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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 6SZU | 10354 | 2023-04-23 | 2019-10-02 | 2.41 | 2.49 | 2.44 | 2.5 | 0.008 | 0.82 | 0.0 | 0.05 | 15.38 | 0.01 | 2.013 | 3.04 | 5.28 | 4.2 | 95.7 | 0.1 | -2.10 | 0.71 | 0.88 | 5.00 | 2.5 | 0.003 | 0.56 | 0.0 | 0.04 | 16.84 | 0.00 | 1.885 | 6.12 | 1.78 | 2.4 | 97.6 | 0.0 | 0.62 | 0.50 | 0.72 | 0.90 | 4.60 | 15245 | 1699 | 14 | 54 | 8 | 311 | 0 | logfile |
✔ | 7UZV | 26919 | 2023-04-21 | 2022-05-09 | 2.5 | 2.29 | 2.44 | 2.3 | 0.003 | 0.58 | 0.0 | 0.04 | 19.05 | 0.00 | 1.944 | 3.69 | 2.84 | 1.4 | 98.3 | 0.3 | 1.78 | 0.62 | 0.84 | 3.61 | 2.3 | 0.002 | 0.54 | 0.0 | 0.04 | 19.13 | 0.00 | 1.943 | 5.32 | 3.25 | 1.6 | 98.3 | 0.2 | 1.37 | 0.25 | 0.61 | 0.85 | 3.77 | 9274 | 584 | 4 | 0 | 0 | 63 | 4592 | logfile |
✔ | 7ZH1 | 14717 | 2023-04-27 | 2022-04-05 | 2.48 | 2.28 | 2.44 | 2.3 | 0.007 | 1.14 | 0.0 | 0.07 | 16.66 | 0.02 | 2.120 | 5.11 | 2.38 | 4.3 | 95.2 | 0.5 | -0.18 | 0.71 | 0.79 | 3.85 | 2.3 | 0.005 | 0.78 | 0.0 | 0.05 | 17.05 | 0.01 | 2.194 | 3.50 | 2.19 | 4.9 | 95.1 | 0.1 | -0.60 | 0.52 | 0.74 | 0.84 | 4.34 | 24501 | 3060 | 9 | 0 | 39 | 0 | 0 | logfile |
✔ | 8DBN | 27291 | 2023-04-23 | 2022-06-14 | 2.4 | 2.39 | 2.44 | 2.5 | 0.012 | 1.14 | 0.0 | 0.05 | 18.88 | 0.04 | 2.177 | 9.85 | 3.24 | 4.3 | 95.7 | 0.0 | 0.86 | 0.49 | 0.58 | 1.69 | 2.5 | 0.004 | 1.34 | 0.0 | 0.05 | 18.28 | 0.00 | 1.844 | 12.39 | 2.53 | 4.1 | 95.9 | 0.0 | -0.29 | 1.17 | 0.58 | 0.67 | 2.51 | 14244 | 1824 | 12 | 0 | 24 | 0 | 0 | logfile |
✔ | 7TBG | 25798 | 2023-04-28 | 2021-12-22 | 2.5 | 2.10 | 2.44 | 1.8 | 0.006 | 0.76 | 0.0 | 0.05 | 13.03 | 0.01 | 2.268 | 1.89 | 0.57 | 3.2 | 96.8 | 0.0 | 0.60 | 0.75 | 0.79 | 4.65 | 1.8 | 0.005 | 0.59 | 0.0 | 0.04 | 16.05 | 0.00 | 2.102 | 5.00 | 1.23 | 2.0 | 98.0 | 0.0 | 2.29 | 1.13 | 0.77 | 0.82 | 3.61 | 19679 | 1190 | 6 | 0 | 5 | 20 | 9858 | logfile |
✘ | 7ZL1 | 14774 | 2023-04-28 | 2022-04-13 | 2.5 | 2.06 | 2.45 | 2.4 | 0.007 | 0.88 | 0.0 | 0.06 | 14.64 | 0.01 | 2.033 | 2.59 | 0.65 | 5.7 | 93.3 | 1.0 | -0.02 | 0.73 | 0.86 | 6.02 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 27257 | 1720 | 24 | 0 | 8 | 379 | 13574 | logfile |
✔ | 7TVi | 26141 | 2023-04-23 | 2022-02-04 | 3.2 | 3.59 | 2.45 | 3.5 | 0.005 | 0.82 | 0.0 | 0.05 | 14.00 | 0.01 | 2.228 | 5.20 | 0.07 | 2.6 | 97.4 | 0.0 | -0.83 | 0.67 | 0.67 | 0.72 | 3.5 | 0.003 | 0.71 | 0.0 | 0.04 | 16.32 | 0.00 | 2.191 | 8.80 | 0.46 | 2.2 | 97.8 | 0.0 | -0.19 | 1.50 | 0.74 | 0.79 | 1.98 | 13746 | 1687 | 10 | 0 | 6 | 0 | 0 | logfile |
