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Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7XJX | 33236 | 2024-03-10 | 2022-04-18 | 2.7 | 2.78 | 1.76 | 2.9 | 0.008 | 0.81 | 0.0 | 0.06 | 12.77 | 0.00 | 2.438 | 12.63 | 0.00 | 16.4 | 83.6 | 0.0 | -5.02 | 0.48 | 0.81 | 4.92 | 2.9 | 0.004 | 0.77 | 0.0 | 0.05 | 14.58 | 0.00 | 2.392 | 9.10 | 4.44 | 12.3 | 87.7 | 0.0 | -3.52 | 1.16 | 0.45 | 0.81 | 4.78 | 2628 | 378 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 8Q98 | 18271 | 2024-03-11 | 2023-08-20 | 1.75 | 1.75 | 1.77 | 1.8 | 0.011 | 1.66 | 0.0 | 0.07 | 9.83 | 0.01 | 2.543 | 0.00 | 0.00 | 0.5 | 99.5 | 0.0 | -0.80 | 0.22 | 0.65 | 8.64 | 1.8 | 0.002 | 0.49 | 0.0 | 0.05 | 13.57 | 0.00 | 2.336 | 2.28 | 0.51 | 0.2 | 99.8 | 0.0 | -0.44 | 0.91 | 0.43 | 0.90 | 7.94 | 7032 | 450 | 6 | 0 | 0 | 0 | 3588 | logfile |
✔ | 6R4R | 4727 | 2024-03-10 | 2019-03-23 | 3.4 | 3.01 | 1.77 | 3.8 | 0.008 | 1.43 | 0.0 | 0.08 | 10.87 | 0.01 | 2.308 | 6.73 | 0.00 | 12.0 | 88.0 | 0.0 | -5.16 | 0.32 | 0.64 | 5.08 | 3.6 | 0.005 | 0.82 | 0.0 | 0.05 | 16.86 | 0.00 | 2.092 | 17.18 | 6.35 | 9.1 | 90.9 | 0.0 | -4.83 | 1.37 | 0.32 | 0.68 | 4.07 | 4312 | 539 | 7 | 0 | 0 | 0 | 0 | logfile |
✔ | 8A4L | 15148 | 2024-03-11 | 2022-06-12 | 2.68 | 2.73 | 1.77 | 2.8 | 0.004 | 0.65 | 0.0 | 0.05 | 13.43 | 0.00 | 2.385 | 10.11 | 0.00 | 0.0 | 100.0 | 0.0 | -3.33 | 0.52 | 0.85 | 5.71 | 2.8 | 0.007 | 0.68 | 0.0 | 0.06 | 17.32 | 0.00 | 2.250 | 10.61 | 4.23 | 3.0 | 97.0 | 0.0 | -3.68 | 1.56 | 0.53 | 0.87 | 5.60 | 7755 | 1125 | 15 | 0 | 0 | 0 | 0 | logfile |
✔ | 8CPX | 16789 | 2024-03-23 | 2023-03-03 | 1.76 | 1.61 | 1.78 | 1.6 | 0.005 | 0.80 | 0.0 | 0.06 | 14.97 | 0.01 | 2.063 | 5.37 | 0.00 | 1.0 | 99.0 | 0.0 | 2.18 | 0.75 | 0.81 | 8.02 | 1.6 | 0.003 | 0.65 | 0.0 | 0.04 | 15.93 | 0.00 | 2.149 | 4.02 | 1.31 | 1.2 | 98.8 | 0.0 | 3.96 | 0.38 | 0.79 | 0.85 | 7.66 | 35827 | 4152 | 72 | 0 | 38 | 1709 | 0 | logfile |
✔ | 8CPW | 16788 | 2024-03-23 | 2023-03-03 | 1.79 | 1.64 | 1.78 | 1.7 | 0.005 | 0.84 | 0.0 | 0.06 | 14.35 | 0.01 | 2.180 | 3.39 | 0.63 | 1.0 | 99.0 | 0.0 | 2.13 | 0.77 | 0.83 | 8.34 | 1.6 | 0.003 | 0.66 | 0.0 | 0.04 | 14.70 | 0.00 | 2.220 | 4.01 | 0.65 | 1.2 | 98.8 | 0.0 | 4.15 | 0.23 | 0.77 | 0.85 | 7.80 | 36004 | 4152 | 72 | 0 | 38 | 1886 | 0 | logfile |
