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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7TPH | 26055 | 2023-08-17 | 2022-01-25 | 3.58 | 4.03 | — | 3.6 | 0.013 | 1.76 | 5.0 | 0.10 | 12.39 | 0.01 | 2.501 | 0.16 | 1.01 | 7.2 | 92.3 | 0.6 | -1.01 | 0.84 | 0.85 | 3.36 | 3.6 | 0.003 | 0.58 | 0.0 | 0.04 | 12.96 | 0.00 | 2.211 | 4.62 | 0.14 | 4.7 | 95.2 | 0.1 | 0.29 | 1.93 | 0.84 | 0.86 | 2.45 | 22180 | 2912 | 14 | 0 | 52 | 0 | 0 | logfile |
✔ | 7N5G | 24189 | 2023-08-09 | 2021-06-05 | 2.4 | 2.16 | 2.42 | 1.5 | 0.022 | 1.51 | 0.0 | 0.09 | 10.57 | 0.01 | 2.386 | 0.17 | 0.00 | 0.8 | 99.2 | 0.0 | 1.84 | 0.40 | 0.79 | 3.64 | 1.5 | 0.003 | 0.57 | 0.0 | 0.04 | 16.52 | 0.00 | 2.220 | 4.78 | 2.61 | 1.4 | 98.6 | 0.0 | 2.92 | 1.20 | 0.39 | 0.80 | 2.57 | 2926 | 371 | 1 | 0 | 1 | 0 | 0 | logfile |
✔ | 7LYL | 23594 | 2023-08-17 | 2021-03-07 | 3.72 | 4.02 | — | 3.8 | 0.013 | 1.70 | 2.0 | 0.09 | 13.11 | 0.01 | 2.538 | 0.17 | 0.69 | 5.7 | 94.2 | 0.1 | -1.00 | 0.81 | 0.83 | 2.52 | 3.8 | 0.003 | 0.62 | 0.0 | 0.04 | 14.22 | 0.00 | 2.100 | 6.45 | 0.19 | 3.7 | 96.3 | 0.0 | 0.52 | 0.62 | 0.82 | 0.84 | 1.98 | 23826 | 3003 | 6 | 0 | 28 | 0 | 0 | logfile |
✔ | 7NCJ | 12268 | 2023-08-12 | 2021-01-28 | 4.23 | 3.11 | 3.97 | 4.5 | 0.011 | 1.60 | 2.0 | 0.10 | 13.68 | 0.01 | 2.444 | 0.18 | 0.76 | 7.7 | 92.0 | 0.3 | -2.36 | 0.65 | 0.46 | — | 4.5 | 0.003 | 0.60 | 1.0 | 0.05 | 13.98 | 0.00 | 1.897 | 13.84 | 0.00 | 11.2 | 88.8 | 0.0 | -2.88 | 1.39 | 0.69 | 0.58 | — | 10860 | 774 | 12 | 0 | 0 | 0 | 5586 | logfile |
✔ | 7ToU | 26038 | 2023-08-18 | 2022-01-24 | 3.24 | 3.49 | — | 3.3 | 0.014 | 1.82 | 8.0 | 0.11 | 13.56 | 0.01 | 2.517 | 0.18 | 1.20 | 6.2 | 93.2 | 0.7 | -1.00 | 0.84 | 0.85 | 3.52 | 3.3 | 0.003 | 0.60 | 0.0 | 0.04 | 14.04 | 0.00 | 2.134 | 5.38 | 0.04 | 4.2 | 95.7 | 0.0 | 0.51 | 0.57 | 0.85 | 0.87 | 2.72 | 24687 | 3050 | 20 | 0 | 61 | 0 | 0 | logfile |
✔ | 6UJA | 20794 | 2023-08-10 | 2019-10-02 | 3.3 | 3.49 | — | 3.4 | 0.014 | 1.49 | 0.0 | 0.09 | 10.46 | 0.01 | 1.802 | 0.19 | 0.14 | 2.7 | 97.1 | 0.2 | 0.28 | 0.82 | 0.82 | 3.35 | 3.4 | 0.004 | 0.65 | 0.0 | 0.05 | 13.99 | 0.00 | 2.008 | 6.45 | 0.55 | 3.4 | 96.6 | 0.0 | 0.13 | 1.49 | 0.83 | 0.85 | 3.06 | 8224 | 1128 | 10 | 0 | 23 | 0 | 0 | logfile |
✔ | 7TJZ | 25947 | 2023-08-16 | 2022-01-17 | 4.4 | 7.00 | 4.54 | 4.2 | 0.019 | 2.21 | 0.0 | 0.00 | 6.67 | 0.01 | 2.384 | 0.19 | 0.00 | 4.2 | 94.2 | 1.6 | -0.41 | 0.58 | 0.63 | — | 4.2 | 0.017 | 1.19 | 0.0 | 0.00 | 6.51 | 0.01 | 2.047 | 16.64 | 0.00 | 13.2 | 86.4 | 0.3 | -1.19 | 0.80 | 0.82 | 0.83 | — | 20228 | 5056 | 27 | 0 | 0 | 0 | 0 | logfile |
