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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7K00 | 22586 | 2022-04-13 | 2020-09-02 | 1.98 | 1.72 | — | 1.9 | 0.007 | 0.97 | 3.0 | 0.05 | 15.24 | 0.02 | 1.588 | 7.39 | 6.32 | 3.9 | 96.0 | 0.1 | -1.76 | 0.69 | 0.83 | 5.00 | 1.8 | 0.005 | 0.76 | 0.0 | 0.04 | 15.22 | 0.01 | 1.797 | 7.93 | 2.97 | 3.7 | 96.2 | 0.0 | 0.22 | 0.86 | 0.70 | 0.86 | 4.93 | 149338 | 5585 | 117 | 4555 | 331 | 7248 | 0 | logfile |
✔ | 7KoD | 22972 | 2022-04-06 | 2020-11-08 | 1.655 | 2.30 | — | 1.9 | 0.001 | 0.33 | 0.0 | 0.03 | 8.49 | 0.00 | 2.288 | 0.80 | 0.00 | 1.1 | 98.9 | 0.0 | 6.14 | 0.91 | 0.91 | 8.16 | 2.0 | 0.005 | 0.49 | 0.0 | 0.04 | 13.81 | 0.00 | 1.858 | 2.53 | 0.27 | 0.6 | 99.4 | 0.0 | 5.26 | 0.58 | 0.88 | 0.94 | 8.02 | 68186 | 4128 | 48 | 0 | 0 | 1727 | 32643 | logfile |
✘ | 7EFD | 31084 | 2022-04-06 | 2021-03-21 | 1.77 | 1.79 | 1.83 | 1.9 | 0.033 | 3.16 | 60.0 | 0.09 | 15.47 | 0.02 | 0.000 | 2.38 | 2.15 | 1.7 | 97.5 | 0.8 | -0.54 | 0.71 | 0.78 | 5.66 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 20020 | 2400 | 20 | 0 | 20 | 780 | 0 | logfile |
✔ | 7SQG | 25384 | 2022-04-04 | 2021-11-05 | 2.6 | 2.14 | — | 1.9 | 0.004 | 0.56 | 0.0 | 0.05 | 14.80 | 0.00 | 2.423 | 3.35 | 0.00 | 3.0 | 97.0 | 0.0 | 1.39 | 0.75 | 0.77 | 3.39 | 1.8 | 0.006 | 0.67 | 0.0 | 0.05 | 18.89 | 0.01 | 2.071 | 8.16 | 1.88 | 4.2 | 95.8 | 0.0 | 1.28 | 0.97 | 0.81 | 0.82 | 3.52 | 6630 | 810 | 6 | 0 | 12 | 0 | 0 | logfile |
✘ | 7EFC | 31083 | 2022-04-06 | 2021-03-21 | 1.7 | 1.76 | 1.83 | 1.9 | 0.032 | 3.16 | 80.0 | 0.09 | 15.03 | 0.02 | 0.000 | 3.39 | 2.15 | 2.5 | 96.6 | 0.8 | -0.84 | 0.73 | 0.80 | 6.33 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 20020 | 2400 | 20 | 0 | 20 | 780 | 0 | logfile |
✔ | 6WWo | 21942 | 2022-04-04 | 2020-05-09 | 2.8 | 2.07 | 2.79 | 1.9 | 0.011 | 1.28 | 3.0 | 0.06 | 15.86 | 0.02 | 1.958 | 5.97 | 1.99 | 6.1 | 93.5 | 0.3 | -4.55 | 0.58 | 0.74 | 4.64 | 2.0 | 0.004 | 0.69 | 0.0 | 0.04 | 17.72 | 0.00 | 1.941 | 7.74 | 2.75 | 3.7 | 96.2 | 0.1 | -0.57 | 2.43 | 0.60 | 0.81 | 3.89 | 9784 | 1230 | 6 | 1 | 5 | 0 | 0 | logfile |
✔ | 7WPE | 32684 | 2022-04-08 | 2022-01-23 | 2.69 | 2.24 | — | 1.9 | 0.003 | 0.58 | 3.0 | 0.08 | 13.18 | 0.00 | 1.889 | 4.58 | 0.12 | 3.2 | 96.8 | 0.0 | 0.32 | 0.73 | 0.76 | 3.30 | 2.1 | 0.007 | 0.68 | 0.0 | 0.05 | 14.99 | 0.01 | 2.048 | 7.36 | 1.98 | 4.2 | 95.8 | 0.0 | -0.02 | 0.94 | 0.75 | 0.79 | 3.00 | 32038 | 4187 | 14 | 0 | 40 | 0 | 0 | logfile |