✔ | 7ZG7 | 14705 | 2024-03-23 | 2022-04-02 | 1.77 | 1.79 | 1.79 | 1.8 | 0.004 | 0.74 | 0.0 | 0.04 | 14.44 | 0.01 | 1.952 | 3.06 | 0.00 | 1.8 | 98.2 | 0.0 | 3.49 | 0.77 | 0.86 | 9.05 | 1.8 | 0.004 | 0.69 | 0.0 | 0.04 | 15.33 | 0.00 | 1.997 | 3.32 | 0.37 | 2.4 | 97.6 | 0.0 | 4.81 | 0.71 | 0.79 | 0.88 | 9.05 | 39086 | 4128 | 72 | 0 | 382 | 2680 | 0 | logfile |
✔ | 8CPV | 16787 | 2024-03-23 | 2023-03-03 | 1.76 | 1.73 | 1.80 | 1.7 | 0.006 | 0.91 | 0.0 | 0.07 | 14.41 | 0.01 | 2.182 | 2.58 | 0.00 | 1.0 | 99.0 | 0.0 | 2.15 | 0.78 | 0.84 | 8.93 | 1.7 | 0.002 | 0.49 | 0.0 | 0.03 | 14.99 | 0.00 | 2.274 | 3.00 | 0.00 | 1.8 | 98.2 | 0.0 | 4.87 | 1.19 | 0.81 | 0.87 | 8.51 | 35855 | 4152 | 72 | 0 | 38 | 1737 | 0 | logfile |
✔ | 8CPU | 16786 | 2024-03-23 | 2023-03-03 | 1.76 | 1.54 | 1.80 | 1.6 | 0.004 | 0.71 | 0.0 | 0.05 | 14.91 | 0.01 | 1.976 | 4.95 | 0.00 | 1.0 | 99.0 | 0.0 | 2.29 | 0.71 | 0.77 | 8.55 | 1.6 | 0.003 | 0.53 | 0.0 | 0.04 | 15.47 | 0.00 | 2.115 | 4.47 | 0.30 | 1.8 | 98.2 | 0.0 | 4.56 | 0.31 | 0.73 | 0.80 | 8.29 | 35823 | 4152 | 72 | 0 | 38 | 1705 | 0 | logfile |
✔ | 8CPT | 16785 | 2024-03-23 | 2023-03-03 | 1.79 | 1.72 | 1.81 | 1.8 | 0.004 | 0.72 | 0.0 | 0.05 | 15.65 | 0.01 | 2.157 | 1.26 | 0.49 | 1.0 | 99.0 | 0.0 | 2.30 | 0.80 | 0.85 | 8.36 | 1.8 | 0.003 | 0.59 | 0.0 | 0.04 | 16.52 | 0.00 | 2.197 | 1.43 | 2.21 | 1.8 | 98.2 | 0.0 | 4.12 | 0.32 | 0.81 | 0.87 | 8.14 | 36024 | 4152 | 72 | 0 | 38 | 1906 | 0 | logfile |
✘ | 7EFD | 31084 | 2024-03-10 | 2021-03-21 | 1.77 | 1.78 | 1.82 | 1.9 | 0.033 | 3.16 | 12.0 | 0.09 | 15.32 | 0.02 | 0.001 | 1.61 | 2.15 | 1.7 | 97.5 | 0.8 | -0.54 | 0.74 | 0.82 | 5.75 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 4004 | 480 | 4 | 0 | 4 | 156 | 0 | logfile |
✔ | 8HF7 | 34715 | 2024-03-14 | 2022-11-09 | 3.8 | 4.66 | 1.82 | 4.2 | 0.006 | 1.34 | 2.0 | 0.07 | 14.02 | 0.01 | 2.294 | 7.91 | 0.61 | 5.9 | 93.5 | 0.6 | -3.03 | 0.63 | 0.74 | 0.62 | 4.3 | 0.003 | 0.76 | 0.0 | 0.04 | 16.19 | 0.00 | 2.136 | 16.10 | 2.53 | 6.1 | 93.5 | 0.4 | 0.33 | 0.60 | 0.64 | 0.77 | 0.49 | 8978 | 1126 | 4 | 0 | 26 | 0 | 0 | logfile |
✔ | 8CGU | 16651 | 2024-03-23 | 2023-02-06 | 1.89 | 1.60 | 1.82 | 1.8 | 0.009 | 1.58 | 1.0 | 0.11 | 22.07 | 0.02 | 1.895 | 0.38 | 0.38 | 2.4 | 97.6 | 0.0 | -0.61 | 0.60 | 0.81 | 6.95 | 1.8 | 0.005 | 0.83 | 0.0 | 0.04 | 22.34 | 0.01 | 1.797 | 4.17 | 0.87 | 2.0 | 98.0 | 0.0 | 0.76 | 2.28 | 0.70 | 0.88 | 6.49 | 35196 | 1266 | 31 | 1078 | 87 | 1871 | 0 | logfile |
