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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 8CPM | 16783 | 2024-03-23 | 2023-03-03 | 1.81 | 1.57 | 1.84 | 1.6 | 0.005 | 0.85 | 0.0 | 0.05 | 15.21 | 0.01 | 1.916 | 7.77 | 0.00 | 1.0 | 99.0 | 0.0 | 2.32 | 0.70 | 0.75 | 7.56 | 1.6 | 0.003 | 0.58 | 0.0 | 0.04 | 16.44 | 0.00 | 2.052 | 6.36 | 0.63 | 2.2 | 97.8 | 0.0 | 4.49 | 0.34 | 0.71 | 0.77 | 7.63 | 36090 | 4152 | 72 | 0 | 38 | 1972 | 0 | logfile |
✔ | 7M4U | 23666 | 2024-03-10 | 2021-03-22 | 2.71 | 1.78 | — | 1.6 | 0.006 | 0.58 | 2.0 | 0.04 | 22.58 | 0.02 | 1.771 | 4.42 | 0.20 | 3.1 | 96.7 | 0.2 | 1.08 | 0.79 | 0.76 | 3.70 | 1.6 | 0.003 | 0.67 | 0.0 | 0.04 | 22.64 | 0.01 | 1.830 | 6.01 | 3.02 | 3.2 | 96.5 | 0.2 | 0.92 | 1.72 | 0.82 | 0.80 | 3.49 | 51764 | 2386 | 27 | 1528 | 84 | 191 | 0 | logfile |
✔ | 8CPX | 16789 | 2024-03-23 | 2023-03-03 | 1.76 | 1.61 | 1.78 | 1.6 | 0.005 | 0.80 | 0.0 | 0.06 | 14.97 | 0.01 | 2.063 | 5.37 | 0.00 | 1.0 | 99.0 | 0.0 | 2.18 | 0.75 | 0.81 | 8.02 | 1.6 | 0.003 | 0.65 | 0.0 | 0.04 | 15.93 | 0.00 | 2.149 | 4.02 | 1.31 | 1.2 | 98.8 | 0.0 | 3.96 | 0.38 | 0.79 | 0.85 | 7.66 | 35827 | 4152 | 72 | 0 | 38 | 1709 | 0 | logfile |
✘ | 8CS9 | 26960 | 2024-03-12 | 2022-05-12 | 2.74 | 1.95 | — | 1.6 | 0.006 | 0.85 | 0.0 | 0.05 | 18.63 | 0.01 | 2.218 | 10.20 | 3.66 | 2.2 | 97.5 | 0.3 | 0.33 | 0.82 | 0.81 | 3.50 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 60944 | 7677 | 39 | 0 | 27 | 268 | 0 | logfile |
✔ | 8FEG | 29026 | 2024-03-11 | 2022-12-06 | 2.54 | 2.10 | 2.57 | 1.6 | 0.014 | 0.96 | 0.0 | 0.15 | 14.30 | 0.01 | 2.217 | 8.48 | 1.52 | 5.0 | 93.9 | 1.1 | -0.96 | 0.75 | 0.75 | 3.13 | 1.9 | 0.004 | 0.80 | 0.0 | 0.06 | 16.01 | 0.00 | 2.159 | 8.42 | 3.05 | 4.2 | 95.8 | 0.0 | 0.22 | 0.94 | 0.78 | 0.80 | 2.64 | 8539 | 1105 | 7 | 0 | 5 | 2 | 0 | logfile |
✔ | 7U9X | 26409 | 2024-03-18 | 2022-03-11 | 2.58 | 2.84 | — | 1.7 | 0.003 | 0.61 | 0.0 | 0.04 | 14.38 | 0.00 | 2.080 | 9.25 | 0.11 | 2.3 | 97.7 | 0.0 | 1.30 | 0.87 | 0.83 | 3.55 | 1.7 | 0.005 | 0.67 | 0.0 | 0.04 | 15.32 | 0.00 | 2.079 | 8.17 | 0.55 | 3.1 | 96.9 | 0.0 | 1.53 | 0.41 | 0.88 | 0.87 | 4.08 | 138588 | 17324 | 12 | 0 | 12 | 0 | 0 | logfile |
✔ | 7P13 | 13154 | 2024-03-16 | 2021-07-01 | 2.29 | 1.96 | 2.28 | 1.7 | 0.016 | 1.06 | 0.0 | 0.07 | 14.07 | 0.01 | 2.430 | 5.24 | 0.00 | 3.3 | 96.7 | 0.0 | 2.06 | 0.82 | 0.87 | 4.22 | 1.6 | 0.002 | 0.46 | 0.0 | 0.03 | 17.13 | 0.00 | 2.108 | 15.11 | 1.52 | 2.4 | 97.6 | 0.0 | 5.18 | 0.51 | 0.83 | 0.87 | 3.53 | 13727 | 1743 | 7 | 0 | 0 | 0 | 154 | logfile |
