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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7UM6 | 26598 | 2022-12-11 | 2022-04-06 | 2.79 | 2.13 | 2.81 | 1.9 | 0.021 | 0.64 | 0.0 | 0.04 | 11.12 | 0.00 | 2.359 | 2.51 | 0.12 | 3.8 | 96.2 | 0.0 | -0.54 | 0.82 | 0.81 | 4.30 | 1.9 | 0.003 | 0.64 | 0.0 | 0.04 | 13.68 | 0.00 | 2.268 | 4.26 | 1.45 | 3.3 | 96.7 | 0.0 | 0.24 | 0.29 | 0.83 | 0.83 | 4.05 | 8175 | 1094 | 6 | 0 | 1 | 0 | 0 | logfile |
✔ | 7UM7 | 26599 | 2022-12-11 | 2022-04-06 | 2.75 | 2.13 | 2.74 | 1.9 | 0.002 | 0.48 | 0.0 | 0.04 | 12.58 | 0.01 | 2.220 | 2.88 | 0.00 | 2.8 | 97.2 | 0.0 | -0.25 | 0.81 | 0.80 | 4.23 | 1.9 | 0.003 | 0.56 | 0.0 | 0.04 | 14.97 | 0.00 | 2.239 | 3.70 | 1.20 | 4.0 | 96.0 | 0.0 | 0.72 | 0.32 | 0.83 | 0.82 | 3.83 | 8165 | 1089 | 6 | 0 | 1 | 0 | 0 | logfile |
✔ | 7UM5 | 26597 | 2022-12-12 | 2022-04-06 | 2.73 | 2.12 | 2.75 | 1.9 | 0.003 | 0.56 | 0.0 | 0.04 | 11.81 | 0.00 | 2.281 | 2.35 | 0.00 | 3.8 | 96.2 | 0.0 | -0.74 | 0.82 | 0.82 | 4.55 | 1.9 | 0.003 | 0.61 | 0.0 | 0.04 | 14.32 | 0.00 | 2.253 | 4.15 | 0.83 | 4.1 | 95.9 | 0.0 | 0.32 | 0.35 | 0.83 | 0.83 | 3.96 | 8277 | 1104 | 6 | 0 | 1 | 1 | 0 | logfile |
✘ | 7D1T | 30547 | 2022-12-19 | 2020-09-15 | 1.95 | 1.88 | 1.89 | 1.9 | 0.020 | 1.91 | 31.0 | 0.10 | 18.53 | 0.02 | 1.200 | 3.45 | 2.40 | 1.9 | 97.9 | 0.2 | -0.93 | 0.77 | 0.85 | 6.98 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 52994 | 5312 | 108 | 0 | 196 | 2432 | 0 | logfile |
✔ | 6ZGL | 11210 | 2022-12-13 | 2020-06-19 | 1.9 | 1.87 | — | 1.9 | 0.013 | 1.55 | 0.0 | 0.12 | 15.52 | 0.01 | 2.196 | 9.41 | 3.73 | 1.1 | 98.9 | 0.0 | 0.13 | 0.73 | 0.83 | 7.03 | 1.9 | 0.003 | 0.56 | 0.0 | 0.04 | 15.75 | 0.00 | 2.118 | 4.99 | 1.00 | 0.6 | 99.4 | 0.0 | 3.59 | 0.75 | 0.75 | 0.83 | 7.07 | 15760 | 1848 | 24 | 0 | 0 | 964 | 0 | logfile |
✔ | 7TDF | 25827 | 2022-12-15 | 2021-12-31 | 2.7 | 2.10 | 2.66 | 1.9 | 0.006 | 0.74 | 0.0 | 0.05 | 12.56 | 0.01 | 2.148 | 2.81 | 0.19 | 3.5 | 96.5 | 0.0 | 0.06 | 0.74 | 0.77 | 4.39 | 1.9 | 0.004 | 0.59 | 0.0 | 0.04 | 15.36 | 0.01 | 2.041 | 5.47 | 1.13 | 2.7 | 97.3 | 0.0 | 2.19 | 1.13 | 0.76 | 0.81 | 3.71 | 19566 | 1188 | 2 | 0 | 0 | 0 | 9792 | logfile |
