The table shows a selection of parameters. Activate more columns using
the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 8UF0 | 42181 | 2024-03-20 | 2023-10-03 | 2.02 | 2.34 | 2.08 | 2.2 | 0.007 | 0.76 | 0.0 | 0.05 | 17.50 | 0.01 | 0.013 | 4.37 | 0.54 | 1.8 | 98.2 | 0.0 | 0.09 | 0.84 | 0.89 | 5.17 | 2.2 | 0.003 | 0.62 | 0.0 | 0.05 | 17.90 | 0.01 | 2.125 | 3.00 | 1.19 | 1.1 | 98.9 | 0.0 | 1.26 | 0.34 | 0.82 | 0.88 | 4.15 | 27000 | 3456 | 48 | 0 | 0 | 804 | 0 | logfile |
✔ | 8oQ7 | 17107 | 2024-03-16 | 2023-04-11 | 2.2 | 2.13 | 2.08 | 2.2 | 0.009 | 0.90 | 0.0 | 0.09 | 10.86 | 0.01 | 2.290 | 1.40 | 0.33 | 1.5 | 98.5 | 0.0 | 2.27 | 0.73 | 0.85 | 5.65 | 2.1 | 0.004 | 0.65 | 0.0 | 0.04 | 14.19 | 0.00 | 2.096 | 1.65 | 1.59 | 2.3 | 97.7 | 0.0 | 2.16 | 1.01 | 0.73 | 0.86 | 5.76 | 14702 | 1680 | 15 | 0 | 57 | 505 | 0 | logfile |
✔ | 7JJP | 22358 | 2024-03-25 | 2020-07-27 | 1.94 | 2.15 | 2.08 | 2.1 | 0.011 | 0.87 | 0.0 | 0.07 | 13.34 | 0.01 | 2.228 | 2.51 | 0.56 | 1.6 | 98.4 | 0.0 | 0.39 | 0.71 | 0.85 | 5.30 | 2.1 | 0.002 | 0.51 | 0.0 | 0.04 | 14.29 | 0.00 | 2.106 | 6.58 | 0.93 | 1.3 | 98.7 | 0.0 | 3.57 | 0.92 | 0.71 | 0.87 | 4.96 | 40920 | 2352 | 36 | 0 | 180 | 396 | 19104 | logfile |
✔ | 6WX6 | 21951 | 2024-03-14 | 2020-05-09 | 2.0 | 2.11 | 2.08 | 2.1 | 0.006 | 0.69 | 0.0 | 0.04 | 14.94 | 0.00 | 2.277 | 0.00 | 0.00 | 1.2 | 98.8 | 0.0 | 1.60 | 0.77 | 0.88 | 7.70 | 2.1 | 0.003 | 0.51 | 0.0 | 0.03 | 16.14 | 0.00 | 2.032 | 2.91 | 0.69 | 1.2 | 98.8 | 0.0 | 4.80 | 0.56 | 0.79 | 0.90 | 7.39 | 68332 | 4128 | 56 | 0 | 8 | 2420 | 32664 | logfile |
✔ | 8SDU | 40352 | 2024-03-10 | 2023-04-07 | 2.05 | 2.16 | 2.08 | 2.1 | 0.002 | 0.49 | 0.0 | 0.04 | 14.85 | 0.00 | 2.231 | 4.34 | 0.71 | 1.0 | 99.0 | 0.0 | 2.05 | 0.74 | 0.85 | 5.13 | 2.1 | 0.002 | 0.53 | 0.0 | 0.04 | 15.10 | 0.00 | 2.223 | 3.70 | 1.19 | 1.0 | 99.0 | 0.0 | 2.93 | 0.23 | 0.73 | 0.85 | 4.81 | 3942 | 500 | 2 | 0 | 0 | 70 | 0 | logfile |
✔ | 8BJM | 16089 | 2024-03-17 | 2022-11-04 | 2.2 | 2.55 | 2.08 | 2.4 | 0.005 | 0.55 | 0.0 | 0.04 | 13.85 | 0.00 | 2.200 | 4.88 | 1.17 | 0.5 | 99.5 | 0.0 | 2.08 | 0.83 | 0.88 | 5.60 | 2.4 | 0.003 | 0.53 | 0.0 | 0.04 | 16.40 | 0.00 | 2.188 | 5.22 | 1.64 | 0.5 | 99.5 | 0.0 | 2.47 | 0.30 | 0.84 | 0.89 | 5.10 | 16655 | 2050 | 22 | 0 | 0 | 498 | 0 | logfile |
