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Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 8CR9 | 16805 | 2023-12-08 | 2023-03-08 | 4.2 | 3.61 | 4.06 | 4.0 | 0.013 | 1.97 | 3.0 | 0.10 | 14.42 | 0.02 | 2.568 | 0.46 | 2.87 | 9.6 | 89.0 | 1.4 | -2.67 | 0.57 | 0.61 | — | 4.0 | 0.004 | 0.75 | 0.0 | 0.04 | 13.89 | 0.01 | 1.967 | 11.25 | 0.00 | 14.5 | 85.1 | 0.4 | -2.98 | 1.04 | 0.57 | 0.59 | — | 8621 | 571 | 3 | 0 | 0 | 0 | 4272 | logfile |
✔ | 8Q8S | 18259 | 2023-12-09 | 2023-08-18 | 2.68 | 2.07 | 2.67 | 2.3 | 0.011 | 2.11 | 3.0 | 0.10 | 9.52 | 0.01 | 2.513 | 0.47 | 0.00 | 7.2 | 92.8 | 0.0 | -1.68 | 0.30 | 0.74 | 5.06 | 2.2 | 0.003 | 0.68 | 0.0 | 0.05 | 16.62 | 0.01 | 2.117 | 5.28 | 1.68 | 5.4 | 94.6 | 0.0 | -2.51 | 1.89 | 0.31 | 0.79 | 5.07 | 10611 | 684 | 9 | 0 | 0 | 0 | 5409 | logfile |
✔ | 7MN5 | 23916 | 2023-12-09 | 2021-04-30 | 2.93 | 3.53 | 3.04 | 3.3 | 0.013 | 1.46 | 0.0 | 0.08 | 10.99 | 0.01 | 2.311 | 0.48 | 0.00 | 3.3 | 96.7 | 0.0 | -0.05 | 0.82 | 0.81 | 3.67 | 3.3 | 0.003 | 0.63 | 0.0 | 0.04 | 13.38 | 0.00 | 2.229 | 4.68 | 1.71 | 4.3 | 95.7 | 0.0 | -0.35 | 1.39 | 0.81 | 0.84 | 3.46 | 9526 | 1213 | 8 | 0 | 13 | 0 | 0 | logfile |
✔ | 8B8T | 15921 | 2023-12-08 | 2022-10-05 | 4.2 | 3.64 | 4.09 | 4.1 | 0.011 | 1.78 | 2.0 | 0.09 | 14.33 | 0.01 | 2.558 | 0.50 | 1.78 | 3.9 | 95.8 | 0.3 | -1.08 | 0.73 | 0.77 | — | 4.0 | 0.008 | 0.97 | 0.0 | 0.05 | 13.59 | 0.01 | 2.070 | 11.18 | 0.00 | 5.9 | 94.1 | 0.0 | -0.32 | 0.52 | 0.74 | 0.78 | — | 7180 | 989 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 7ZJ5 | 14741 | 2023-12-09 | 2022-04-08 | 4.55 | 5.91 | 5.09 | 4.4 | 0.002 | 0.65 | 0.0 | 0.04 | 22.71 | 0.00 | 2.256 | 0.50 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.92 | 0.85 | — | 4.5 | 0.008 | 0.90 | 0.0 | 0.04 | 25.73 | 0.01 | 1.622 | 78.91 | 0.00 | 0.0 | 0.0 | 0.0 | — | 3.97 | 0.93 | 0.87 | — | 12014 | 0 | 1 | 374 | 1 | 0 | 4030 | logfile |
✔ | 7ADJ | 11727 | 2023-12-09 | 2020-09-15 | 2.8 | 3.02 | 2.79 | 3.0 | 0.014 | 1.99 | 4.0 | 0.11 | 14.68 | 0.01 | 2.562 | 0.51 | 0.18 | 6.9 | 93.1 | 0.0 | -2.18 | 0.34 | 0.70 | 3.50 | 3.0 | 0.003 | 0.62 | 0.0 | 0.04 | 17.08 | 0.00 | 2.149 | 6.18 | 2.57 | 7.0 | 93.0 | 0.0 | -1.13 | 2.79 | 0.38 | 0.75 | 2.92 | 9710 | 613 | 1 | 0 | 0 | 0 | 4790 | logfile |