✔ | 7NJ1 | 12369 | 2022-12-12 | 2021-02-14 | 2.9 | 2.23 | — | 1.9 | 0.005 | 0.70 | 1.0 | 0.05 | 13.54 | 0.00 | 2.211 | 9.26 | 1.09 | 7.4 | 92.4 | 0.2 | -2.39 | 0.75 | 0.73 | 2.14 | 1.9 | 0.004 | 0.76 | 0.0 | 0.04 | 16.56 | 0.00 | 2.141 | 11.50 | 2.54 | 6.2 | 93.7 | 0.1 | 0.67 | 0.57 | 0.76 | 0.76 | 1.80 | 11096 | 1501 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 7KoD | 22972 | 2022-12-13 | 2020-11-08 | 1.655 | 2.30 | — | 1.9 | 0.001 | 0.33 | 0.0 | 0.03 | 8.49 | 0.00 | 2.288 | 0.80 | 0.00 | 1.1 | 98.9 | 0.0 | 6.14 | 0.91 | 0.91 | 8.16 | 2.0 | 0.005 | 0.51 | 0.0 | 0.04 | 13.89 | 0.00 | 1.846 | 2.78 | 0.11 | 0.8 | 99.2 | 0.0 | 5.13 | 0.58 | 0.87 | 0.93 | 8.03 | 68186 | 4128 | 48 | 0 | 0 | 1727 | 32643 | logfile |
✔ | 7VUH | 32128 | 2022-12-12 | 2021-11-02 | 3.22 | 2.19 | — | 1.9 | 0.004 | 0.66 | 0.0 | 0.04 | 13.59 | 0.00 | 2.099 | 14.40 | 0.00 | 6.2 | 93.8 | 0.0 | -1.87 | 0.71 | 0.69 | 2.81 | 1.9 | 0.003 | 0.65 | 0.0 | 0.04 | 15.91 | 0.00 | 2.030 | 14.58 | 0.33 | 6.0 | 94.0 | 0.0 | -1.30 | 0.38 | 0.72 | 0.73 | 2.43 | 8302 | 1042 | 5 | 0 | 1 | 0 | 0 | logfile |
✔ | 6WWU | 21948 | 2022-12-12 | 2020-05-09 | 2.7 | 2.08 | 2.76 | 1.9 | 0.011 | 1.26 | 1.0 | 0.06 | 16.22 | 0.02 | 2.072 | 6.98 | 2.78 | 5.8 | 94.0 | 0.2 | -3.98 | 0.60 | 0.76 | 4.02 | 1.9 | 0.003 | 0.63 | 0.0 | 0.04 | 17.74 | 0.00 | 1.999 | 7.14 | 1.92 | 3.2 | 96.7 | 0.1 | -0.34 | 0.69 | 0.61 | 0.83 | 3.91 | 9688 | 1216 | 6 | 1 | 4 | 0 | 0 | logfile |
✔ | 7RCV | 24407 | 2022-12-11 | 2021-07-08 | 2.01 | 1.78 | — | 1.9 | 0.024 | 2.35 | 0.0 | 0.13 | 20.29 | 0.01 | 1.915 | 14.12 | 1.99 | 2.6 | 97.4 | 0.0 | 0.92 | 0.78 | 0.79 | 5.10 | 1.9 | 0.006 | 0.91 | 0.0 | 0.05 | 19.05 | 0.01 | 2.010 | 12.97 | 2.06 | 2.8 | 97.1 | 0.0 | 0.50 | 0.91 | 0.81 | 0.84 | 5.43 | 54656 | 5544 | 114 | 0 | 228 | 1236 | 0 | logfile |
✔ | 7E9H | 31032 | 2022-12-13 | 2021-03-04 | 4.0 | 2.62 | — | 1.9 | 0.003 | 0.48 | 0.0 | 0.04 | 11.36 | 0.00 | 2.202 | 8.13 | 0.06 | 2.9 | 97.1 | 0.0 | -2.83 | 0.68 | 0.61 | — | 1.9 | 0.003 | 0.72 | 0.0 | 0.04 | 15.04 | 0.00 | 2.138 | 15.92 | 0.48 | 4.8 | 95.2 | 0.0 | -0.99 | 1.97 | 0.71 | 0.66 | — | 16847 | 2309 | 8 | 0 | 0 | 0 | 0 | logfile |
✔ | 7M3N | 23658 | 2022-12-11 | 2021-03-18 | 2.4 | 2.15 | 2.40 | 1.9 | 0.005 | 0.63 | 0.0 | 0.04 | 15.95 | 0.00 | 2.168 | 5.79 | 4.28 | 4.3 | 95.6 | 0.1 | -2.53 | 0.43 | 0.82 | 4.98 | 2.0 | 0.003 | 0.58 | 0.0 | 0.04 | 16.91 | 0.00 | 2.261 | 6.89 | 2.29 | 3.6 | 96.4 | 0.0 | -0.41 | 0.46 | 0.45 | 0.84 | 4.72 | 6004 | 759 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 6WWR | 21945 | 2022-12-12 | 2020-05-09 | 2.7 | 2.08 | 2.69 | 1.9 | 0.009 | 0.96 | 1.0 | 0.06 | 14.63 | 0.01 | 1.967 | 5.49 | 0.57 | 5.8 | 94.2 | 0.0 | -3.62 | 0.60 | 0.77 | 5.00 | 2.0 | 0.005 | 0.69 | 0.0 | 0.05 | 16.98 | 0.00 | 1.893 | 7.17 | 2.01 | 4.3 | 95.7 | 0.0 | -0.46 | 1.08 | 0.62 | 0.84 | 3.96 | 9719 | 1220 | 6 | 1 | 4 | 0 | 0 | logfile |