✔ | 7S8M | 24897 | 2022-04-04 | 2021-09-18 | 2.54 | 2.13 | 2.54 | 2.0 | 0.004 | 0.59 | 0.0 | 0.04 | 12.64 | 0.00 | 2.171 | 6.45 | 0.00 | 4.1 | 95.9 | 0.0 | 0.46 | 0.79 | 0.80 | 4.13 | 2.0 | 0.003 | 0.56 | 0.0 | 0.04 | 15.00 | 0.00 | 2.213 | 6.39 | 1.95 | 4.2 | 95.8 | 0.0 | 1.25 | 0.33 | 0.81 | 0.82 | 3.88 | 8346 | 1102 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 7VXE | 32177 | 2022-04-09 | 2021-11-12 | 3.2 | 2.31 | — | 2.0 | 0.003 | 0.45 | 0.0 | 0.04 | 7.36 | 0.00 | 2.082 | 1.83 | 0.00 | 4.4 | 95.5 | 0.1 | -1.79 | 0.61 | 0.54 | 2.41 | 2.1 | 0.003 | 0.58 | 0.0 | 0.04 | 12.72 | 0.00 | 1.935 | 4.93 | 0.22 | 3.3 | 96.6 | 0.2 | -0.03 | 1.46 | 0.70 | 0.72 | 2.67 | 49296 | 3186 | 3 | 0 | 0 | 0 | 24366 | logfile |
✔ | 7KBB | 22788 | 2022-04-04 | 2020-10-01 | 4.02 | 2.37 | 4.07 | 2.0 | 0.006 | 1.16 | 0.0 | 0.06 | 14.88 | 0.01 | 2.073 | 14.81 | 1.58 | 5.4 | 94.1 | 0.5 | -1.59 | 0.57 | 0.58 | — | 1.6 | 0.008 | 1.17 | 0.0 | 0.05 | 14.56 | 0.01 | 2.104 | 15.92 | 0.00 | 6.4 | 93.6 | 0.0 | -0.45 | 1.23 | 0.59 | 0.59 | — | 6422 | 812 | 7 | 0 | 0 | 0 | 0 | logfile |
✔ | 7N5F | 24188 | 2022-04-04 | 2021-06-05 | 2.7 | 2.27 | 2.74 | 2.0 | 0.023 | 1.50 | 0.0 | 0.10 | 9.99 | 0.01 | 2.468 | 0.16 | 0.00 | 1.3 | 98.7 | 0.0 | 1.68 | 0.36 | 0.75 | 3.32 | 1.7 | 0.003 | 0.56 | 0.0 | 0.04 | 17.43 | 0.00 | 2.324 | 7.74 | 0.95 | 1.3 | 98.7 | 0.0 | 2.60 | 0.79 | 0.35 | 0.77 | 3.26 | 3037 | 386 | 1 | 0 | 1 | 0 | 0 | logfile |
✔ | 7EZM | 31389 | 2022-04-04 | 2021-06-01 | 2.9 | 2.20 | — | 2.0 | 0.011 | 1.07 | 1.0 | 0.15 | 13.21 | 0.01 | 2.228 | 4.72 | 0.94 | 3.8 | 96.2 | 0.0 | -0.87 | 0.76 | 0.76 | 3.60 | 2.0 | 0.004 | 0.78 | 0.0 | 0.07 | 16.17 | 0.00 | 2.095 | 11.18 | 2.51 | 2.1 | 97.9 | 0.0 | 0.54 | 0.63 | 0.78 | 0.80 | 2.94 | 9008 | 1171 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 7N1V | 24124 | 2022-04-07 | 2021-05-28 | 3.21 | 2.67 | — | 2.0 | 0.013 | 1.76 | 10.0 | 0.13 | 13.78 | 0.01 | 1.776 | 4.31 | 0.98 | 6.5 | 93.2 | 0.3 | -1.63 | 0.82 | 0.80 | 3.43 | 2.1 | 0.006 | 0.78 | 0.0 | 0.05 | 15.96 | 0.01 | 2.098 | 10.66 | 0.28 | 4.2 | 95.8 | 0.0 | -0.34 | 1.32 | 0.84 | 0.83 | 2.81 | 26947 | 3274 | 35 | 0 | 95 | 0 | 0 | logfile |