✔ | 7S1M | 24805 | 2024-03-14 | 2021-09-02 | 2.41 | 2.95 | 2.09 | 2.8 | 0.003 | 0.51 | 0.0 | 0.04 | 13.54 | 0.00 | 2.233 | 4.89 | 0.10 | 1.9 | 98.1 | 0.0 | 1.84 | 0.81 | 0.87 | 3.93 | 2.8 | 0.003 | 0.54 | 0.0 | 0.04 | 16.08 | 0.00 | 2.179 | 5.62 | 1.67 | 1.7 | 98.3 | 0.0 | 1.74 | 0.92 | 0.77 | 0.87 | 3.71 | 9160 | 1168 | 6 | 0 | 1 | 0 | 0 | logfile |
✔ | 6ZJA | 11233 | 2024-03-17 | 2020-06-28 | 2.0 | 2.10 | 2.09 | 2.1 | 0.006 | 0.86 | 0.0 | 0.06 | 14.31 | 0.01 | 1.974 | 0.60 | 1.37 | 4.1 | 95.9 | 0.0 | -0.40 | 0.79 | 0.87 | 6.97 | 2.1 | 0.003 | 0.66 | 0.0 | 0.05 | 16.08 | 0.00 | 1.872 | 1.50 | 0.82 | 4.0 | 96.0 | 0.0 | 0.09 | 0.39 | 0.78 | 0.90 | 6.80 | 77951 | 9684 | 60 | 0 | 36 | 3191 | 0 | logfile |
✔ | 8DBJ | 27286 | 2024-03-21 | 2022-06-14 | 2.0 | 2.02 | 2.09 | 2.0 | 0.012 | 1.17 | 0.0 | 0.06 | 18.16 | 0.04 | 1.910 | 5.96 | 1.15 | 4.3 | 95.7 | 0.0 | 0.57 | 0.74 | 0.86 | 6.19 | 2.0 | 0.003 | 1.62 | 0.0 | 0.05 | 16.48 | 0.00 | 1.836 | 5.12 | 1.84 | 3.8 | 96.2 | 0.0 | 0.68 | 0.91 | 0.75 | 0.90 | 6.06 | 28992 | 3708 | 36 | 0 | 60 | 24 | 0 | logfile |
✔ | 8BKB | 16095 | 2024-03-23 | 2022-11-08 | 2.2 | 1.97 | 2.09 | 2.0 | 0.003 | 0.61 | 0.0 | 0.04 | 17.88 | 0.00 | 2.225 | 1.59 | 1.40 | 1.4 | 98.6 | 0.0 | 4.82 | 0.71 | 0.86 | 6.67 | 2.0 | 0.005 | 0.68 | 0.0 | 0.04 | 17.67 | 0.01 | 2.092 | 3.51 | 2.00 | 1.8 | 98.2 | 0.0 | 4.47 | 0.14 | 0.71 | 0.87 | 7.13 | 35139 | 4128 | 54 | 0 | 6 | 1317 | 0 | logfile |
✔ | 7YPG | 33999 | 2024-03-10 | 2022-08-03 | 2.5 | 2.00 | 2.09 | 3.0 | 0.008 | 0.80 | 0.0 | 0.06 | 14.50 | 0.00 | 2.331 | 9.02 | 0.00 | 12.3 | 87.7 | 0.0 | -5.97 | 0.40 | 0.82 | 3.85 | 3.0 | 0.005 | 0.70 | 0.0 | 0.05 | 17.65 | 0.00 | 2.269 | 12.89 | 5.77 | 11.4 | 88.6 | 0.0 | -5.32 | 0.53 | 0.40 | 0.82 | 3.21 | 2676 | 354 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 8FoZ | 29357 | 2024-03-19 | 2023-01-03 | 2.0 | 2.03 | 2.09 | 2.0 | 0.009 | 0.91 | 0.0 | 0.06 | 15.79 | 0.01 | 2.238 | 2.94 | 1.31 | 0.5 | 99.5 | 0.0 | 0.22 | 0.80 | 0.91 | 7.15 | 2.0 | 0.002 | 0.51 | 0.0 | 0.04 | 15.74 | 0.00 | 2.290 | 3.01 | 1.23 | 1.4 | 98.6 | 0.0 | 0.78 | 0.24 | 0.79 | 0.91 | 6.99 | 23648 | 3072 | 16 | 0 | 16 | 0 | 0 | logfile |
✔ | 8Q9H | 18281 | 2024-03-11 | 2023-08-20 | 2.18 | 2.03 | 2.10 | 2.2 | 0.011 | 1.73 | 0.0 | 0.08 | 10.93 | 0.01 | 2.517 | 0.00 | 0.00 | 2.8 | 97.2 | 0.0 | -1.19 | 0.33 | 0.77 | 6.36 | 2.2 | 0.002 | 0.54 | 0.0 | 0.05 | 16.15 | 0.00 | 2.065 | 1.47 | 0.26 | 1.9 | 98.1 | 0.0 | -1.45 | 1.80 | 0.41 | 0.86 | 6.16 | 6822 | 438 | 6 | 0 | 0 | 0 | 3480 | logfile |
