The table shows a selection of parameters. Activate more columns using
the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 8CPT | 16785 | 2023-11-21 | 2023-03-03 | 1.79 | 1.72 | 1.81 | 1.8 | 0.004 | 0.72 | 0.0 | 0.05 | 15.65 | 0.01 | 2.157 | 1.26 | 0.49 | 1.0 | 99.0 | 0.0 | 2.30 | 0.80 | 0.85 | 8.36 | 1.8 | 0.003 | 0.58 | 0.0 | 0.04 | 16.07 | 0.00 | 2.206 | 1.20 | 0.65 | 1.8 | 98.2 | 0.0 | 4.32 | 0.33 | 0.81 | 0.87 | 8.14 | 36024 | 4152 | 72 | 0 | 38 | 1906 | 0 | logfile |
✔ | 8CGU | 16651 | 2023-11-21 | 2023-02-06 | 1.89 | 1.60 | 1.82 | 1.8 | 0.009 | 1.59 | 1.0 | 0.11 | 13.35 | 0.02 | 1.895 | 0.38 | 0.38 | 2.4 | 97.6 | 0.0 | -0.61 | 0.60 | 0.81 | 6.95 | 1.8 | 0.003 | 0.65 | 0.0 | 0.04 | 13.59 | 0.01 | 1.845 | 5.16 | 0.58 | 1.8 | 98.2 | 0.0 | 1.19 | 2.29 | 0.70 | 0.87 | 6.09 | 35196 | 1266 | 31 | 1078 | 87 | 1871 | 0 | logfile |
✔ | 7UUR | 26801 | 2023-11-16 | 2022-04-28 | 1.67 | 1.76 | 1.67 | 1.8 | 0.061 | 2.45 | 3.0 | 0.98 | 14.57 | 0.01 | 1.674 | 7.19 | 0.44 | 2.5 | 97.2 | 0.2 | -0.89 | 0.76 | 0.87 | 7.87 | 1.8 | 0.007 | 2.49 | 0.0 | 0.07 | 14.70 | 0.01 | 1.611 | 10.87 | 0.29 | 2.1 | 97.9 | 0.0 | 0.19 | 0.27 | 0.77 | 0.88 | 7.79 | 13683 | 1668 | 12 | 0 | 18 | 603 | 0 | logfile |
✔ | 7Z1Z | 14453 | 2023-11-21 | 2022-02-25 | 3.5 | 2.62 | 3.61 | 1.8 | 0.002 | 0.51 | 0.0 | 0.04 | 15.15 | 0.00 | 2.224 | 7.50 | 0.00 | 2.4 | 97.6 | 0.0 | 0.26 | 0.64 | 0.65 | 1.09 | 1.7 | 0.003 | 0.78 | 0.0 | 0.05 | 18.27 | 0.00 | 1.546 | 14.15 | 0.34 | 3.8 | 96.2 | 0.0 | 0.01 | 0.75 | 0.68 | 0.68 | 1.65 | 35605 | 4031 | 36 | 140 | 12 | 0 | 0 | logfile |
✔ | 7VD9 | 31911 | 2023-11-16 | 2021-09-06 | 2.29 | 1.75 | 2.28 | 1.8 | 0.002 | 0.54 | 0.0 | 0.04 | 17.25 | 0.00 | 2.194 | 7.80 | 2.33 | 3.8 | 96.2 | 0.0 | 0.41 | 0.58 | 0.72 | 3.68 | 1.8 | 0.003 | 0.57 | 0.0 | 0.04 | 17.52 | 0.01 | 2.206 | 7.90 | 2.62 | 3.9 | 96.1 | 0.0 | 0.00 | 0.30 | 0.58 | 0.73 | 3.61 | 16426 | 1991 | 8 | 0 | 8 | 0 | 0 | logfile |
✘ | 7UFM | 26477 | 2023-11-22 | 2022-03-22 | 3.9 | 2.97 | 4.04 | 1.8 | 0.009 | 1.77 | 14.0 | 0.08 | 22.53 | 0.01 | 1.075 | 9.26 | 24.41 | 11.0 | 89.0 | 0.0 | -4.66 | 0.68 | 0.65 | 0.50 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 36392 | 4354 | 30 | 72 | 14 | 0 | 0 | logfile |
✔ | 7XW9 | 33494 | 2023-11-14 | 2022-05-26 | 2.7 | 2.10 | 2.82 | 1.8 | 0.012 | 0.69 | 0.0 | 0.05 | 12.26 | 0.01 | 2.167 | 6.26 | 0.00 | 3.5 | 96.5 | 0.0 | 0.37 | 0.78 | 0.77 | 3.77 | 1.8 | 0.004 | 0.62 | 0.0 | 0.05 | 15.35 | 0.00 | 2.160 | 7.37 | 2.14 | 3.6 | 96.4 | 0.0 | 0.95 | 0.36 | 0.80 | 0.80 | 3.56 | 8988 | 1143 | 6 | 0 | 1 | 0 | 0 | logfile |