✔ | 7MW6 | 24064 | 2024-03-23 | 2021-05-15 | 3.22 | 2.55 | — | 1.7 | 0.005 | 0.84 | 1.0 | 0.09 | 16.60 | 0.01 | 1.556 | 11.05 | 0.13 | 5.1 | 94.2 | 0.7 | -1.15 | 0.80 | 0.77 | 2.91 | 1.7 | 0.004 | 0.73 | 0.0 | 0.05 | 14.33 | 0.01 | 2.107 | 11.68 | 1.39 | 5.7 | 93.8 | 0.6 | -0.53 | 0.44 | 0.84 | 0.84 | 2.85 | 35247 | 4446 | 45 | 0 | 87 | 0 | 0 | logfile |
✔ | 7UA3 | 26413 | 2024-03-27 | 2022-03-11 | 2.97 | 3.02 | — | 1.7 | 0.003 | 0.69 | 0.0 | 0.04 | 14.13 | 0.01 | 1.967 | 9.63 | 0.52 | 3.9 | 95.9 | 0.2 | 1.12 | 0.85 | 0.80 | 3.29 | 1.8 | 0.005 | 0.65 | 1.0 | 0.04 | 15.04 | 0.00 | 1.628 | 11.05 | 0.56 | 3.7 | 96.1 | 0.2 | 1.37 | 0.35 | 0.87 | 0.84 | 3.27 | 150252 | 18768 | 16 | 0 | 12 | 0 | 0 | logfile |
✔ | 8FKY | 29261 | 2024-03-03 | 2022-12-21 | 2.67 | 2.81 | 2.79 | 1.7 | 0.003 | 0.54 | 0.0 | 0.03 | 20.11 | 0.00 | 1.992 | 1.72 | 0.01 | 1.1 | 98.9 | 0.0 | 1.90 | 0.77 | 0.80 | 3.39 | 1.7 | 0.003 | 0.54 | 0.0 | 0.04 | 20.43 | 0.00 | 1.956 | 5.62 | 1.31 | 2.1 | 97.9 | 0.0 | 1.56 | 0.42 | 0.80 | 0.86 | 3.07 | 158284 | 12402 | 72 | 2810 | 75 | 0 | 0 | logfile |
✔ | 7oUF | 13075 | 2024-03-16 | 2021-06-11 | 3.0 | 2.26 | 3.10 | 1.7 | 0.005 | 0.56 | 0.0 | 0.04 | 17.51 | 0.00 | 1.686 | 6.25 | 0.14 | 1.8 | 98.2 | 0.0 | 0.10 | 0.78 | 0.75 | 3.06 | 2.0 | 0.004 | 0.70 | 0.0 | 0.04 | 19.90 | 0.01 | 1.850 | 9.73 | 2.95 | 3.0 | 97.0 | 0.0 | 0.03 | 1.29 | 0.79 | 0.80 | 2.73 | 15094 | 1664 | 16 | 80 | 10 | 12 | 0 | logfile |
✔ | 8oR0 | 17114 | 2024-03-17 | 2023-04-12 | 3.1 | 2.37 | 2.99 | 1.7 | 0.004 | 0.64 | 1.0 | 0.04 | 15.61 | 0.00 | 1.149 | 6.33 | 0.51 | 3.9 | 96.1 | 0.0 | 0.59 | 0.64 | 0.56 | 0.20 | 1.5 | 0.003 | 0.67 | 0.0 | 0.04 | 16.52 | 0.00 | 2.066 | 11.47 | 2.41 | 4.3 | 95.7 | 0.0 | 0.21 | 1.27 | 0.69 | 0.64 | 0.60 | 18823 | 2489 | 8 | 0 | 3 | 0 | 0 | logfile |
✔ | 8D33 | 27154 | 2024-03-16 | 2022-05-31 | 2.46 | 2.01 | 2.48 | 1.7 | 0.003 | 0.55 | 0.0 | 0.04 | 13.19 | 0.00 | 2.091 | 4.01 | 0.39 | 3.5 | 96.5 | 0.1 | 0.90 | 0.73 | 0.78 | 3.10 | 1.6 | 0.003 | 0.61 | 0.0 | 0.04 | 18.11 | 0.00 | 2.153 | 7.45 | 2.91 | 3.1 | 96.9 | 0.1 | 0.65 | 1.32 | 0.73 | 0.79 | 2.91 | 15272 | 1784 | 6 | 46 | 2 | 0 | 0 | logfile |
