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Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 5A6F | 3063 | 2023-02-19 | 2015-06-25 | 4.2 | 5.75 | — | 5.0 | 0.012 | 1.50 | 0.0 | 0.05 | 12.32 | 0.01 | 2.112 | 10.08 | 3.74 | 12.2 | 87.6 | 0.2 | -4.94 | 0.56 | 0.74 | — | 4.9 | 0.002 | 0.56 | 0.0 | 0.04 | 10.89 | 0.00 | 2.048 | 8.96 | 0.00 | 4.7 | 95.3 | 0.0 | -0.78 | 0.97 | 0.57 | 0.75 | — | 8881 | 540 | 2 | 0 | 43 | 0 | 4330 | logfile |
✔ | 5A6E | 3062 | 2023-02-20 | 2015-06-25 | 4.5 | 6.76 | — | 5.1 | 0.010 | 3.73 | 0.0 | 0.05 | 15.55 | 0.01 | 2.112 | 8.77 | 3.19 | 11.1 | 88.8 | 0.2 | -5.00 | 0.36 | 0.56 | — | 4.8 | 0.004 | 0.60 | 0.0 | 0.03 | 10.41 | 0.00 | 2.080 | 11.78 | 0.00 | 5.3 | 94.7 | 0.0 | -0.72 | 1.45 | 0.40 | 0.73 | — | 11093 | 634 | 4 | 0 | 182 | 0 | 5102 | logfile |
✔ | 5A8L | 3099 | 2023-02-20 | 2015-07-16 | 3.8 | 3.60 | — | 3.5 | 0.004 | 0.67 | 0.0 | 0.02 | 12.36 | 0.00 | 1.435 | 8.91 | 0.95 | 10.3 | 86.8 | 2.9 | -2.06 | 0.18 | 0.43 | 0.47 | 3.5 | 0.005 | 0.82 | 0.0 | 0.04 | 17.26 | 0.01 | 2.034 | 19.30 | 1.33 | 10.7 | 88.1 | 1.1 | -2.35 | 1.54 | 0.23 | 0.63 | 0.72 | 12264 | 624 | 9 | 347 | 0 | 0 | 0 | logfile |
✔ | 3JB6 | 6408 | 2023-02-21 | 2015-08-02 | 3.3 | 3.35 | — | 3.4 | 0.010 | 0.90 | 4.0 | 0.06 | 9.55 | 0.01 | 2.123 | 8.25 | 0.20 | 2.4 | 97.4 | 0.1 | -3.72 | 0.63 | 0.90 | 5.02 | 3.4 | 0.002 | 0.58 | 0.0 | 0.04 | 15.04 | 0.00 | 2.139 | 5.90 | 0.40 | 2.0 | 98.0 | 0.0 | 0.23 | 1.20 | 0.62 | 0.88 | 3.64 | 13904 | 1731 | 6 | 0 | 2 | 0 | 0 | logfile |
✔ | 3JB7 | 6404 | 2023-02-21 | 2015-08-03 | 4.0 | 4.13 | — | 4.1 | 0.007 | 0.76 | 3.0 | 0.05 | 10.78 | 0.00 | 0.793 | 10.58 | 1.13 | 3.9 | 95.9 | 0.2 | -2.17 | 0.76 | 0.85 | — | 4.1 | 0.003 | 0.70 | 0.0 | 0.04 | 15.38 | 0.00 | 2.174 | 10.83 | 0.60 | 2.9 | 97.0 | 0.1 | 0.06 | 0.89 | 0.78 | 0.85 | — | 14176 | 1733 | 8 | 11 | 3 | 0 | 0 | logfile |
✔ | 5ACo | 3121 | 2023-02-23 | 2015-08-17 | 4.36 | 4.52 | — | 4.3 | 0.012 | 1.91 | 3.0 | 0.11 | 10.21 | 0.02 | 1.986 | 10.66 | 0.29 | 9.1 | 88.9 | 1.9 | -2.40 | 0.70 | 0.68 | — | 4.3 | 0.004 | 0.71 | 0.0 | 0.05 | 11.25 | 0.00 | 2.046 | 11.61 | 0.05 | 7.0 | 92.5 | 0.5 | -0.83 | 1.60 | 0.82 | 0.83 | — | 21297 | 2415 | 69 | 0 | 192 | 0 | 0 | logfile |
