Table showing results for October 2021

The table shows a selection of parameters. Activate more columns using the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model

Resolution

• Resolution
• D₉₉
• D_FSC
• D_Model
• D_Model refined

Map vs model

• CC_box
• CC_mask
• EMRinger
• CC_box refined
• CC_mask refined
• EMRinger refined

Geometry

• Bond rmsd
• Angle rmsd
• Cβ devts
• Chirality
• Dihedral rmsd
• Plane rmsd
• Min nonbonded
• Clashscore
• Rota outliers
• Bond rmsd refined
• Angle rmsd refined
• Cβ devts refined
• Chirality refined
• Dihedral rmsd refined
• Plane rmsd refined
• Min nonbonded refined
• Clashscore refined
• Rota outliers refined
• RMSD

Ramachandran

• Rama allowed
• Rama favored
• Rama outliers
• Z-score
• Rama allowed refined
• Rama favored refined
• Rama outliers refined
• Z-score refined

Composition

• # atoms
• # residues
• # chains
• # nucleotides
• # other
• # water
• # H

Other

• Date processed
• Release Date

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Status	PDB code	EMDB code	Date processed	Release Date	Resolution	D99	DFSC	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	CCbox	CCmask	EMRinger	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	RMSD	CCbox	CCmask	EMRinger	# atoms	# residues	# chains	# nucleotides	# other	# water	# H	Logfile
✔	6WWG	21934	2021-10-04	2020-05-09	2.9	2.24	2.91	2.1	0.012	0.90	0.0	0.07	14.85	0.02	1.969	6.48	2.58	4.7	95.1	0.3	-3.52	0.66	0.80	4.17	2.1	0.006	0.76	0.0	0.05	17.40	0.00	1.882	9.34	2.82	4.0	96.0	0.0	-0.53	0.69	0.69	0.85	3.63	19749	2479	12	2	10	0	0	logfile
✔	6XZ7	10655	2021-10-07	2020-02-03	2.1	2.05	2.12	2.1	0.010	0.81	1.0	0.08	14.52	0.03	1.564	6.25	3.26	2.8	96.8	0.4	-2.20	0.41	0.69	5.50	2.1	0.006	0.86	0.0	0.05	14.67	0.01	1.362	5.32	2.48	2.3	97.5	0.1	0.31	0.94	0.71	0.90	5.22	94915	3351	45	3169	179	528	0	logfile
✔	7LUC	23520	2021-10-06	2021-02-22	3.21	2.30	3.37	2.1	0.004	0.73	0.0	0.05	15.76	0.01	1.937	16.02	3.51	3.5	96.5	0.0	-1.82	0.66	0.61	1.85	2.0	0.009	0.79	0.0	0.05	16.85	0.00	2.008	16.37	0.66	5.6	94.4	0.0	-0.31	0.55	0.70	0.69	1.52	21288	2754	15	0	0	0	0	logfile
✔	6WWQ	21944	2021-10-03	2020-05-09	3.0	2.27	3.08	2.1	0.014	0.95	0.0	0.07	14.86	0.01	1.980	5.15	0.19	5.9	94.1	0.0	-4.19	0.58	0.78	3.97	3.0	0.005	0.74	0.0	0.05	17.67	0.01	1.975	8.41	2.21	3.8	96.2	0.0	-0.63	0.73	0.60	0.83	3.65	9673	1215	6	1	4	0	0	logfile
✔	6WWV	21949	2021-10-03	2020-05-09	3.1	2.37	3.04	2.1	0.013	0.97	1.0	0.07	14.76	0.01	1.934	5.67	0.67	6.0	93.5	0.6	-4.33	0.57	0.78	4.01	3.0	0.004	0.70	0.0	0.05	17.04	0.00	1.971	8.99	0.58	4.8	95.0	0.2	-0.73	1.71	0.59	0.82	3.39	9676	1215	6	1	4	0	0	logfile
✔	6X19	21993	2021-10-03	2020-05-18	2.1	2.20	2.11	2.1	0.009	1.31	6.0	0.08	14.25	0.01	2.134	12.47	1.01	2.7	97.3	0.1	-1.61	0.73	0.84	4.93	2.2	0.006	1.03	0.0	0.04	16.64	0.00	2.132	7.48	0.83	2.0	98.0	0.0	1.04	1.01	0.72	0.88	4.54	10277	1258	9	0	1	136	0	logfile
✔	6ZJA	11233	2021-10-06	2020-06-28	2.0	2.10	2.09	2.1	0.005	0.86	0.0	0.06	14.30	0.01	1.974	0.60	1.37	4.1	95.9	0.0	-0.40	0.79	0.87	6.97	2.1	0.003	0.63	0.0	0.05	16.04	0.00	1.738	1.33	0.58	4.2	95.8	0.0	0.25	0.39	0.77	0.88	6.69	77951	9684	60	0	36	3191	0	logfile