✔ | 8CSA | 26961 | 2023-08-17 | 2022-05-12 | 3.84 | 4.24 | 3.87 | 3.9 | 0.012 | 1.75 | 3.0 | 0.09 | 13.74 | 0.02 | 2.527 | 0.19 | 1.18 | 6.0 | 93.8 | 0.2 | -1.46 | 0.82 | 0.78 | 0.63 | 3.9 | 0.004 | 0.67 | 0.0 | 0.04 | 15.01 | 0.00 | 2.101 | 12.64 | 0.23 | 4.2 | 95.8 | 0.0 | 0.02 | 1.66 | 0.83 | 0.79 | 0.26 | 23442 | 3003 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 8G6K | 29772 | 2023-08-11 | 2023-02-15 | 3.6 | 3.71 | 3.52 | 3.4 | 0.002 | 0.48 | 0.0 | 0.04 | 4.19 | 0.00 | 2.523 | 0.20 | 0.00 | 2.7 | 97.3 | 0.0 | 1.65 | 0.54 | 0.71 | — | 3.5 | 0.003 | 0.60 | 0.0 | 0.04 | 4.50 | 0.00 | 2.284 | 2.64 | 0.00 | 6.7 | 93.3 | 0.0 | 0.05 | 1.47 | 0.54 | 0.74 | — | 9388 | 1379 | 7 | 0 | 0 | 0 | 2576 | logfile |
✔ | 6oLK | 20115 | 2023-08-16 | 2019-04-16 | 4.0 | 4.14 | — | 4.1 | 0.005 | 1.04 | 0.0 | 0.06 | 5.09 | 0.01 | 2.445 | 0.20 | 0.00 | 2.3 | 97.7 | 0.0 | -0.75 | 0.56 | 0.49 | — | 4.1 | 0.005 | 0.93 | 0.0 | 0.05 | 7.00 | 0.00 | 2.045 | 9.16 | 0.00 | 14.0 | 86.0 | 0.0 | -2.47 | 1.44 | 0.64 | 0.61 | — | 10323 | 2094 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 6X2C | 22001 | 2023-08-17 | 2020-05-20 | 3.2 | 3.70 | 3.21 | 3.6 | 0.013 | 1.81 | 6.0 | 0.09 | 13.39 | 0.02 | 2.550 | 0.20 | 3.17 | 5.3 | 94.4 | 0.3 | -1.74 | 0.79 | 0.81 | 3.48 | 3.6 | 0.003 | 0.59 | 0.0 | 0.04 | 13.81 | 0.00 | 2.226 | 5.41 | 0.08 | 3.7 | 96.3 | 0.0 | 0.19 | 1.24 | 0.80 | 0.85 | 3.02 | 22800 | 2913 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 7TP1 | 26045 | 2023-08-18 | 2022-01-24 | 3.81 | 4.30 | — | 3.8 | 0.014 | 1.75 | 5.0 | 0.10 | 13.73 | 0.01 | 2.523 | 0.21 | 1.39 | 6.7 | 92.4 | 0.9 | -1.32 | 0.85 | 0.84 | 1.81 | 3.8 | 0.005 | 0.72 | 0.0 | 0.04 | 14.38 | 0.00 | 2.062 | 9.68 | 0.15 | 6.3 | 93.7 | 0.0 | -0.23 | 1.20 | 0.86 | 0.85 | 1.65 | 24646 | 3046 | 20 | 0 | 61 | 0 | 0 | logfile |
✔ | 7TP2 | 26046 | 2023-08-18 | 2022-01-24 | 3.72 | 4.22 | — | 3.7 | 0.014 | 1.76 | 6.0 | 0.10 | 13.76 | 0.01 | 2.529 | 0.21 | 1.32 | 7.2 | 92.4 | 0.4 | -1.34 | 0.85 | 0.84 | 2.45 | 3.7 | 0.006 | 0.69 | 0.0 | 0.04 | 14.15 | 0.00 | 2.107 | 8.05 | 0.15 | 5.6 | 94.3 | 0.1 | -0.27 | 0.47 | 0.85 | 0.85 | 1.77 | 24663 | 3047 | 20 | 0 | 61 | 0 | 0 | logfile |