✔ | 7N1U | 24123 | 2022-12-15 | 2021-05-28 | 3.14 | 2.62 | — | 1.9 | 0.013 | 1.75 | 7.0 | 0.13 | 14.19 | 0.01 | 2.003 | 6.76 | 1.56 | 6.1 | 93.7 | 0.3 | -1.65 | 0.83 | 0.80 | 3.13 | 2.1 | 0.005 | 0.76 | 0.0 | 0.05 | 15.77 | 0.00 | 2.094 | 12.43 | 0.71 | 4.6 | 95.4 | 0.0 | -0.16 | 0.65 | 0.84 | 0.83 | 2.43 | 26619 | 3225 | 39 | 0 | 99 | 0 | 0 | logfile |
✔ | 7N8o | 24239 | 2022-12-11 | 2021-06-15 | 1.93 | 1.73 | — | 1.9 | 0.024 | 2.36 | 0.0 | 0.13 | 20.20 | 0.01 | 1.522 | 14.96 | 1.91 | 3.0 | 96.9 | 0.1 | 0.75 | 0.73 | 0.75 | 5.48 | 1.8 | 0.004 | 0.76 | 0.0 | 0.05 | 18.62 | 0.01 | 2.011 | 12.03 | 1.57 | 2.8 | 97.2 | 0.0 | 1.10 | 0.35 | 0.75 | 0.77 | 5.40 | 54656 | 5544 | 113 | 0 | 228 | 1236 | 0 | logfile |
✔ | 6TAX | 10429 | 2022-12-19 | 2019-10-31 | 3.2 | 2.63 | — | 1.9 | 0.009 | 1.13 | 0.0 | 0.06 | 11.18 | 0.01 | 2.065 | 5.52 | 0.46 | 9.5 | 90.3 | 0.2 | -4.10 | 0.88 | 0.80 | 3.18 | 1.9 | 0.002 | 0.67 | 0.0 | 0.04 | 13.73 | 0.00 | 2.032 | 10.32 | 0.23 | 8.0 | 92.0 | 0.0 | -0.17 | 1.60 | 0.88 | 0.81 | 2.02 | 35235 | 4349 | 1 | 0 | 71 | 0 | 0 | logfile |
✔ | 7UWM | 26836 | 2022-12-11 | 2022-05-03 | 2.5 | 2.14 | 2.51 | 1.9 | 0.003 | 0.57 | 0.0 | 0.04 | 18.13 | 0.00 | 2.107 | 6.93 | 2.96 | 3.0 | 97.0 | 0.0 | -0.69 | 0.80 | 0.79 | 2.42 | 1.9 | 0.002 | 0.53 | 0.0 | 0.04 | 18.42 | 0.00 | 2.115 | 7.00 | 4.39 | 2.6 | 97.4 | 0.0 | -0.32 | 0.23 | 0.80 | 0.79 | 2.06 | 7972 | 967 | 9 | 0 | 9 | 0 | 0 | logfile |
✔ | 7TQY | 26075 | 2022-12-12 | 2022-01-27 | 2.6 | 2.10 | 2.62 | 1.9 | 0.005 | 0.85 | 0.0 | 0.05 | 16.19 | 0.01 | 1.947 | 3.28 | 1.12 | 3.3 | 96.7 | 0.0 | 0.37 | 0.62 | 0.83 | 3.67 | 1.9 | 0.004 | 0.61 | 0.0 | 0.04 | 16.74 | 0.00 | 1.922 | 6.76 | 2.33 | 3.7 | 96.3 | 0.0 | 0.82 | 0.41 | 0.61 | 0.83 | 3.74 | 9890 | 1235 | 6 | 1 | 6 | 0 | 0 | logfile |
✔ | 7P6A | 13223 | 2022-12-11 | 2021-07-15 | 1.9 | 1.91 | 1.88 | 1.9 | 0.004 | 0.72 | 0.0 | 0.06 | 12.30 | 0.01 | 2.247 | 3.33 | 0.00 | 3.8 | 96.2 | 0.0 | -3.07 | 0.51 | 0.86 | 7.13 | 1.9 | 0.003 | 0.65 | 0.0 | 0.05 | 14.09 | 0.00 | 2.291 | 4.28 | 0.00 | 4.7 | 95.3 | 0.0 | -2.61 | 0.82 | 0.55 | 0.89 | 7.80 | 4166 | 540 | 10 | 0 | 0 | 76 | 0 | logfile |