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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7MiJ | 23853 | 2022-12-14 | 2021-04-17 | 1.98 | 1.95 | — | 2.0 | 0.010 | 1.38 | 4.0 | 0.05 | 19.92 | 0.01 | 2.320 | 3.08 | 0.18 | 2.8 | 97.2 | 0.0 | -3.96 | 0.75 | 0.81 | 5.48 | 2.0 | 0.004 | 0.69 | 0.0 | 0.04 | 18.91 | 0.00 | 2.094 | 5.63 | 1.27 | 3.8 | 96.2 | 0.0 | 0.72 | 0.64 | 0.77 | 0.82 | 5.32 | 23010 | 2556 | 12 | 0 | 38 | 328 | 0 | logfile |
✔ | 7N1V | 24124 | 2022-12-15 | 2021-05-28 | 3.21 | 2.67 | — | 2.0 | 0.013 | 1.76 | 10.0 | 0.13 | 13.79 | 0.01 | 1.776 | 4.44 | 0.98 | 6.5 | 93.2 | 0.3 | -1.63 | 0.82 | 0.80 | 3.43 | 2.2 | 0.003 | 0.70 | 0.0 | 0.05 | 15.87 | 0.00 | 2.120 | 9.77 | 0.49 | 4.4 | 95.6 | 0.0 | -0.13 | 1.33 | 0.84 | 0.82 | 2.63 | 26947 | 3274 | 35 | 0 | 95 | 0 | 0 | logfile |
✔ | 7EiB | 31145 | 2022-12-11 | 2021-03-30 | 3.0 | 2.24 | — | 2.0 | 0.005 | 0.86 | 0.0 | 0.05 | 12.65 | 0.01 | 2.306 | 3.66 | 0.27 | 2.0 | 98.0 | 0.0 | -0.34 | 0.74 | 0.75 | 3.17 | 2.0 | 0.003 | 0.68 | 0.0 | 0.04 | 16.15 | 0.00 | 2.045 | 11.67 | 1.61 | 2.5 | 97.5 | 0.0 | 1.21 | 1.21 | 0.74 | 0.77 | 1.85 | 7204 | 928 | 5 | 0 | 0 | 0 | 0 | logfile |
✔ | 8DPH | 27635 | 2022-12-12 | 2022-07-15 | 3.2 | 2.17 | 3.16 | 2.0 | 0.005 | 0.59 | 0.0 | 0.05 | 9.34 | 0.00 | 2.162 | 3.01 | 0.73 | 1.4 | 98.6 | 0.0 | 1.66 | 0.76 | 0.73 | 2.48 | 2.0 | 0.003 | 0.62 | 0.0 | 0.04 | 14.28 | 0.00 | 2.192 | 4.95 | 0.61 | 2.9 | 97.1 | 0.0 | 0.91 | 1.06 | 0.78 | 0.77 | 2.04 | 8182 | 1093 | 6 | 0 | 3 | 0 | 0 | logfile |
✔ | 6Xi8 | 22191 | 2022-12-11 | 2020-06-19 | 3.64 | 2.63 | 3.78 | 2.0 | 0.010 | 1.69 | 4.0 | 0.11 | 15.20 | 0.01 | 1.333 | 6.79 | 0.77 | 9.0 | 91.0 | 0.0 | -4.62 | 0.66 | 0.54 | 0.71 | 2.0 | 0.004 | 0.96 | 0.0 | 0.05 | 17.05 | 0.01 | 2.101 | 19.76 | 1.74 | 7.2 | 92.8 | 0.0 | -2.47 | 1.26 | 0.69 | 0.64 | 0.24 | 5022 | 636 | 4 | 0 | 2 | 0 | 0 | logfile |
✔ | 7LVQ | 23540 | 2022-12-12 | 2021-02-26 | 2.9 | 2.12 | 2.86 | 2.0 | 0.024 | 1.33 | 1.0 | 0.09 | 14.76 | 0.01 | 1.920 | 5.41 | 0.66 | 6.4 | 93.5 | 0.1 | -3.20 | 0.55 | 0.77 | 4.09 | 2.0 | 0.004 | 0.66 | 0.0 | 0.04 | 17.27 | 0.00 | 1.934 | 8.69 | 1.42 | 3.4 | 96.6 | 0.0 | -0.01 | 1.04 | 0.58 | 0.82 | 3.38 | 9767 | 1226 | 6 | 1 | 5 | 0 | 0 | logfile |
✔ | 7V69 | 31739 | 2022-12-12 | 2021-08-20 | 3.4 | 2.24 | — | 2.0 | 0.003 | 0.65 | 0.0 | 0.04 | 12.64 | 0.00 | 2.096 | 13.46 | 0.00 | 2.9 | 97.1 | 0.0 | -2.02 | 0.68 | 0.64 | 2.22 | 2.0 | 0.003 | 0.66 | 0.0 | 0.04 | 14.96 | 0.00 | 2.103 | 15.89 | 0.34 | 5.0 | 95.0 | 0.0 | -1.07 | 1.15 | 0.70 | 0.68 | 2.12 | 8539 | 1122 | 5 | 0 | 0 | 0 | 0 | logfile |