✔ | 8E2F | 27834 | 2023-04-22 | 2022-08-15 | 2.47 | 2.75 | 2.45 | 2.7 | 0.003 | 0.62 | 0.0 | 0.04 | 16.35 | 0.00 | 2.040 | 6.66 | 1.58 | 3.0 | 97.0 | 0.0 | 1.05 | 0.58 | 0.82 | 4.21 | 2.7 | 0.004 | 0.57 | 0.0 | 0.04 | 16.59 | 0.00 | 1.823 | 6.66 | 1.73 | 2.7 | 97.3 | 0.0 | 1.68 | 0.37 | 0.61 | 0.84 | 3.95 | 12305 | 771 | 1 | 0 | 0 | 0 | 6207 | logfile |
✔ | 7V0Q | 26948 | 2023-04-20 | 2022-05-10 | 2.5 | 2.22 | 2.45 | 2.2 | 0.004 | 0.61 | 0.0 | 0.04 | 18.36 | 0.00 | 2.227 | 3.48 | 2.15 | 1.1 | 98.9 | 0.0 | 1.64 | 0.60 | 0.89 | 5.35 | 2.2 | 0.003 | 0.57 | 0.0 | 0.04 | 18.66 | 0.00 | 2.150 | 4.54 | 2.86 | 1.2 | 98.8 | 0.0 | 1.61 | 0.49 | 0.59 | 0.89 | 5.64 | 5301 | 658 | 1 | 0 | 0 | 127 | 0 | logfile |
✔ | 8DM4 | 27526 | 2023-04-20 | 2022-07-08 | 2.45 | 2.88 | 2.45 | 2.8 | 0.006 | 0.90 | 0.0 | 0.06 | 13.13 | 0.01 | 2.259 | 4.06 | 0.23 | 4.1 | 95.9 | 0.0 | -0.05 | 0.69 | 0.81 | 4.67 | 2.9 | 0.003 | 0.60 | 0.0 | 0.04 | 15.96 | 0.00 | 2.258 | 9.27 | 1.83 | 3.7 | 96.3 | 0.0 | 0.36 | 1.53 | 0.67 | 0.82 | 5.08 | 4018 | 497 | 5 | 0 | 6 | 0 | 0 | logfile |
✔ | 7ZH3 | 14720 | 2023-04-20 | 2022-04-05 | 2.5 | 2.66 | 2.45 | 2.7 | 0.010 | 0.84 | 0.0 | 0.06 | 13.33 | 0.01 | 2.209 | 7.02 | 0.00 | 3.8 | 96.2 | 0.0 | -1.40 | 0.59 | 0.87 | 4.43 | 2.7 | 0.004 | 0.55 | 0.0 | 0.04 | 16.22 | 0.00 | 2.265 | 6.87 | 0.80 | 2.0 | 98.0 | 0.0 | 1.15 | 1.11 | 0.55 | 0.86 | 3.86 | 3301 | 407 | 4 | 0 | 1 | 38 | 0 | logfile |
✔ | 7S8L | 24896 | 2023-04-20 | 2021-09-18 | 2.45 | 2.08 | 2.46 | 1.7 | 0.003 | 0.56 | 0.0 | 0.04 | 12.22 | 0.00 | 2.238 | 2.45 | 0.00 | 3.5 | 96.5 | 0.0 | 1.27 | 0.81 | 0.80 | 4.28 | 1.6 | 0.003 | 0.61 | 0.0 | 0.04 | 15.52 | 0.00 | 2.231 | 3.14 | 1.70 | 3.2 | 96.8 | 0.0 | 1.39 | 0.34 | 0.84 | 0.84 | 3.79 | 8177 | 1096 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 7Ki1 | 22883 | 2023-04-21 | 2020-10-22 | 2.5 | 2.57 | 2.46 | 2.6 | 0.008 | 0.93 | 0.0 | 0.06 | 15.54 | 0.00 | 2.257 | 8.41 | 0.28 | 3.5 | 96.5 | 0.0 | -1.64 | 0.64 | 0.81 | 3.96 | 2.6 | 0.004 | 0.57 | 0.0 | 0.04 | 16.94 | 0.00 | 2.134 | 5.57 | 1.66 | 2.1 | 97.9 | 0.0 | 0.97 | 0.51 | 0.65 | 0.85 | 3.63 | 10265 | 1285 | 11 | 0 | 1 | 73 | 0 | logfile |