✔ | 7C7S | 30301 | 2023-11-15 | 2020-05-26 | 2.9 | 2.38 | — | 1.8 | 0.006 | 0.78 | 0.0 | 0.14 | 13.57 | 0.01 | 2.153 | 7.86 | 0.00 | 3.7 | 96.3 | 0.0 | -2.62 | 0.83 | 0.80 | 2.82 | 1.8 | 0.003 | 0.72 | 0.0 | 0.04 | 15.76 | 0.00 | 2.169 | 9.50 | 3.22 | 4.0 | 96.0 | 0.0 | -0.15 | 0.59 | 0.84 | 0.83 | 2.54 | 10915 | 1355 | 4 | 0 | 9 | 0 | 0 | logfile |
✔ | 8DWG | 27753 | 2023-11-14 | 2022-08-01 | 2.71 | 2.08 | 2.72 | 1.8 | 0.006 | 0.64 | 0.0 | 0.05 | 12.61 | 0.00 | 2.106 | 6.68 | 0.00 | 4.5 | 95.5 | 0.0 | -1.14 | 0.78 | 0.81 | 4.92 | 1.8 | 0.005 | 0.63 | 0.0 | 0.04 | 15.14 | 0.00 | 2.082 | 6.68 | 1.52 | 5.0 | 95.0 | 0.0 | 0.71 | 0.32 | 0.80 | 0.84 | 3.67 | 8350 | 1101 | 7 | 0 | 1 | 0 | 0 | logfile |
✔ | 8F86 | 28915 | 2023-11-16 | 2022-11-21 | 3.1 | 3.36 | 3.26 | 1.8 | 0.007 | 0.69 | 0.0 | 0.06 | 26.59 | 0.00 | 1.927 | 8.46 | 0.00 | 5.2 | 94.6 | 0.2 | 0.66 | 0.85 | 0.80 | 1.06 | 2.1 | 0.003 | 0.64 | 0.0 | 0.05 | 27.06 | 0.00 | 2.131 | 9.71 | 0.23 | 2.8 | 97.0 | 0.2 | 1.03 | 0.40 | 0.85 | 0.79 | 1.00 | 14400 | 1055 | 13 | 296 | 2 | 0 | 0 | logfile |
✔ | 8F8Q | 28933 | 2023-11-18 | 2022-11-22 | 2.79 | 2.16 | 2.84 | 1.8 | 0.004 | 0.69 | 0.0 | 0.05 | 14.38 | 0.01 | 2.072 | 3.55 | 3.93 | 3.1 | 96.9 | 0.0 | -0.96 | 0.80 | 0.83 | 3.55 | 1.8 | 0.008 | 0.75 | 0.0 | 0.05 | 17.09 | 0.01 | 1.807 | 8.18 | 3.00 | 4.4 | 95.6 | 0.0 | 0.11 | 0.38 | 0.80 | 0.84 | 3.34 | 22006 | 2778 | 14 | 0 | 12 | 0 | 0 | logfile |
✔ | 7M3G | 23654 | 2023-11-15 | 2021-03-18 | 2.5 | 2.29 | — | 1.8 | 0.014 | 0.96 | 0.0 | 0.06 | 17.07 | 0.01 | 2.281 | 2.21 | 0.93 | 3.0 | 97.0 | 0.0 | -2.02 | 0.84 | 0.85 | 3.70 | 1.8 | 0.003 | 0.59 | 0.0 | 0.04 | 17.55 | 0.00 | 2.171 | 4.46 | 2.43 | 3.7 | 96.3 | 0.0 | -0.23 | 0.33 | 0.85 | 0.87 | 3.51 | 13298 | 1627 | 11 | 0 | 41 | 0 | 0 | logfile |
✔ | 8P2S | 17373 | 2023-11-14 | 2023-05-16 | 2.4 | 2.06 | 2.43 | 1.8 | 0.003 | 0.54 | 0.0 | 0.04 | 12.82 | 0.00 | 2.120 | 8.76 | 3.01 | 4.7 | 95.2 | 0.1 | 0.29 | 0.79 | 0.75 | 4.06 | 1.8 | 0.004 | 0.64 | 0.0 | 0.04 | 16.38 | 0.00 | 2.090 | 13.16 | 1.17 | 5.8 | 94.1 | 0.2 | 0.46 | 0.52 | 0.80 | 0.79 | 3.73 | 9694 | 1201 | 4 | 0 | 6 | 0 | 0 | logfile |