✔ | 8DPF | 27633 | 2022-12-12 | 2022-07-15 | 2.84 | 2.18 | 2.90 | 2.0 | 0.004 | 0.77 | 0.0 | 0.07 | 10.32 | 0.00 | 2.093 | 3.71 | 0.12 | 1.8 | 98.2 | 0.0 | 1.40 | 0.78 | 0.77 | 4.38 | 2.0 | 0.003 | 0.63 | 0.0 | 0.04 | 14.01 | 0.00 | 2.167 | 4.91 | 1.22 | 2.8 | 97.2 | 0.0 | 0.74 | 1.01 | 0.80 | 0.80 | 3.04 | 8160 | 1093 | 6 | 0 | 2 | 0 | 0 | logfile |
✔ | 7WZ7 | 32905 | 2022-12-12 | 2022-02-17 | 2.83 | 2.26 | — | 2.0 | 0.010 | 0.95 | 0.0 | 0.06 | 11.50 | 0.01 | 2.230 | 7.02 | 0.00 | 5.4 | 94.6 | 0.0 | -0.69 | 0.71 | 0.71 | 2.86 | 2.0 | 0.005 | 0.69 | 0.0 | 0.04 | 14.88 | 0.00 | 2.133 | 12.89 | 2.20 | 4.6 | 95.4 | 0.0 | 0.40 | 1.18 | 0.72 | 0.73 | 1.69 | 8676 | 1108 | 5 | 0 | 0 | 0 | 0 | logfile |
✔ | 7VXE | 32177 | 2022-12-22 | 2021-11-12 | 3.2 | 2.31 | — | 2.0 | 0.003 | 0.45 | 0.0 | 0.04 | 7.36 | 0.00 | 2.082 | 1.83 | 0.00 | 4.4 | 95.5 | 0.1 | -1.79 | 0.61 | 0.54 | 2.41 | 2.1 | 0.004 | 0.58 | 0.0 | 0.04 | 12.66 | 0.00 | 1.937 | 5.05 | 0.22 | 4.0 | 95.8 | 0.2 | -0.03 | 1.47 | 0.70 | 0.73 | 2.72 | 49296 | 3186 | 3 | 0 | 0 | 0 | 24366 | logfile |
✔ | 7TiK | 25912 | 2022-12-11 | 2022-01-13 | 2.4 | 2.38 | — | 2.0 | 0.007 | 0.49 | 0.0 | 0.04 | 16.31 | 0.00 | 2.218 | 8.52 | 0.00 | 4.6 | 95.4 | 0.0 | 1.31 | 0.77 | 0.80 | 1.31 | 2.0 | 0.004 | 0.49 | 0.0 | 0.04 | 16.44 | 0.00 | 2.228 | 10.65 | 1.01 | 0.3 | 99.7 | 0.0 | 5.49 | 0.93 | 0.79 | 0.81 | 1.38 | 2565 | 339 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 8CZi | 27098 | 2022-12-11 | 2022-05-24 | 2.22 | 2.26 | 2.61 | 2.0 | 0.004 | 0.33 | 0.0 | 0.03 | 14.48 | 0.00 | 2.382 | 6.62 | 0.00 | 0.0 | 100.0 | 0.0 | 2.90 | 0.78 | 0.80 | 1.97 | 2.0 | 0.004 | 0.40 | 0.0 | 0.03 | 15.24 | 0.00 | 2.167 | 6.23 | 0.00 | 0.0 | 100.0 | 0.0 | 5.34 | 0.86 | 0.83 | 0.84 | 1.97 | 2550 | 339 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 7UWJ | 26833 | 2022-12-11 | 2022-05-03 | 3.2 | 2.38 | 3.23 | 2.0 | 0.004 | 0.78 | 1.0 | 0.05 | 12.97 | 0.01 | 2.189 | 11.24 | 0.00 | 4.1 | 95.9 | 0.0 | -2.14 | 0.66 | 0.61 | 2.04 | 1.9 | 0.003 | 0.64 | 0.0 | 0.04 | 14.84 | 0.00 | 2.225 | 9.91 | 0.67 | 5.0 | 95.0 | 0.0 | -2.00 | 0.43 | 0.68 | 0.64 | 2.01 | 5314 | 664 | 6 | 0 | 6 | 0 | 0 | logfile |
