 | 0.81 | 0.81 | 3.16 | 3.7 | 0.005 | 0.65 | 0.0 | 0.04 | 14.28 | 0.00 | 2.116 | 7.64 | 0.19 | 4.2 | 95.8 | 0.0 | -0.11 | 0.63 | 0.82 | 0.83 | 2.44 | 23994 | 2957 | 21 | 0 | 63 | 0 | 0 | logfile |
✔ | 7TPH | 26055 | 2022-12-14 | 2022-01-25 | 3.58 | 4.03 | — | 3.6 | 0.013 | 1.75 | 5.0 | 0.09 | 12.22 | 0.01 | 2.501 | 0.23 | 1.01 | 7.2 | 92.3 | 0.6 | -1.01 | 0.84 | 0.85 | 3.36 | 3.6 | 0.004 | 0.58 | 0.0 | 0.04 | 12.78 | 0.00 | 2.203 | 4.90 | 0.00 | 5.1 | 94.8 | 0.1 | 0.30 | 1.93 | 0.84 | 0.86 | 2.46 | 22180 | 2912 | 14 | 0 | 52 | 0 | 0 | logfile |
✔ | 7TLB | 25986 | 2022-12-14 | 2022-01-18 | 3.06 | 3.26 | — | 3.2 | 0.012 | 1.74 | 1.0 | 0.09 | 13.14 | 0.01 | 2.531 | 0.24 | 0.82 | 5.3 | 94.7 | 0.1 | -1.00 | 0.54 | 0.56 | 2.31 | 3.2 | 0.005 | 0.65 | 0.0 | 0.05 | 15.07 | 0.00 | 2.092 | 7.78 | 0.16 | 3.7 | 96.3 | 0.0 | 0.00 | 1.52 | 0.76 | 0.86 | 2.78 | 22806 | 2916 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 7TLD | 25988 | 2022-12-14 | 2022-01-18 | 2.89 | 3.35 | — | 3.3 | 0.013 | 1.80 | 0.0 | 0.09 | 13.31 | 0.01 | 2.524 | 0.24 | 0.94 | 5.2 | 94.6 | 0.2 | -1.25 | 0.33 | 0.48 | 3.75 | 3.3 | 0.004 | 0.61 | 0.0 | 0.04 | 15.36 | 0.00 | 2.157 | 6.38 | 1.68 | 3.5 | 96.5 | 0.0 | 0.09 | 0.61 | 0.62 | 0.79 | 3.01 | 22812 | 2916 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 7LWQ | 23554 | 2022-12-14 | 2021-03-01 | 3.44 | 3.73 | — | 3.6 | 0.013 | 1.77 | 3.0 | 0.10 | 13.71 | 0.01 | 2.519 | 0.24 | 1.18 | 6.6 | 93.1 | 0.4 | -1.34 | 0.77 | 0.79 | 2.74 | 3.6 | 0.003 | 0.60 | 1.0 | 0.04 | 14.92 | 0.00 | 2.152 | 7.27 | 0.38 | 4.0 | 96.0 | 0.0 | 0.24 | 1.26 | 0.78 | 0.81 | 2.06 | 19273 | 2425 | 7 | 0 | 29 | 0 | 0 | logfile |
✔ | 7TLC | 25987 | 2022-12-14 | 2022-01-18 | 2.83 | 3.28 | — | 3.2 | 0.013 | 1.82 | 3.0 | 0.10 | 13.37 | 0.02 | 2.518 | 0.24 | 1.54 | 5.3 | 94.5 | 0.2 | -1.18 | 0.34 | 0.47 | 4.12 | 3.2 | 0.004 | 0.64 | 0.0 | 0.05 | 15.55 | 0.00 | 2.120 | 6.14 | 2.20 | 3.9 | 96.1 | 0.0 | 0.00 | 0.60 | 0.51 | 0.71 | 3.51 | 23058 | 2948 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 7LWN | 23551 | 2022-12-15 | 2021-03-01 | 2.94 | 3.14 | — | 3.1 | 0.013 | 1.76 | 4.0 | 0.09 | 12.63 | 0.01 | 2.516 | 0.24 | 0.87 | 4.6 | 95.1 | 0.3 | -0.76 | 0.74 | 0.83 | 3.80 | 3.1 | 0.003 | 0.59 | 0.0 | 0.04 | 15.01 | 0.00 | 2.197 | 5.38 | 1.97 | 2.7 | 97.3 | 0.0 | 0.39 | 0.61 | 0.75 | 0.82 | 3.08 | 23570 | 2980 | 11 | 0 | 37 | 0 | 0 | logfile |
✔ | 7RLU | 24547 | 2022-12-14 | 2021-07-26 | 2.9 | 2.95 | 2.85 | 3.0 | 0.010 | 1.28 | 0.0 | 0.07 | 13.03 | 0.01 | 2.582 | 0.25 | 0.31 | 5.3 | 94.0 | 0.7 | -3.29 | 0.73 | 0.82 | 4.31 | 3.0 | 0.004 | 0.61 | 0.0 | 0.04 | 16.96 | 0.00 | 2.294 | 3.53 | 1.09 | 4.0 | 96.0 | 0.0 | 0.08 | 1.64 | 0.75 | 0.88 | 3.07 | 18188 | 2332 | 12 | 0 | 8 | 28 | 0 | logfile |