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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✘ | 7E9G | 31031 | 2022-04-06 | 2021-03-04 | 3.5 | 2.34 | — | 1.9 | 0.006 | 0.52 | 0.0 | 0.06 | 11.69 | 0.01 | 2.229 | 8.14 | 0.00 | 4.0 | 96.0 | 0.0 | -3.14 | 0.70 | 0.66 | 1.29 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 18816 | 2557 | 10 | 0 | 3 | 0 | 0 | logfile |
✔ | 7E9H | 31032 | 2022-04-06 | 2021-03-04 | 4.0 | 2.62 | — | 1.9 | 0.003 | 0.48 | 0.0 | 0.04 | 11.36 | 0.00 | 2.202 | 8.01 | 0.06 | 2.9 | 97.1 | 0.0 | -2.83 | 0.68 | 0.61 | — | 1.9 | 0.007 | 0.92 | 0.0 | 0.04 | 15.19 | 0.01 | 2.081 | 15.43 | 0.24 | 5.1 | 94.9 | 0.0 | -1.08 | 2.01 | 0.71 | 0.67 | — | 16847 | 2309 | 8 | 0 | 0 | 0 | 0 | logfile |
✔ | 7RCV | 24407 | 2022-04-04 | 2021-07-08 | 2.01 | 1.78 | — | 1.9 | 0.023 | 2.41 | 0.0 | 0.13 | 20.43 | 0.01 | 1.915 | 13.88 | 1.99 | 2.6 | 97.4 | 0.0 | 0.92 | 0.78 | 0.79 | 5.10 | 1.9 | 0.005 | 0.87 | 0.0 | 0.05 | 19.00 | 0.01 | 2.033 | 12.58 | 1.99 | 2.7 | 97.2 | 0.0 | 0.62 | 0.91 | 0.80 | 0.82 | 5.27 | 54656 | 5544 | 114 | 0 | 228 | 1236 | 0 | logfile |
✔ | 7TDF | 25827 | 2022-04-07 | 2021-12-31 | 2.7 | 2.10 | 2.66 | 1.9 | 0.006 | 0.74 | 0.0 | 0.05 | 12.56 | 0.01 | 2.148 | 2.71 | 0.19 | 3.5 | 96.5 | 0.0 | 0.06 | 0.74 | 0.77 | 4.39 | 1.9 | 0.006 | 0.65 | 0.0 | 0.04 | 15.41 | 0.01 | 2.090 | 5.68 | 1.04 | 2.9 | 97.1 | 0.0 | 2.17 | 1.14 | 0.76 | 0.80 | 3.77 | 19566 | 1188 | 2 | 0 | 0 | 0 | 9792 | logfile |
✔ | 6TAX | 10429 | 2022-04-08 | 2019-10-31 | 3.2 | 2.63 | — | 1.9 | 0.009 | 1.13 | 0.0 | 0.06 | 11.18 | 0.01 | 2.065 | 5.46 | 0.46 | 9.5 | 90.3 | 0.2 | -4.10 | 0.88 | 0.80 | 3.18 | 1.9 | 0.009 | 0.88 | 1.0 | 0.04 | 13.78 | 0.01 | 1.933 | 11.83 | 0.08 | 8.2 | 91.8 | 0.0 | -0.33 | 1.90 | 0.89 | 0.82 | 2.08 | 35235 | 4349 | 1 | 0 | 71 | 0 | 0 | logfile |
✔ | 6ZGL | 11210 | 2022-04-05 | 2020-06-19 | 1.9 | 1.87 | — | 1.9 | 0.013 | 1.55 | 0.0 | 0.12 | 15.52 | 0.01 | 2.196 | 9.00 | 3.73 | 1.1 | 98.9 | 0.0 | 0.13 | 0.73 | 0.83 | 7.03 | 1.9 | 0.003 | 0.56 | 0.0 | 0.04 | 15.75 | 0.00 | 2.118 | 4.55 | 1.00 | 0.6 | 99.4 | 0.0 | 3.59 | 0.75 | 0.76 | 0.83 | 7.07 | 15760 | 1848 | 24 | 0 | 0 | 964 | 0 | logfile |