✔ | 3JBR | 6475 | 2023-02-22 | 2015-09-29 | 4.2 | 4.39 | — | 4.2 | 0.008 | 1.30 | 0.0 | 0.06 | 8.64 | 0.00 | 1.419 | 19.19 | 0.37 | 8.1 | 84.8 | 7.0 | -3.43 | 0.66 | 0.70 | — | 4.2 | 0.003 | 0.74 | 0.0 | 0.04 | 10.79 | 0.00 | 2.077 | 14.42 | 0.00 | 11.2 | 86.7 | 2.1 | -0.60 | 1.53 | 0.66 | 0.71 | — | 16467 | 2148 | 6 | 0 | 385 | 0 | 0 | logfile |
✔ | 3JBS | 6478 | 2023-02-16 | 2015-10-13 | 2.9 | 3.04 | — | 3.2 | 0.010 | 1.32 | 0.0 | 0.06 | 8.67 | 0.01 | 2.510 | 0.00 | 0.00 | 2.9 | 97.1 | 0.0 | 0.51 | 0.21 | 0.76 | 4.15 | 3.0 | 0.003 | 0.61 | 0.0 | 0.04 | 18.11 | 0.00 | 2.225 | 5.17 | 3.95 | 1.7 | 98.3 | 0.0 | 0.99 | 1.75 | 0.21 | 0.81 | 3.63 | 1401 | 175 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 3JBT | 6480 | 2023-02-27 | 2015-10-15 | 3.8 | 3.89 | — | 3.8 | 0.008 | 1.31 | 7.0 | 0.07 | 19.56 | 0.01 | 1.919 | 70.61 | 18.24 | 8.0 | 88.3 | 3.6 | -0.65 | 0.57 | 0.50 | 0.49 | 3.8 | 0.003 | 0.78 | 0.0 | 0.04 | 16.97 | 0.00 | 1.830 | 16.09 | 0.59 | 7.8 | 91.5 | 0.7 | -1.46 | 1.75 | 0.70 | 0.68 | 0.58 | 70252 | 8736 | 28 | 0 | 21 | 0 | 0 | logfile |
✔ | 5FLU | 3222 | 2023-02-21 | 2015-10-28 | 3.8 | 3.50 | — | 3.4 | 0.009 | 0.93 | 0.0 | 0.05 | 12.31 | 0.01 | 2.213 | 3.04 | 0.00 | 8.7 | 90.1 | 1.2 | -2.36 | 0.72 | 0.64 | 0.95 | 3.2 | 0.003 | 0.70 | 0.0 | 0.04 | 15.70 | 0.00 | 2.142 | 12.31 | 0.37 | 4.7 | 95.3 | 0.0 | -0.10 | 1.37 | 0.77 | 0.78 | 1.99 | 15132 | 2119 | 13 | 0 | 0 | 0 | 0 | logfile |
✔ | 5FN3 | 3238 | 2023-02-19 | 2015-11-10 | 4.1 | 4.53 | — | 4.1 | 0.011 | 1.81 | 26.0 | 0.10 | 18.64 | 0.01 | 1.021 | 20.42 | 11.34 | 10.7 | 85.3 | 4.0 | -1.54 | 0.66 | 0.60 | — | 4.1 | 0.004 | 0.86 | 0.0 | 0.04 | 13.92 | 0.01 | 2.083 | 20.37 | 0.00 | 9.0 | 90.1 | 0.8 | -0.82 | 2.23 | 0.71 | 0.79 | — | 10291 | 1318 | 5 | 0 | 0 | 0 | 0 | logfile |
✔ | 5FN1 | 3236 | 2023-02-23 | 2015-11-10 | 3.9 | 4.00 | — | 4.7 | 0.009 | 1.18 | 0.0 | 0.07 | 11.47 | 0.00 | 0.877 | 53.81 | 0.00 | 8.8 | 88.4 | 2.8 | -3.37 | 0.24 | 0.29 | 0.57 | 3.9 | 0.005 | 0.87 | 0.0 | 0.04 | 16.79 | 0.01 | 1.856 | 24.08 | 1.08 | 13.3 | 85.7 | 1.0 | -1.33 | 2.15 | 0.41 | 0.75 | 0.99 | 61308 | 3906 | 36 | 90 | 0 | 0 | 30078 | logfile |
✔ | 5FN2 | 3237 | 2023-02-19 | 2015-11-10 | 4.2 | 4.23 | — | 4.2 | 0.009 | 1.73 | 23.0 | 0.10 | 17.98 | 0.01 | 1.890 | 19.04 | 11.69 | 11.9 | 84.1 | 3.9 | -1.77 | 0.48 | 0.55 | — | 4.2 | 0.004 | 0.94 | 0.0 | 0.05 | 14.08 | 0.01 | 2.058 | 23.36 | 0.00 | 9.2 | 90.0 | 0.8 | -1.00 | 1.13 | 0.59 | 0.72 | — | 10276 | 1309 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 5FN4 | 3239 | 2023-02-19 | 2015-11-10 | 4.0 | 4.24 | — | 4.2 | 0.010 | 1.71 | 17.0 | 0.10 | 18.07 | 0.01 | 2.131 | 10.17 | 10.51 | 12.0 | 84.8 | 3.2 | -1.44 | 0.61 | 0.55 | — | 4.1 | 0.004 | 0.89 | 0.0 | 0.05 | 17.23 | 0.01 | 2.157 | 20.43 | 0.57 | 7.4 | 91.9 | 0.6 | -0.37 | 1.73 | 0.69 | 0.79 | — | 9776 | 1250 | 5 | 0 | 0 | 0 | 0 | logfile |