✔ | 7WiG | 32529 | 2023-11-14 | 2022-01-03 | 2.7 | 2.14 | — | 1.8 | 0.006 | 0.75 | 0.0 | 0.05 | 13.13 | 0.01 | 2.192 | 6.75 | 0.00 | 2.0 | 98.0 | 0.0 | 1.11 | 0.78 | 0.77 | 3.19 | 1.8 | 0.002 | 0.90 | 0.0 | 0.04 | 15.48 | 0.00 | 2.195 | 5.51 | 1.13 | 2.0 | 98.0 | 0.0 | 1.42 | 0.33 | 0.79 | 0.80 | 2.94 | 8931 | 1139 | 6 | 0 | 1 | 0 | 0 | logfile |
✔ | 7S8P | 24900 | 2023-11-14 | 2021-09-18 | 2.6 | 2.11 | 2.62 | 1.8 | 0.005 | 0.75 | 0.0 | 0.05 | 12.81 | 0.00 | 2.183 | 3.18 | 0.00 | 5.8 | 94.2 | 0.0 | -2.01 | 0.73 | 0.75 | 4.73 | 1.8 | 0.004 | 0.67 | 0.0 | 0.04 | 15.58 | 0.00 | 2.121 | 3.18 | 2.61 | 5.4 | 94.6 | 0.0 | 0.13 | 0.36 | 0.84 | 0.84 | 3.71 | 8093 | 1089 | 5 | 0 | 1 | 0 | 0 | logfile |
✔ | 8Q9F | 18279 | 2023-11-13 | 2023-08-20 | 1.91 | 1.89 | 1.88 | 1.9 | 0.011 | 1.78 | 0.0 | 0.09 | 10.30 | 0.01 | 2.515 | 0.00 | 0.00 | 0.2 | 99.8 | 0.0 | -2.15 | 0.31 | 0.73 | 7.64 | 1.9 | 0.003 | 0.64 | 0.0 | 0.05 | 15.99 | 0.00 | 2.249 | 3.13 | 0.00 | 2.5 | 97.5 | 0.0 | -2.11 | 1.84 | 0.44 | 0.86 | 7.01 | 6390 | 414 | 6 | 0 | 0 | 0 | 3258 | logfile |
✔ | 7S8o | 24899 | 2023-11-14 | 2021-09-18 | 2.58 | 2.12 | 2.59 | 1.9 | 0.007 | 0.72 | 0.0 | 0.05 | 13.18 | 0.00 | 2.102 | 3.18 | 0.00 | 5.8 | 94.2 | 0.0 | 0.31 | 0.81 | 0.80 | 4.50 | 1.9 | 0.002 | 0.53 | 0.0 | 0.04 | 15.63 | 0.00 | 2.207 | 3.18 | 0.92 | 4.4 | 95.6 | 0.0 | 1.05 | 0.40 | 0.83 | 0.83 | 3.24 | 8331 | 1101 | 6 | 0 | 1 | 0 | 0 | logfile |
✔ | 7UWM | 26836 | 2023-11-14 | 2022-05-03 | 2.5 | 2.14 | 2.51 | 1.9 | 0.004 | 0.59 | 0.0 | 0.04 | 18.27 | 0.00 | 2.107 | 6.68 | 2.96 | 3.0 | 97.0 | 0.0 | -0.69 | 0.80 | 0.79 | 2.42 | 1.9 | 0.003 | 0.57 | 0.0 | 0.04 | 18.46 | 0.00 | 2.122 | 7.90 | 4.39 | 3.5 | 96.5 | 0.0 | -0.58 | 0.24 | 0.80 | 0.79 | 2.46 | 7972 | 967 | 9 | 0 | 9 | 0 | 0 | logfile |
✔ | 8F8S | 28935 | 2023-11-17 | 2022-11-22 | 2.84 | 2.18 | 2.89 | 1.9 | 0.004 | 0.61 | 0.0 | 0.05 | 14.04 | 0.00 | 2.002 | 4.56 | 2.94 | 3.2 | 96.8 | 0.0 | -0.35 | 0.80 | 0.84 | 3.68 | 1.9 | 0.003 | 0.66 | 0.0 | 0.05 | 17.12 | 0.00 | 1.972 | 7.88 | 1.88 | 3.5 | 96.5 | 0.0 | 0.36 | 0.36 | 0.79 | 0.84 | 3.18 | 20371 | 2579 | 14 | 0 | 14 | 0 | 0 | logfile |
✔ | 8HKM | 34855 | 2023-11-20 | 2022-11-27 | 2.95 | 2.42 | 3.07 | 1.9 | 0.003 | 0.71 | 3.0 | 0.05 | 15.55 | 0.01 | 1.484 | 10.49 | 1.30 | 2.6 | 97.3 | 0.1 | -0.56 | 0.80 | 0.84 | 3.13 | 1.8 | 0.004 | 0.64 | 0.0 | 0.04 | 16.35 | 0.00 | 2.164 | 9.81 | 2.34 | 2.9 | 97.0 | 0.1 | 0.53 | 1.16 | 0.79 | 0.83 | 2.93 | 28855 | 3596 | 8 | 0 | 19 | 0 | 0 | logfile |