✔ | 7ZH4 | 14721 | 2023-04-19 | 2022-04-05 | 2.49 | 2.65 | 2.46 | 2.6 | 0.005 | 0.88 | 0.0 | 0.04 | 14.07 | 0.00 | 2.231 | 4.63 | 0.00 | 2.3 | 97.7 | 0.0 | -0.97 | 0.56 | 0.86 | 4.93 | 2.6 | 0.002 | 0.48 | 0.0 | 0.04 | 16.92 | 0.00 | 2.240 | 5.14 | 1.51 | 1.4 | 98.6 | 0.0 | 1.08 | 2.14 | 0.52 | 0.85 | 3.74 | 2957 | 362 | 4 | 0 | 2 | 39 | 0 | logfile |
✔ | 8CSW | 26973 | 2023-04-20 | 2022-05-13 | 2.5 | 2.22 | 2.46 | 2.3 | 0.007 | 0.86 | 0.0 | 0.06 | 14.46 | 0.01 | 2.219 | 5.03 | 2.33 | 1.2 | 98.8 | 0.0 | 0.83 | 0.64 | 0.88 | 6.02 | 2.3 | 0.002 | 0.52 | 0.0 | 0.04 | 16.70 | 0.00 | 2.152 | 4.25 | 1.25 | 1.4 | 98.6 | 0.0 | 1.11 | 0.50 | 0.62 | 0.88 | 5.56 | 5332 | 657 | 1 | 0 | 0 | 165 | 0 | logfile |
✔ | 6UDJ | 20739 | 2023-04-27 | 2019-09-19 | 2.5 | 2.60 | 2.46 | 2.6 | 0.010 | 1.16 | 0.0 | 0.07 | 13.98 | 0.01 | 2.252 | 3.11 | 0.41 | 4.1 | 95.8 | 0.1 | -1.93 | 0.71 | 0.85 | 4.78 | 2.6 | 0.004 | 0.68 | 0.0 | 0.05 | 16.32 | 0.00 | 2.015 | 6.64 | 2.36 | 3.3 | 96.7 | 0.0 | -0.07 | 0.42 | 0.71 | 0.86 | 4.46 | 26592 | 3090 | 72 | 0 | 177 | 45 | 0 | logfile |
✔ | 7WAF | 32384 | 2023-04-27 | 2021-12-14 | 2.52 | 2.97 | 2.47 | 2.8 | 0.003 | 0.58 | 0.0 | 0.05 | 13.61 | 0.00 | 1.339 | 7.48 | 0.11 | 3.7 | 96.3 | 0.1 | 0.15 | 0.80 | 0.87 | 3.60 | 2.8 | 0.002 | 0.52 | 0.0 | 0.04 | 15.40 | 0.00 | 1.948 | 7.32 | 1.15 | 3.3 | 96.6 | 0.1 | 0.37 | 0.91 | 0.80 | 0.90 | 3.30 | 24842 | 3226 | 16 | 0 | 20 | 0 | 0 | logfile |
✔ | 7N4T | 24177 | 2023-04-22 | 2021-06-04 | 2.4 | 3.03 | 2.47 | 2.8 | 0.004 | 0.90 | 1.0 | 0.05 | 14.86 | 0.00 | 2.198 | 7.06 | 0.14 | 6.0 | 94.0 | 0.0 | 0.31 | 0.81 | 0.86 | 4.16 | 2.8 | 0.003 | 0.61 | 0.0 | 0.04 | 16.53 | 0.00 | 2.128 | 7.02 | 0.87 | 5.2 | 94.8 | 0.0 | 0.12 | 1.57 | 0.74 | 0.84 | 3.87 | 12887 | 1603 | 14 | 0 | 7 | 0 | 0 | logfile |
✔ | 8DBM | 27290 | 2023-04-28 | 2022-06-14 | 2.4 | 2.48 | 2.47 | 2.5 | 0.011 | 0.82 | 0.0 | 0.06 | 16.47 | 0.00 | 1.884 | 7.64 | 2.67 | 3.3 | 96.7 | 0.0 | 0.14 | 0.68 | 0.82 | 4.58 | 2.4 | 0.003 | 0.52 | 0.0 | 0.05 | 16.98 | 0.00 | 1.939 | 9.86 | 2.89 | 2.8 | 97.2 | 0.0 | 0.68 | 0.45 | 0.70 | 0.86 | 4.19 | 28716 | 3708 | 36 | 0 | 48 | 24 | 0 | logfile |
✔ | 7XGR | 33187 | 2023-04-20 | 2022-04-06 | 2.6 | 3.38 | 2.47 | 3.2 | 0.004 | 0.71 | 0.0 | 0.04 | 18.88 | 0.00 | 2.259 | 8.70 | 2.17 | 6.3 | 93.7 | 0.0 | -0.28 | 0.52 | 0.75 | 2.35 | 3.2 | 0.002 | 0.61 | 0.0 | 0.03 | 19.07 | 0.00 | 2.203 | 7.19 | 1.96 | 5.8 | 94.2 | 0.0 | 2.24 | 1.25 | 0.55 | 0.83 | 2.09 | 4340 | 546 | 1 | 0 | 0 | 0 | 0 | logfile |