✔ | 8CEU | 16613 | 2024-03-19 | 2023-02-02 | 1.83 | 1.74 | 1.82 | 1.7 | 0.009 | 1.56 | 16.0 | 0.11 | 22.49 | 0.02 | 1.830 | 0.53 | 0.65 | 2.7 | 97.2 | 0.0 | -1.11 | 0.79 | 0.85 | 6.99 | 1.7 | 0.006 | 0.92 | 16.0 | 0.05 | 22.81 | 0.01 | 1.795 | 4.08 | 0.77 | 2.0 | 98.0 | 0.0 | -0.32 | 0.19 | 0.84 | 0.89 | 6.88 | 92838 | 3076 | 79 | 2872 | 304 | 6830 | 0 | logfile |
✔ | 7UA4 | 26414 | 2024-03-24 | 2022-03-11 | 2.93 | 3.30 | — | 1.7 | 0.003 | 0.71 | 0.0 | 0.04 | 14.56 | 0.01 | 1.425 | 10.26 | 1.34 | 3.6 | 96.3 | 0.1 | 1.05 | 0.87 | 0.82 | 3.16 | 1.7 | 0.006 | 0.77 | 2.0 | 0.04 | 15.17 | 0.00 | 1.829 | 11.50 | 0.51 | 3.8 | 96.1 | 0.1 | 1.10 | 1.23 | 0.88 | 0.85 | 3.33 | 147856 | 18472 | 16 | 0 | 20 | 0 | 0 | logfile |
✔ | 7U9T | 26408 | 2024-03-21 | 2022-03-11 | 2.68 | 3.04 | — | 1.7 | 0.004 | 0.81 | 2.0 | 0.04 | 14.98 | 0.01 | 2.097 | 10.70 | 1.89 | 3.5 | 96.4 | 0.1 | 0.12 | 0.86 | 0.80 | 2.51 | 1.7 | 0.003 | 0.66 | 0.0 | 0.04 | 15.16 | 0.00 | 2.176 | 9.31 | 0.68 | 3.3 | 96.6 | 0.1 | 1.11 | 0.52 | 0.87 | 0.85 | 3.08 | 143236 | 17912 | 16 | 0 | 12 | 0 | 0 | logfile |
✔ | 8T4S | 41039 | 2024-03-16 | 2023-06-09 | 2.6 | 2.55 | — | 1.7 | 0.005 | 0.70 | 0.0 | 0.05 | 23.99 | 0.01 | 1.654 | 12.19 | 3.03 | 4.5 | 95.1 | 0.4 | -0.03 | 0.89 | 0.87 | 3.39 | 1.6 | 0.005 | 0.65 | 0.0 | 0.04 | 23.46 | 0.01 | 1.847 | 9.17 | 2.84 | 4.4 | 95.3 | 0.3 | 0.19 | 1.11 | 0.89 | 0.87 | 3.30 | 74894 | 4895 | 42 | 1671 | 100 | 4 | 0 | logfile |
✔ | 7S3H | 24823 | 2024-03-14 | 2021-09-06 | 2.5 | 2.10 | 2.54 | 1.7 | 0.009 | 1.08 | 0.0 | 0.05 | 18.36 | 0.01 | 2.234 | 3.77 | 0.11 | 3.7 | 96.3 | 0.0 | -1.50 | 0.75 | 0.71 | 1.79 | 1.7 | 0.003 | 0.65 | 0.0 | 0.04 | 19.97 | 0.00 | 2.144 | 11.87 | 2.50 | 3.3 | 96.7 | 0.0 | -0.06 | 0.75 | 0.79 | 0.77 | 2.35 | 9966 | 1030 | 4 | 75 | 1 | 0 | 0 | logfile |
✔ | 7SX3 | 25492 | 2024-03-23 | 2021-11-22 | 3.1 | 2.52 | 3.30 | 1.7 | 0.004 | 0.66 | 0.0 | 0.04 | 14.79 | 0.01 | 2.199 | 3.25 | 0.00 | 2.8 | 97.2 | 0.0 | 0.09 | 0.73 | 0.81 | 2.40 | 1.8 | 0.002 | 0.59 | 0.0 | 0.04 | 16.18 | 0.00 | 2.099 | 6.03 | 1.18 | 2.2 | 97.8 | 0.0 | 2.44 | 0.44 | 0.74 | 0.84 | 1.66 | 37959 | 4608 | 6 | 0 | 85 | 0 | 0 | logfile |
✔ | 8FHK | 29087 | 2024-03-18 | 2022-12-14 | 2.9 | 2.20 | — | 1.7 | 0.008 | 1.17 | 1.0 | 0.06 | 18.88 | 0.02 | 2.200 | 7.55 | 0.39 | 7.0 | 93.0 | 0.0 | -1.60 | 0.73 | 0.68 | 1.79 | 1.7 | 0.003 | 0.61 | 0.0 | 0.04 | 17.81 | 0.00 | 1.856 | 11.42 | 1.64 | 7.2 | 92.7 | 0.1 | -0.78 | 1.29 | 0.75 | 0.73 | 1.80 | 19947 | 1219 | 4 | 0 | 20 | 0 | 9827 | logfile |