✔ | 6WWR | 21945 | 2022-04-04 | 2020-05-09 | 2.7 | 2.08 | 2.69 | 1.9 | 0.009 | 0.96 | 1.0 | 0.06 | 14.63 | 0.01 | 1.967 | 5.29 | 0.57 | 5.8 | 94.2 | 0.0 | -3.62 | 0.60 | 0.77 | 5.00 | 2.0 | 0.004 | 0.67 | 0.0 | 0.04 | 16.99 | 0.00 | 1.916 | 6.86 | 1.72 | 3.9 | 96.1 | 0.0 | -0.28 | 1.08 | 0.62 | 0.84 | 3.85 | 9719 | 1220 | 6 | 1 | 4 | 0 | 0 | logfile |
✔ | 7SQG | 25384 | 2022-04-04 | 2021-11-05 | 2.6 | 2.14 | — | 1.9 | 0.004 | 0.56 | 0.0 | 0.05 | 14.80 | 0.00 | 2.423 | 3.35 | 0.00 | 3.0 | 97.0 | 0.0 | 1.39 | 0.75 | 0.77 | 3.39 | 1.8 | 0.006 | 0.67 | 0.0 | 0.05 | 18.89 | 0.01 | 2.071 | 8.16 | 1.88 | 4.2 | 95.8 | 0.0 | 1.28 | 0.97 | 0.81 | 0.82 | 3.52 | 6630 | 810 | 6 | 0 | 12 | 0 | 0 | logfile |
✔ | 6WWU | 21948 | 2022-04-04 | 2020-05-09 | 2.7 | 2.08 | 2.76 | 1.9 | 0.011 | 1.26 | 1.0 | 0.06 | 16.22 | 0.02 | 2.072 | 6.82 | 2.78 | 5.8 | 94.0 | 0.2 | -3.98 | 0.60 | 0.76 | 4.02 | 1.9 | 0.004 | 0.64 | 0.0 | 0.04 | 17.69 | 0.00 | 1.980 | 7.14 | 2.30 | 3.6 | 96.4 | 0.1 | -0.47 | 0.68 | 0.61 | 0.82 | 4.01 | 9688 | 1216 | 6 | 1 | 4 | 0 | 0 | logfile |
✔ | 7o6Q | 12740 | 2022-04-04 | 2021-04-12 | 1.88 | 2.21 | — | 1.9 | 0.010 | 0.71 | 0.0 | 0.05 | 12.80 | 0.01 | 2.115 | 4.83 | 1.25 | 3.2 | 96.8 | 0.0 | -1.61 | 0.88 | 0.85 | 7.59 | 1.9 | 0.002 | 0.47 | 0.0 | 0.04 | 14.46 | 0.00 | 2.188 | 5.16 | 1.63 | 0.8 | 99.2 | 0.0 | 3.35 | 0.36 | 0.90 | 0.90 | 6.06 | 7999 | 997 | 8 | 0 | 0 | 399 | 0 | logfile |
✔ | 7S8o | 24899 | 2022-04-04 | 2021-09-18 | 2.58 | 2.12 | 2.59 | 1.9 | 0.008 | 0.79 | 0.0 | 0.05 | 13.16 | 0.00 | 2.102 | 3.18 | 0.00 | 5.8 | 94.2 | 0.0 | 0.31 | 0.81 | 0.80 | 4.50 | 1.9 | 0.008 | 0.99 | 0.0 | 0.04 | 15.83 | 0.00 | 2.222 | 3.55 | 1.61 | 4.2 | 95.8 | 0.0 | 0.97 | 0.38 | 0.84 | 0.83 | 3.24 | 8331 | 1101 | 6 | 0 | 1 | 0 | 0 | logfile |
✘ | 7EFD | 31084 | 2022-04-06 | 2021-03-21 | 1.77 | 1.79 | 1.83 | 1.9 | 0.033 | 3.16 | 60.0 | 0.09 | 15.47 | 0.02 | 0.000 | 2.38 | 2.15 | 1.7 | 97.5 | 0.8 | -0.54 | 0.71 | 0.78 | 5.66 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 20020 | 2400 | 20 | 0 | 20 | 780 | 0 | logfile |
✔ | 7WPE | 32684 | 2022-04-08 | 2022-01-23 | 2.69 | 2.24 | — | 1.9 | 0.003 | 0.58 | 3.0 | 0.08 | 13.18 | 0.00 | 1.889 | 4.58 | 0.12 | 3.2 | 96.8 | 0.0 | 0.32 | 0.73 | 0.76 | 3.30 | 2.1 | 0.007 | 0.68 | 0.0 | 0.05 | 14.99 | 0.01 | 2.048 | 7.36 | 1.98 | 4.2 | 95.8 | 0.0 | -0.02 | 0.94 | 0.75 | 0.79 | 3.00 | 32038 | 4187 | 14 | 0 | 40 | 0 | 0 | logfile |