✔ | 7NA7 | 24267 | 2022-04-04 | 2021-06-20 | 2.7 | 2.07 | — | 2.0 | 0.006 | 1.03 | 5.0 | 0.22 | 13.26 | 0.01 | 2.178 | 7.05 | 0.61 | 1.6 | 98.4 | 0.0 | 0.32 | 0.76 | 0.75 | 3.53 | 1.9 | 0.004 | 0.78 | 1.0 | 0.07 | 15.97 | 0.00 | 2.103 | 9.15 | 2.75 | 2.2 | 97.8 | 0.0 | 0.65 | 0.55 | 0.81 | 0.82 | 3.60 | 9036 | 1141 | 7 | 0 | 3 | 0 | 0 | logfile |
✔ | 7MW5 | 24063 | 2022-04-08 | 2021-05-15 | 3.42 | 3.24 | — | 2.0 | 0.003 | 0.69 | 0.0 | 0.05 | 15.22 | 0.01 | 2.140 | 14.17 | 0.11 | 8.0 | 91.5 | 0.6 | -1.83 | 0.84 | 0.79 | 2.29 | 2.0 | 0.007 | 0.76 | 1.0 | 0.05 | 16.40 | 0.01 | 2.094 | 17.07 | 0.22 | 10.0 | 89.6 | 0.4 | -1.65 | 1.14 | 0.84 | 0.81 | 2.04 | 33635 | 4242 | 41 | 0 | 83 | 0 | 0 | logfile |
✔ | 7N1Y | 24127 | 2022-04-07 | 2021-05-28 | 4.3 | 2.48 | — | 2.0 | 0.015 | 2.09 | 23.0 | 0.15 | 15.16 | 0.01 | 1.099 | 10.84 | 1.91 | 8.5 | 90.8 | 0.6 | -2.82 | 0.78 | 0.64 | — | 1.9 | 0.006 | 0.92 | 0.0 | 0.05 | 14.68 | 0.01 | 2.042 | 15.01 | 0.04 | 6.6 | 93.4 | 0.0 | -1.50 | 0.70 | 0.78 | 0.64 | — | 26636 | 3242 | 31 | 0 | 91 | 0 | 0 | logfile |
✔ | 7QKL | 14046 | 2022-04-04 | 2021-12-17 | 2.07 | 2.04 | 1.98 | 2.0 | 0.011 | 2.37 | 0.0 | 0.25 | 12.79 | 0.01 | 2.537 | 0.14 | 0.00 | 3.6 | 96.4 | 0.0 | -1.75 | 0.40 | 0.83 | 7.75 | 2.0 | 0.005 | 0.71 | 0.0 | 0.05 | 17.30 | 0.00 | 2.476 | 4.39 | 0.25 | 2.7 | 97.3 | 0.0 | -1.26 | 2.03 | 0.45 | 0.91 | 8.23 | 3468 | 456 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 7L1Q | 23115 | 2022-04-07 | 2020-12-15 | 3.4 | 2.29 | — | 2.0 | 0.008 | 1.29 | 6.0 | 0.07 | 14.92 | 0.01 | 1.807 | 2.68 | 2.54 | 3.7 | 96.1 | 0.2 | -0.80 | 0.72 | 0.67 | 1.56 | 1.7 | 0.007 | 0.92 | 0.0 | 0.05 | 18.00 | 0.01 | 1.739 | 18.17 | 1.41 | 5.3 | 94.6 | 0.0 | -0.45 | 2.07 | 0.73 | 0.74 | 1.50 | 24204 | 3118 | 13 | 0 | 13 | 0 | 0 | logfile |
✔ | 7JVR | 22511 | 2022-04-04 | 2020-08-22 | 2.8 | 2.21 | — | 2.0 | 0.016 | 0.95 | 0.0 | 0.07 | 8.77 | 0.01 | 2.235 | 4.64 | 0.00 | 2.8 | 97.2 | 0.0 | -0.85 | 0.74 | 0.74 | 2.70 | 2.1 | 0.004 | 0.77 | 0.0 | 0.04 | 14.52 | 0.00 | 2.222 | 15.28 | 2.06 | 2.5 | 97.5 | 0.0 | 0.43 | 0.67 | 0.75 | 0.77 | 2.53 | 8872 | 1126 | 6 | 0 | 1 | 0 | 0 | logfile |
✔ | 6YBQ | 10771 | 2022-04-08 | 2020-03-17 | 1.96 | 2.06 | — | 2.0 | 0.039 | 1.58 | 0.0 | 0.05 | 15.05 | 0.01 | 1.550 | 4.58 | 0.00 | 2.7 | 97.3 | 0.0 | -1.94 | 0.82 | 0.87 | 6.46 | 2.0 | 0.003 | 0.72 | 0.0 | 0.05 | 15.91 | 0.00 | 2.108 | 4.57 | 0.41 | 2.4 | 97.6 | 0.0 | 0.00 | 0.46 | 0.84 | 0.89 | 6.08 | 34092 | 4289 | 36 | 0 | 12 | 871 | 0 | logfile |