✔ | 6U68 | 20662 | 2023-12-09 | 2019-08-29 | 4.5 | 4.54 | — | 4.5 | 0.006 | 0.90 | 0.0 | 0.06 | 4.27 | 0.00 | 2.419 | 0.52 | 0.00 | 2.6 | 97.3 | 0.1 | -3.82 | 0.71 | 0.71 | — | 4.5 | 0.003 | 0.71 | 0.0 | 0.05 | 4.13 | 0.00 | 2.325 | 3.21 | 0.00 | 6.1 | 93.9 | 0.0 | -0.04 | 1.78 | 0.77 | 0.81 | — | 10489 | 2133 | 8 | 0 | 0 | 0 | 0 | logfile |
✔ | 8oSK | 17157 | 2023-12-10 | 2023-04-19 | 3.6 | 4.91 | — | 3.0 | 0.009 | 1.12 | 0.0 | 0.06 | 24.39 | 0.01 | 2.263 | 0.52 | 0.00 | 0.3 | 99.7 | 0.0 | 1.80 | 0.86 | 0.79 | 0.46 | 3.0 | 0.004 | 0.75 | 0.0 | 0.04 | 26.55 | 0.00 | 2.182 | 9.34 | 0.47 | 2.2 | 97.8 | 0.0 | 1.57 | 1.24 | 0.87 | 0.82 | 0.33 | 13995 | 1343 | 12 | 248 | 0 | 0 | 0 | logfile |
✔ | 6VFi | 21173 | 2023-12-08 | 2020-01-05 | 4.54 | 4.63 | 4.96 | 4.5 | 0.018 | 1.47 | 0.0 | 0.09 | 10.93 | 0.01 | 2.449 | 0.53 | 0.00 | 1.3 | 98.7 | 0.0 | 1.21 | 0.80 | 0.78 | — | 4.5 | 0.003 | 0.69 | 0.0 | 0.04 | 13.66 | 0.00 | 1.654 | 28.86 | 0.00 | 2.9 | 97.1 | 0.0 | 1.43 | 2.11 | 0.80 | 0.80 | — | 58488 | 7560 | 48 | 0 | 0 | 0 | 0 | logfile |
✔ | 8R3T | 18874 | 2023-12-07 | 2023-11-10 | 3.1 | 3.18 | 2.95 | 3.4 | 0.011 | 2.12 | 6.0 | 0.11 | 14.98 | 0.01 | 2.582 | 0.55 | 5.45 | 2.0 | 96.2 | 1.8 | -1.86 | 0.37 | 0.73 | 5.38 | 3.4 | 0.003 | 0.65 | 0.0 | 0.05 | 13.54 | 0.00 | 2.169 | 4.79 | 0.00 | 5.6 | 94.2 | 0.3 | -2.63 | 1.74 | 0.40 | 0.76 | 4.71 | 5438 | 354 | 6 | 0 | 0 | 0 | 2804 | logfile |
✘ | 6BNP | 7116 | 2023-12-08 | 2017-11-17 | 4.6 | 4.61 | 3.78 | 4.4 | 0.015 | 2.10 | 24.0 | 0.11 | 16.18 | 0.02 | 1.814 | 0.55 | 1.80 | 8.3 | 90.3 | 1.3 | -3.94 | 0.48 | 0.46 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 56792 | 7160 | 22 | 0 | 16 | 0 | 0 | logfile |
✔ | 7LY0 | 23581 | 2023-12-07 | 2021-03-05 | 2.6 | 2.57 | 2.63 | 2.7 | 0.012 | 1.19 | 0.0 | 0.08 | 9.59 | 0.01 | 2.515 | 0.55 | 0.36 | 1.2 | 98.8 | 0.0 | 1.70 | 0.61 | 0.70 | 5.23 | 2.7 | 0.003 | 0.61 | 0.0 | 0.04 | 15.14 | 0.00 | 2.141 | 8.47 | 3.21 | 2.4 | 97.6 | 0.0 | 0.61 | 1.63 | 0.69 | 0.76 | 4.02 | 2805 | 354 | 5 | 0 | 6 | 0 | 0 | logfile |
✔ | 8PVH | 17966 | 2023-12-10 | 2023-07-17 | 2.9 | 2.53 | 2.93 | 3.0 | 0.010 | 1.69 | 0.0 | 0.08 | 15.36 | 0.01 | 2.437 | 0.56 | 1.49 | 2.0 | 97.8 | 0.2 | -1.08 | 0.53 | 0.78 | 4.67 | 2.9 | 0.003 | 0.59 | 0.0 | 0.04 | 18.25 | 0.00 | 2.275 | 8.16 | 2.61 | 2.6 | 97.4 | 0.0 | 1.18 | 1.09 | 0.68 | 0.84 | 4.09 | 15172 | 1972 | 8 | 0 | 4 | 0 | 0 | logfile |