✔	6WX6	21951	2021-10-05	2020-05-09	2.0	2.10	2.08	2.1	0.006	0.69	0.0	0.04	14.94	0.00	2.277	0.00	0.00	1.2	98.8	0.0	1.60	0.77	0.88	7.70	2.1	0.003	0.52	0.0	0.03	16.24	0.00	2.012	2.81	0.69	1.2	98.8	0.0	4.76	0.53	0.78	0.89	7.38	68332	4128	56	0	8	2420	32664	logfile
✔	7M30	23640	2021-10-03	2021-03-17	3.81	2.76	3.80	2.1	0.005	1.15	0.0	0.07	13.59	0.01	1.711	8.91	0.89	5.3	94.7	0.0	-0.94	0.68	0.56	1.80	2.2	0.008	1.17	0.0	0.05	17.39	0.01	2.075	24.25	0.69	6.9	93.1	0.0	-0.60	3.54	0.75	0.72	0.87	9191	1167	12	0	2	0	0	logfile
✔	7oUH	13077	2021-10-04	2021-06-11	3.5	2.47	3.44	2.1	0.013	0.74	0.0	0.04	17.34	0.01	1.666	7.40	0.00	1.6	98.4	0.0	0.40	0.76	0.71	2.22	2.0	0.003	0.77	0.0	0.04	19.92	0.01	1.998	14.19	0.82	2.4	97.6	0.0	-0.24	0.74	0.75	0.75	2.24	15088	1664	18	80	10	6	0	logfile
✔	7L1R	23116	2021-10-05	2020-12-15	3.1	2.19	—	2.1	0.011	1.76	28.0	0.11	14.03	0.01	1.965	3.89	3.32	3.3	96.7	0.0	-0.59	0.65	0.71	2.77	2.0	0.004	0.73	0.0	0.05	18.00	0.01	1.880	9.76	1.21	3.6	96.4	0.0	0.01	1.15	0.77	0.79	2.63	24199	3118	13	0	12	0	0	logfile
✘	7MTR	23995	2021-10-03	2021-05-13	3.3	2.40	—	2.1	0.007	0.97	1.0	0.05	14.03	0.01	2.236	7.57	1.03	3.9	96.1	0.0	-0.20	0.78	0.74	2.62	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	10967	1524	4	0	3	0	0	logfile
✔	6SAG	10130	2021-10-03	2019-07-16	2.0	2.11	2.01	2.1	0.004	0.65	0.0	0.04	12.99	0.00	0.351	2.79	0.00	2.6	97.4	0.0	-0.33	0.58	0.86	6.64	2.1	0.005	0.69	0.0	0.04	15.26	0.01	2.016	3.20	1.24	2.8	97.2	0.0	1.28	0.73	0.59	0.88	6.95	54080	6120	240	120	240	2840	0	logfile
✔	6XEY	22156	2021-10-05	2020-06-14	3.25	3.61	3.07	2.1	0.005	0.81	1.0	0.05	12.58	0.01	2.265	3.59	0.26	5.1	94.8	0.1	-1.87	0.88	0.83	3.34	2.1	0.003	0.56	0.0	0.04	13.58	0.00	2.130	6.60	0.15	4.7	95.3	0.0	-0.40	0.35	0.89	0.85	2.37	28482	3788	24	0	63	0	0	logfile
✔	7JJP	22358	2021-10-07	2020-07-27	1.94	2.15	2.08	2.1	0.012	1.19	0.0	0.07	14.61	0.01	2.228	2.51	0.56	1.6	98.4	0.0	0.39	0.71	0.85	5.30	2.1	0.004	0.56	0.0	0.04	15.43	0.00	2.083	7.16	0.70	1.9	98.1	0.0	3.39	0.94	0.72	0.87	4.87	40920	2352	36	0	180	396	19104	logfile
✔	7B18	11981	2021-10-06	2020-11-24	2.62	2.27	2.75	2.1	0.007	0.84	0.0	0.06	12.74	0.01	2.028	12.91	0.40	4.1	95.8	0.1	-0.36	0.72	0.71	3.05	2.0	0.011	0.91	1.0	0.05	15.95	0.01	1.842	14.06	2.10	4.8	95.2	0.0	-0.27	0.49	0.73	0.73	2.51	30105	3814	13	0	44	0	0	logfile
✔	7LJC	23390	2021-10-03	2021-01-28	3.0	2.23	—	2.1	0.022	1.12	0.0	0.52	9.06	0.01	2.282	5.07	0.11	2.8	97.2	0.0	-1.06	0.78	0.81	3.11	2.0	0.003	1.11	0.0	0.16	15.05	0.01	2.115	16.40	2.68	2.6	97.4	0.0	0.52	1.25	0.76	0.78	3.01	8544	1040	6	0	14	0	0	logfile
✔	6WWT	21947	2021-10-03	2020-05-09	3.2	2.29	3.15	2.1	0.013	1.27	1.0	0.07	15.22	0.01	2.106	6.00	1.72	6.8	92.9	0.3	-4.07	0.54	0.73	3.01	2.1	0.012	1.20	1.0	0.05	17.69	0.00	1.845	10.78	0.29	4.2	95.8	0.0	-0.47	1.30	0.57	0.78	2.43	9657	1215	5	1	3	0	0	logfile
✘	7JSX	22462	2021-10-07	2020-08-16	2.06	2.05	—	2.1	0.022	1.67	2.0	0.11	11.97	0.01	2.201	6.73	1.26	3.9	96.1	0.0	-1.03	0.74	0.76	5.10	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	38813	4832	40	0	0	1141	0	logfile
✘	7MKL	23898	2021-10-05	2021-04-24	3.2	2.50	—	2.1	0.004	0.82	0.0	0.06	12.45	0.01	2.162	10.10	0.00	2.9	97.1	0.0	0.35	0.64	0.58	0.96	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	25597	3164	23	0	63	0	0	logfile

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