✘ | 7D1T | 30547 | 2022-04-04 | 2020-09-15 | 1.95 | 1.88 | 1.89 | 1.9 | 0.019 | 1.81 | 31.0 | 0.10 | 18.45 | 0.02 | 1.200 | 3.33 | 2.40 | 1.9 | 97.9 | 0.2 | -0.93 | 0.77 | 0.85 | 6.98 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 52994 | 5312 | 108 | 0 | 196 | 2432 | 0 | logfile |
✔ | 7WP9 | 32679 | 2022-04-07 | 2022-01-23 | 2.56 | 2.20 | — | 1.9 | 0.003 | 0.76 | 1.0 | 0.05 | 14.22 | 0.01 | 2.294 | 4.05 | 0.40 | 4.9 | 95.0 | 0.1 | -4.01 | 0.71 | 0.72 | 2.33 | 2.0 | 0.005 | 0.64 | 0.0 | 0.05 | 16.42 | 0.00 | 2.068 | 8.95 | 2.25 | 5.0 | 95.0 | 0.0 | -1.52 | 1.00 | 0.75 | 0.79 | 2.39 | 25077 | 3141 | 13 | 0 | 28 | 0 | 0 | logfile |
✔ | 6S61 | 10101 | 2022-04-06 | 2019-07-02 | 1.84 | 1.89 | 1.85 | 1.9 | 0.011 | 1.36 | 0.0 | 0.06 | 12.21 | 0.01 | 0.312 | 2.62 | 1.29 | 1.8 | 98.2 | 0.0 | 3.69 | 0.77 | 0.86 | 8.46 | 1.9 | 0.003 | 0.57 | 0.0 | 0.03 | 14.82 | 0.00 | 1.798 | 5.19 | 0.65 | 1.8 | 98.2 | 0.0 | 4.54 | 0.74 | 0.79 | 0.89 | 8.65 | 71060 | 4128 | 72 | 0 | 30 | 3854 | 32904 | logfile |
✔ | 7K00 | 22586 | 2022-04-13 | 2020-09-02 | 1.98 | 1.72 | — | 1.9 | 0.007 | 0.97 | 3.0 | 0.05 | 15.24 | 0.02 | 1.588 | 7.39 | 6.32 | 3.9 | 96.0 | 0.1 | -1.76 | 0.69 | 0.83 | 5.00 | 1.8 | 0.005 | 0.76 | 0.0 | 0.04 | 15.22 | 0.01 | 1.797 | 7.93 | 2.97 | 3.7 | 96.2 | 0.0 | 0.22 | 0.86 | 0.70 | 0.86 | 4.93 | 149338 | 5585 | 117 | 4555 | 331 | 7248 | 0 | logfile |
✘ | 7EFC | 31083 | 2022-04-06 | 2021-03-21 | 1.7 | 1.76 | 1.83 | 1.9 | 0.032 | 3.16 | 80.0 | 0.09 | 15.03 | 0.02 | 0.000 | 3.39 | 2.15 | 2.5 | 96.6 | 0.8 | -0.84 | 0.73 | 0.80 | 6.33 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 20020 | 2400 | 20 | 0 | 20 | 780 | 0 | logfile |
✔ | 7VUH | 32128 | 2022-04-04 | 2021-11-02 | 3.22 | 2.19 | — | 1.9 | 0.003 | 0.64 | 0.0 | 0.04 | 13.57 | 0.00 | 2.099 | 13.73 | 0.00 | 6.2 | 93.8 | 0.0 | -1.87 | 0.71 | 0.69 | 2.81 | 1.9 | 0.004 | 0.65 | 0.0 | 0.04 | 15.83 | 0.01 | 2.007 | 13.91 | 0.33 | 5.5 | 94.5 | 0.0 | -1.24 | 0.38 | 0.71 | 0.72 | 2.33 | 8302 | 1042 | 5 | 0 | 1 | 0 | 0 | logfile |
✔ | 7N8o | 24239 | 2022-04-04 | 2021-06-15 | 1.93 | 1.73 | — | 1.9 | 0.024 | 2.42 | 0.0 | 0.13 | 20.30 | 0.01 | 1.522 | 14.72 | 1.91 | 3.0 | 96.9 | 0.1 | 0.75 | 0.73 | 0.75 | 5.48 | 1.8 | 0.005 | 0.83 | 0.0 | 0.05 | 18.83 | 0.01 | 2.013 | 12.22 | 1.75 | 2.8 | 97.2 | 0.0 | 1.06 | 0.34 | 0.75 | 0.78 | 5.36 | 54656 | 5544 | 113 | 0 | 228 | 1236 | 0 | logfile |