✔ | 8CEU | 16613 | 2024-03-19 | 2023-02-02 | 1.83 | 1.74 | 1.82 | 1.7 | 0.009 | 1.56 | 16.0 | 0.11 | 22.49 | 0.02 | 1.830 | 0.53 | 0.65 | 2.7 | 97.2 | 0.0 | -1.11 | 0.79 | 0.85 | 6.99 | 1.7 | 0.006 | 0.92 | 16.0 | 0.05 | 22.81 | 0.01 | 1.795 | 4.08 | 0.77 | 2.0 | 98.0 | 0.0 | -0.32 | 0.19 | 0.84 | 0.89 | 6.88 | 92838 | 3076 | 79 | 2872 | 304 | 6830 | 0 | logfile |
✔ | 7QK5 | 14038 | 2024-03-15 | 2021-12-17 | 1.92 | 1.67 | 1.83 | 2.2 | 0.011 | 1.89 | 4.0 | 0.10 | 10.96 | 0.01 | 2.401 | 0.10 | 0.00 | 4.5 | 95.5 | 0.0 | -1.58 | 0.32 | 0.78 | 6.85 | 2.2 | 0.004 | 0.64 | 0.0 | 0.05 | 18.07 | 0.01 | 2.251 | 3.63 | 2.22 | 3.7 | 96.3 | 0.0 | -1.68 | 1.63 | 0.36 | 0.83 | 7.23 | 10485 | 666 | 18 | 0 | 36 | 0 | 5337 | logfile |
✔ | 8CPM | 16783 | 2024-03-23 | 2023-03-03 | 1.81 | 1.57 | 1.84 | 1.6 | 0.005 | 0.85 | 0.0 | 0.05 | 15.21 | 0.01 | 1.916 | 7.77 | 0.00 | 1.0 | 99.0 | 0.0 | 2.32 | 0.70 | 0.75 | 7.56 | 1.6 | 0.003 | 0.58 | 0.0 | 0.04 | 16.44 | 0.00 | 2.052 | 6.36 | 0.63 | 2.2 | 97.8 | 0.0 | 4.49 | 0.34 | 0.71 | 0.77 | 7.63 | 36090 | 4152 | 72 | 0 | 38 | 1972 | 0 | logfile |
✔ | 6Y1A | 10669 | 2024-03-10 | 2020-02-11 | 4.2 | 3.60 | 1.84 | 4.3 | 0.005 | 1.09 | 0.0 | 0.07 | 9.42 | 0.00 | 2.509 | 15.01 | 0.00 | 4.3 | 95.7 | 0.0 | -4.99 | 0.53 | 0.63 | — | 4.2 | 0.003 | 0.67 | 0.0 | 0.04 | 10.92 | 0.00 | 2.098 | 9.36 | 0.00 | 6.0 | 94.0 | 0.0 | -4.87 | 1.08 | 0.57 | 0.75 | — | 2960 | 400 | 32 | 0 | 16 | 0 | 0 | logfile |
✔ | 7oZH | 13124 | 2024-03-10 | 2021-06-28 | 3.02 | 3.20 | 1.84 | 3.3 | 0.024 | 1.40 | 0.0 | 0.09 | 7.44 | 0.01 | 2.546 | 14.72 | 0.00 | 5.4 | 94.6 | 0.0 | -2.78 | 0.33 | 0.60 | 4.68 | 3.3 | 0.006 | 0.75 | 0.0 | 0.05 | 14.93 | 0.00 | 2.349 | 18.36 | 7.95 | 10.5 | 89.5 | 0.0 | -2.51 | 2.50 | 0.39 | 0.69 | 1.00 | 3890 | 580 | 10 | 0 | 0 | 0 | 0 | logfile |
✔ | 7Xo1 | 33333 | 2024-03-10 | 2022-04-30 | 3.0 | 2.71 | 1.85 | 3.1 | 0.002 | 0.53 | 0.0 | 0.05 | 16.42 | 0.00 | 2.269 | 6.86 | 0.00 | 5.0 | 95.0 | 0.0 | -2.46 | 0.45 | 0.86 | 4.75 | 3.1 | 0.007 | 0.66 | 0.0 | 0.05 | 18.46 | 0.00 | 2.280 | 3.05 | 1.55 | 8.3 | 91.7 | 0.0 | -2.15 | 0.32 | 0.44 | 0.87 | 5.88 | 2550 | 372 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 6S61 | 10101 | 2024-03-15 | 2019-07-02 | 1.84 | 1.89 | 1.85 | 1.9 | 0.011 | 1.36 | 0.0 | 0.06 | 12.21 | 0.01 | 0.312 | 2.62 | 1.29 | 1.8 | 98.2 | 0.0 | 3.69 | 0.77 | 0.86 | 8.46 | 1.9 | 0.004 | 0.59 | 0.0 | 0.03 | 14.80 | 0.00 | 1.794 | 4.82 | 0.65 | 1.2 | 98.8 | 0.0 | 4.46 | 0.74 | 0.80 | 0.90 | 8.65 | 71060 | 4128 | 72 | 0 | 30 | 3854 | 32904 | logfile |