✔ | 5FN5 | 3240 | 2023-02-19 | 2015-11-10 | 4.3 | 4.62 | — | 4.3 | 0.012 | 1.85 | 28.0 | 0.11 | 18.82 | 0.01 | 2.074 | 13.59 | 14.00 | 11.4 | 84.3 | 4.3 | -1.91 | 0.65 | 0.62 | — | 4.3 | 0.004 | 0.88 | 0.0 | 0.04 | 13.59 | 0.01 | 2.139 | 24.44 | 0.00 | 9.1 | 90.1 | 0.8 | -1.13 | 1.03 | 0.70 | 0.79 | — | 9645 | 1227 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 5FNA | 3241 | 2023-02-17 | 2015-11-11 | 4.8 | 4.43 | — | 4.2 | 0.013 | 1.51 | 0.0 | 0.08 | 12.32 | 0.01 | 2.219 | 36.54 | 0.00 | 6.0 | 94.0 | 0.0 | -1.83 | 0.48 | 0.71 | — | 4.2 | 0.003 | 0.98 | 0.0 | 0.05 | 13.75 | 0.00 | 2.308 | 15.29 | 0.00 | 9.6 | 90.4 | 0.0 | 0.65 | 2.49 | 0.49 | 0.77 | — | 5328 | 680 | 8 | 0 | 0 | 0 | 0 | logfile |
✔ | 3JC2 | 3245 | 2023-02-17 | 2015-11-15 | 3.6 | 3.58 | 3.97 | 3.7 | 0.012 | 1.63 | 2.0 | 0.08 | 14.90 | 0.01 | 1.175 | 18.51 | 7.32 | 11.5 | 84.5 | 4.0 | -4.52 | 0.22 | 0.59 | 1.48 | 3.6 | 0.004 | 0.86 | 0.0 | 0.04 | 17.18 | 0.00 | 2.128 | 14.33 | 0.49 | 7.4 | 91.9 | 0.6 | -1.41 | 3.32 | 0.24 | 0.53 | 1.66 | 3911 | 482 | 4 | 0 | 32 | 0 | 0 | logfile |
✘ | 3JC6 | 6534 | 2023-02-24 | 2015-11-24 | 3.7 | 4.01 | — | 3.9 | 0.009 | 1.53 | 0.0 | 0.06 | 12.91 | 0.01 | 1.203 | 39.69 | 0.87 | 9.8 | 89.0 | 1.1 | -3.87 | 0.79 | 0.76 | 1.43 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 23732 | 2953 | 12 | 0 | 1 | 0 | 0 | logfile |
✔ | 3JCA | 6441 | 2023-02-20 | 2015-11-24 | 4.8 | 4.59 | — | 4.5 | 0.012 | 1.49 | 0.0 | 0.07 | 18.62 | 0.01 | 2.370 | 2.63 | 0.00 | 7.2 | 92.8 | 0.0 | -1.87 | 0.75 | 0.75 | — | 4.5 | 0.003 | 0.67 | 0.0 | 0.04 | 19.55 | 0.01 | 2.058 | 15.25 | 0.10 | 5.1 | 94.9 | 0.0 | -0.38 | 2.47 | 0.76 | 0.77 | — | 11466 | 1226 | 16 | 80 | 4 | 0 | 0 | logfile |
✔ | 3JCF | 6551 | 2023-02-21 | 2015-12-11 | 3.8 | 4.02 | — | 3.9 | 0.004 | 1.03 | 0.0 | 0.04 | 6.81 | 0.00 | 2.057 | 8.41 | 0.00 | 4.6 | 95.4 | 0.0 | -1.63 | 0.74 | 0.81 | 2.11 | 3.9 | 0.003 | 0.67 | 0.0 | 0.04 | 12.60 | 0.00 | 1.983 | 12.49 | 0.06 | 3.4 | 96.6 | 0.0 | 1.84 | 0.69 | 0.75 | 0.85 | 1.65 | 14228 | 1745 | 10 | 0 | 13 | 0 | 0 | logfile |