✔ | 7LXX | 23578 | 2023-12-07 | 2021-03-05 | 3.0 | 2.96 | 3.03 | 3.2 | 0.012 | 1.19 | 0.0 | 0.06 | 10.06 | 0.01 | 2.519 | 0.57 | 0.00 | 3.6 | 96.4 | 0.0 | 0.69 | 0.75 | 0.78 | 4.22 | 3.1 | 0.005 | 0.70 | 0.0 | 0.05 | 14.28 | 0.00 | 2.114 | 9.26 | 3.16 | 4.8 | 95.2 | 0.0 | -0.52 | 1.60 | 0.76 | 0.82 | 4.49 | 2740 | 352 | 5 | 0 | 4 | 0 | 0 | logfile |
✔ | 7UAC | 26420 | 2023-12-07 | 2022-03-12 | 2.7 | 2.83 | 2.85 | 2.6 | 0.012 | 1.79 | 5.0 | 0.11 | 12.54 | 0.02 | 1.626 | 0.57 | 0.00 | 3.2 | 96.8 | 0.0 | -0.63 | 0.64 | 0.82 | 4.65 | 2.7 | 0.004 | 0.77 | 0.0 | 0.05 | 15.79 | 0.00 | 1.902 | 9.63 | 1.45 | 4.1 | 95.7 | 0.2 | -0.07 | 1.73 | 0.66 | 0.86 | 3.09 | 4540 | 546 | 6 | 0 | 13 | 0 | 0 | logfile |
✔ | 8F54 | 28860 | 2023-12-10 | 2022-11-11 | 2.5 | 2.67 | 2.56 | 2.7 | 0.003 | 0.45 | 0.0 | 0.03 | 11.59 | 0.00 | 2.491 | 0.57 | 0.00 | 0.0 | 100.0 | 0.0 | 3.06 | 0.68 | 0.76 | 3.44 | 2.7 | 0.004 | 0.58 | 0.0 | 0.04 | 18.01 | 0.01 | 2.225 | 4.57 | 0.76 | 1.3 | 98.7 | 0.0 | 3.13 | 1.40 | 0.68 | 0.81 | 3.67 | 66960 | 4020 | 60 | 0 | 0 | 0 | 33840 | logfile |
✔ | 6D3R | 7793 | 2023-12-08 | 2018-04-16 | 4.3 | 4.80 | 4.40 | 4.5 | 0.017 | 1.75 | 0.0 | 0.10 | 11.89 | 0.01 | 2.385 | 0.57 | 0.00 | 1.5 | 98.5 | 0.0 | 0.66 | 0.66 | 0.76 | — | 4.5 | 0.003 | 0.66 | 0.0 | 0.04 | 12.43 | 0.00 | 2.259 | 7.92 | 0.00 | 2.9 | 97.1 | 0.0 | 1.91 | 1.22 | 0.68 | 0.78 | — | 7610 | 1127 | 1 | 0 | 2 | 0 | 0 | logfile |
✔ | 8CRB | 16807 | 2023-12-08 | 2023-03-08 | 4.6 | 4.12 | 4.59 | 4.0 | 0.013 | 1.98 | 2.0 | 0.10 | 14.75 | 0.02 | 2.540 | 0.58 | 1.23 | 10.1 | 88.0 | 1.9 | -2.65 | 0.72 | 0.61 | — | 4.0 | 0.005 | 0.79 | 0.0 | 0.04 | 13.32 | 0.01 | 1.974 | 20.89 | 0.00 | 14.9 | 84.5 | 0.5 | -2.77 | 1.44 | 0.73 | 0.63 | — | 8665 | 582 | 3 | 0 | 0 | 0 | 4286 | logfile |
✔ | 7NCG | 12265 | 2023-12-09 | 2021-01-28 | 3.43 | 3.45 | 3.16 | 3.6 | 0.012 | 2.20 | 0.0 | 0.08 | 10.99 | 0.01 | 2.685 | 0.58 | 0.00 | 7.8 | 92.2 | 0.0 | -1.51 | 0.58 | 0.69 | 3.64 | 3.7 | 0.003 | 0.66 | 0.0 | 0.05 | 14.04 | 0.00 | 2.333 | 9.12 | 0.39 | 7.2 | 92.8 | 0.0 | -2.63 | 1.46 | 0.61 | 0.73 | 3.17 | 10428 | 732 | 12 | 0 | 0 | 0 | 5376 | logfile |
✘ | 7KEJ | 22839 | 2023-12-10 | 2020-10-11 | 3.8 | 3.55 | — | 3.6 | 0.021 | 1.73 | 0.0 | 0.11 | 9.85 | 0.01 | 1.201 | 0.59 | 0.00 | 0.4 | 99.6 | 0.0 | 1.20 | 0.82 | 0.84 | 4.49 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 13806 | 1740 | 18 | 0 | 24 | 0 | 0 | logfile |