✔ | 7RZR | 24775 | 2022-12-11 | 2021-08-27 | 2.27 | 2.24 | — | 2.0 | 0.007 | 0.40 | 0.0 | 0.04 | 14.34 | 0.00 | 2.436 | 3.23 | 0.00 | 1.9 | 98.1 | 0.0 | 2.50 | 0.79 | 0.80 | 3.37 | 2.0 | 0.003 | 0.35 | 0.0 | 0.03 | 15.28 | 0.00 | 2.325 | 4.84 | 0.35 | 0.0 | 100.0 | 0.0 | 6.56 | 0.32 | 0.81 | 0.83 | 3.42 | 2448 | 324 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 7WPC | 32682 | 2022-12-11 | 2022-01-23 | 2.57 | 2.17 | — | 2.0 | 0.003 | 0.71 | 0.0 | 0.05 | 15.08 | 0.01 | 2.253 | 2.67 | 0.12 | 4.2 | 95.8 | 0.0 | -4.19 | 0.69 | 0.72 | 2.24 | 1.9 | 0.004 | 0.64 | 0.0 | 0.04 | 17.74 | 0.00 | 1.899 | 10.10 | 1.27 | 4.5 | 95.5 | 0.0 | -0.93 | 1.32 | 0.75 | 0.81 | 3.24 | 8057 | 980 | 6 | 0 | 9 | 0 | 0 | logfile |
✔ | 7RQS | 24635 | 2022-12-11 | 2021-08-07 | 3.57 | 2.31 | 3.59 | 2.0 | 0.002 | 0.54 | 0.0 | 0.04 | 13.38 | 0.00 | 2.088 | 9.94 | 0.26 | 7.6 | 92.4 | 0.0 | -0.91 | 0.70 | 0.68 | 2.53 | 2.0 | 0.003 | 0.60 | 0.0 | 0.04 | 15.72 | 0.00 | 2.001 | 11.47 | 0.13 | 8.8 | 91.1 | 0.1 | -1.03 | 0.59 | 0.70 | 0.69 | 2.33 | 7792 | 1074 | 1 | 0 | 1 | 0 | 0 | logfile |
✔ | 7QKL | 14046 | 2022-12-11 | 2021-12-17 | 2.07 | 2.04 | 1.98 | 2.0 | 0.011 | 2.37 | 0.0 | 0.25 | 12.79 | 0.01 | 2.537 | 0.71 | 0.00 | 3.6 | 96.4 | 0.0 | -1.75 | 0.40 | 0.83 | 7.75 | 2.0 | 0.005 | 0.71 | 0.0 | 0.05 | 17.30 | 0.00 | 2.476 | 5.23 | 0.25 | 2.7 | 97.3 | 0.0 | -1.26 | 2.03 | 0.44 | 0.91 | 8.23 | 3468 | 456 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 7RZU | 24778 | 2022-12-11 | 2021-08-27 | 2.3 | 2.32 | — | 2.0 | 0.006 | 0.50 | 0.0 | 0.04 | 13.61 | 0.01 | 2.212 | 7.50 | 0.00 | 2.9 | 97.1 | 0.0 | 1.69 | 0.77 | 0.78 | 1.84 | 2.0 | 0.005 | 0.52 | 0.0 | 0.03 | 15.91 | 0.00 | 2.234 | 8.11 | 1.75 | 0.0 | 100.0 | 0.0 | 4.99 | 0.49 | 0.80 | 0.81 | 1.62 | 2439 | 324 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 7UZS | 26917 | 2022-12-12 | 2022-05-09 | 2.2 | 2.05 | 2.19 | 2.0 | 0.004 | 0.72 | 0.0 | 0.05 | 17.96 | 0.01 | 2.217 | 2.70 | 1.79 | 1.1 | 98.9 | 0.0 | 1.09 | 0.64 | 0.87 | 6.60 | 2.0 | 0.003 | 0.56 | 0.0 | 0.04 | 17.93 | 0.00 | 2.035 | 4.15 | 1.43 | 2.0 | 98.0 | 0.0 | 1.16 | 0.30 | 0.64 | 0.87 | 6.29 | 10550 | 658 | 1 | 0 | 0 | 193 | 5183 | logfile |
✔ | 7U66 | 26361 | 2022-12-22 | 2022-03-03 | 3.1 | 2.19 | 3.03 | 2.0 | 0.009 | 0.80 | 0.0 | 0.05 | 14.35 | 0.00 | 2.105 | 2.93 | 0.92 | 3.5 | 96.3 | 0.2 | -0.05 | 0.78 | 0.78 | 3.54 | 2.0 | 0.002 | 0.49 | 0.0 | 0.04 | 15.76 | 0.00 | 2.147 | 3.22 | 0.23 | 1.9 | 98.1 | 0.0 | 1.20 | 1.01 | 0.79 | 0.80 | 2.91 | 26664 | 3348 | 24 | 0 | 12 | 0 | 0 | logfile |