✔ | 8UD9 | 42148 | 2024-03-25 | 2023-09-28 | 2.04 | 2.16 | 2.10 | 2.1 | 0.005 | 0.58 | 0.0 | 0.10 | 17.07 | 0.00 | 2.235 | 2.23 | 0.15 | 1.7 | 98.3 | 0.0 | 1.27 | 0.81 | 0.90 | 6.09 | 2.1 | 0.003 | 0.58 | 0.0 | 0.04 | 17.57 | 0.00 | 2.164 | 4.30 | 1.90 | 1.5 | 98.5 | 0.0 | 1.57 | 0.38 | 0.82 | 0.90 | 5.98 | 49955 | 6264 | 58 | 0 | 2 | 1120 | 0 | logfile |
✔ | 8AZ4 | 15753 | 2024-03-10 | 2022-09-05 | 2.2 | 2.27 | 2.10 | 2.2 | 0.006 | 0.72 | 0.0 | 0.05 | 10.22 | 0.00 | 2.292 | 1.89 | 0.00 | 7.7 | 92.3 | 0.0 | -3.94 | 0.57 | 0.88 | 8.31 | 2.2 | 0.004 | 0.69 | 0.0 | 0.05 | 13.32 | 0.00 | 2.281 | 2.83 | 2.92 | 7.7 | 92.3 | 0.0 | -4.28 | 0.47 | 0.59 | 0.91 | 7.74 | 2280 | 280 | 20 | 0 | 10 | 100 | 0 | logfile |
✔ | 8D1G | 27129 | 2024-03-17 | 2022-05-27 | 2.07 | 2.29 | 2.10 | 2.3 | 0.006 | 0.69 | 0.0 | 0.04 | 20.60 | 0.00 | 2.207 | 13.54 | 0.66 | 1.2 | 98.8 | 0.0 | 1.81 | 0.74 | 0.85 | 5.81 | 2.3 | 0.003 | 0.55 | 0.0 | 0.04 | 16.57 | 0.00 | 2.164 | 7.49 | 0.66 | 1.2 | 98.8 | 0.0 | 1.94 | 0.90 | 0.71 | 0.86 | 5.52 | 16201 | 1735 | 15 | 0 | 61 | 620 | 0 | logfile |
✔ | 8A2Y | 15108 | 2024-03-16 | 2022-06-06 | 2.15 | 2.21 | 2.10 | 2.2 | 0.005 | 0.61 | 0.0 | 0.05 | 13.42 | 0.00 | 2.177 | 2.39 | 0.64 | 1.9 | 98.1 | 0.0 | -1.01 | 0.72 | 0.87 | 6.39 | 2.2 | 0.005 | 0.68 | 0.0 | 0.05 | 16.06 | 0.00 | 2.123 | 3.88 | 0.90 | 1.3 | 98.7 | 0.0 | 0.77 | 0.82 | 0.72 | 0.89 | 6.21 | 15078 | 1835 | 15 | 0 | 15 | 528 | 0 | logfile |
✔ | 8GZ8 | 34392 | 2024-03-10 | 2022-09-26 | 2.35 | 2.27 | 2.10 | 2.5 | 0.005 | 0.73 | 0.0 | 0.06 | 14.15 | 0.00 | 2.500 | 6.32 | 0.00 | 0.5 | 99.5 | 0.0 | -0.71 | 0.43 | 0.88 | 4.53 | 2.6 | 0.005 | 0.69 | 0.0 | 0.06 | 14.97 | 0.00 | 2.213 | 4.36 | 2.92 | 1.4 | 98.6 | 0.0 | -0.66 | 0.87 | 0.42 | 0.90 | 4.58 | 3336 | 540 | 71 | 0 | 0 | 20 | 0 | logfile |
✔ | 6SK0 | 10219 | 2024-03-10 | 2019-08-14 | 2.3 | 2.30 | 2.11 | 2.2 | 0.008 | 0.74 | 0.0 | 0.05 | 15.85 | 0.00 | 2.202 | 9.23 | 0.97 | 3.3 | 96.7 | 0.0 | -1.30 | 0.70 | 0.83 | 6.89 | 2.2 | 0.004 | 0.65 | 0.0 | 0.05 | 17.13 | 0.00 | 2.176 | 10.00 | 0.49 | 3.2 | 96.8 | 0.0 | -1.33 | 1.49 | 0.80 | 0.90 | 6.86 | 5826 | 792 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 6X19 | 21993 | 2024-03-15 | 2020-05-18 | 2.1 | 2.20 | 2.11 | 2.1 | 0.009 | 1.29 | 6.0 | 0.08 | 14.32 | 0.01 | 2.134 | 12.92 | 1.01 | 2.7 | 97.3 | 0.1 | -1.61 | 0.73 | 0.84 | 4.93 | 2.2 | 0.004 | 0.78 | 0.0 | 0.04 | 16.72 | 0.00 | 2.088 | 6.24 | 1.10 | 2.7 | 97.3 | 0.0 | 1.01 | 1.30 | 0.72 | 0.88 | 4.64 | 10277 | 1258 | 9 | 0 | 1 | 136 | 0 | logfile |