✔ | 7QKJ | 14044 | 2023-08-10 | 2021-12-17 | 3.26 | 3.08 | 3.11 | 3.2 | 0.012 | 2.04 | 12.0 | 0.16 | 11.59 | 0.01 | 2.510 | 0.21 | 0.00 | 9.9 | 90.1 | 0.0 | -2.24 | 0.35 | 0.71 | 3.92 | 3.2 | 0.005 | 0.79 | 0.0 | 0.05 | 15.54 | 0.00 | 2.135 | 10.82 | 0.25 | 7.9 | 92.1 | 0.0 | -2.54 | 1.07 | 0.36 | 0.85 | 3.02 | 6888 | 900 | 12 | 0 | 0 | 0 | 0 | logfile |
✔ | 6G8Z | 4362 | 2023-08-14 | 2018-04-10 | 3.66 | 3.88 | 3.72 | 3.8 | 0.005 | 0.77 | 0.0 | 0.04 | 8.70 | 0.00 | 2.362 | 0.22 | 0.00 | 3.8 | 96.2 | 0.0 | -0.63 | 0.66 | 0.79 | 4.14 | 3.8 | 0.004 | 0.60 | 0.0 | 0.04 | 13.40 | 0.00 | 2.213 | 5.17 | 0.06 | 3.9 | 96.1 | 0.0 | 2.38 | 1.65 | 0.70 | 0.85 | 2.82 | 15966 | 1908 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 6UQK | 20849 | 2023-08-27 | 2019-10-20 | 3.77 | 4.46 | 4.11 | 4.3 | 0.003 | 0.53 | 0.0 | 0.04 | 9.91 | 0.00 | 2.196 | 0.22 | 0.00 | 5.0 | 95.0 | 0.0 | -1.84 | 0.74 | 0.78 | 1.71 | 4.3 | 0.002 | 0.59 | 0.0 | 0.04 | 12.68 | 0.00 | 2.246 | 3.91 | 0.26 | 6.1 | 93.9 | 0.0 | 1.04 | 0.62 | 0.75 | 0.80 | 1.88 | 51567 | 8032 | 8 | 0 | 188 | 0 | 0 | logfile |
✔ | 7SG4 | 25105 | 2023-08-20 | 2021-10-04 | 3.43 | 4.18 | — | 3.5 | 0.014 | 1.91 | 30.0 | 0.12 | 13.29 | 0.02 | 2.531 | 0.22 | 2.01 | 9.5 | 88.9 | 1.6 | -2.14 | 0.84 | 0.82 | 2.83 | 3.5 | 0.003 | 0.71 | 0.0 | 0.05 | 13.79 | 0.00 | 2.025 | 9.90 | 0.10 | 8.3 | 91.5 | 0.2 | -0.77 | 1.24 | 0.85 | 0.82 | 1.84 | 28709 | 3737 | 8 | 0 | 47 | 0 | 0 | logfile |
✔ | 7L6o | 23124 | 2023-08-21 | 2020-12-23 | 3.9 | 4.18 | 3.92 | 3.9 | 0.016 | 2.00 | 2.0 | 0.12 | 14.17 | 0.02 | 2.534 | 0.23 | 0.70 | 8.2 | 91.1 | 0.7 | -1.91 | 0.83 | 0.80 | 3.20 | 3.9 | 0.003 | 0.62 | 0.0 | 0.04 | 14.43 | 0.00 | 1.939 | 5.88 | 0.19 | 5.1 | 94.9 | 0.0 | -0.75 | 1.22 | 0.83 | 0.80 | 2.18 | 29270 | 1776 | 51 | 0 | 132 | 0 | 13598 | logfile |
✔ | 6U7H | 20668 | 2023-08-17 | 2019-09-02 | 3.1 | 3.91 | 3.18 | 3.6 | 0.013 | 1.78 | 33.0 | 0.11 | 13.27 | 0.01 | 2.282 | 0.24 | 0.24 | 4.3 | 95.7 | 0.0 | -0.94 | 0.86 | 0.85 | 3.84 | 3.6 | 0.003 | 0.59 | 0.0 | 0.04 | 13.74 | 0.00 | 2.291 | 6.30 | 0.16 | 3.2 | 96.8 | 0.0 | 0.49 | 1.23 | 0.85 | 0.84 | 3.09 | 23394 | 2895 | 21 | 0 | 81 | 0 | 0 | logfile |
✔ | 7KQE | 22997 | 2023-08-15 | 2020-11-15 | 2.88 | 3.80 | 2.90 | 3.4 | 0.012 | 1.80 | 8.0 | 0.10 | 13.99 | 0.01 | 2.478 | 0.25 | 1.08 | 6.3 | 93.6 | 0.1 | -1.09 | 0.73 | 0.37 | 2.42 | 2.9 | 0.003 | 0.59 | 0.0 | 0.04 | 14.25 | 0.00 | 2.025 | 4.55 | 0.77 | 4.4 | 95.6 | 0.0 | -0.11 | 0.67 | 0.87 | 0.83 | 2.31 | 68370 | 4467 | 9 | 0 | 0 | 0 | 33744 | logfile |