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Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 5FNA | 3241 | 2023-08-09 | 2015-11-11 | 4.8 | 4.43 | — | 4.2 | 0.013 | 1.51 | 0.0 | 0.08 | 12.32 | 0.01 | 2.219 | 36.54 | 0.00 | 6.0 | 94.0 | 0.0 | -1.83 | 0.48 | 0.71 | — | 4.2 | 0.004 | 0.85 | 0.0 | 0.04 | 14.28 | 0.01 | 2.153 | 22.99 | 0.00 | 8.4 | 90.4 | 1.2 | -0.31 | 2.61 | 0.49 | 0.75 | — | 5328 | 680 | 8 | 0 | 0 | 0 | 0 | logfile |
✔ | 3JC2 | 3245 | 2023-08-09 | 2015-11-15 | 3.6 | 3.58 | 3.97 | 3.7 | 0.012 | 1.63 | 2.0 | 0.08 | 14.90 | 0.01 | 1.175 | 18.51 | 7.32 | 11.5 | 84.5 | 4.0 | -4.52 | 0.22 | 0.59 | 1.48 | 3.6 | 0.004 | 0.86 | 0.0 | 0.04 | 17.18 | 0.00 | 2.128 | 14.33 | 0.49 | 7.4 | 91.9 | 0.6 | -1.41 | 3.32 | 0.24 | 0.53 | 1.66 | 3911 | 482 | 4 | 0 | 32 | 0 | 0 | logfile |
✔ | 5GAD | 8000 | 2023-08-24 | 2015-11-24 | 3.7 | 4.17 | — | 3.9 | 0.009 | 1.11 | 1.0 | 0.05 | 15.93 | 0.01 | 1.737 | 9.19 | 10.34 | 3.5 | 96.5 | 0.1 | -3.19 | 0.77 | 0.79 | 1.52 | 3.9 | 0.008 | 0.70 | 0.0 | 0.04 | 15.17 | 0.01 | 1.037 | 20.35 | 0.82 | 4.2 | 95.7 | 0.1 | -0.22 | 2.14 | 0.81 | 0.88 | 1.33 | 98006 | 4087 | 49 | 3049 | 507 | 0 | 0 | logfile |
✔ | 3JCA | 6441 | 2023-08-12 | 2015-11-24 | 4.8 | 4.59 | — | 4.5 | 0.012 | 1.49 | 0.0 | 0.07 | 18.62 | 0.01 | 2.370 | 2.63 | 0.00 | 7.2 | 92.8 | 0.0 | -1.87 | 0.75 | 0.75 | — | 4.5 | 0.003 | 0.67 | 0.0 | 0.04 | 19.55 | 0.01 | 2.058 | 15.25 | 0.10 | 5.1 | 94.9 | 0.0 | -0.38 | 2.47 | 0.76 | 0.77 | — | 11466 | 1226 | 16 | 80 | 4 | 0 | 0 | logfile |
✘ | 3JC5 | 6535 | 2023-08-25 | 2015-11-24 | 4.7 | 5.02 | — | 4.8 | 0.009 | 1.54 | 5.0 | 0.06 | 12.17 | 0.01 | 0.300 | 46.29 | 0.63 | 9.4 | 88.9 | 1.7 | -4.21 | 0.76 | 0.60 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 40041 | 5039 | 11 | 0 | 0 | 0 | 0 | logfile |
✘ | 3JC6 | 6534 | 2023-08-17 | 2015-11-24 | 3.7 | 4.01 | — | 3.9 | 0.009 | 1.54 | 0.0 | 0.06 | 12.91 | 0.01 | 1.203 | 39.73 | 0.87 | 9.8 | 89.0 | 1.1 | -3.87 | 0.79 | 0.76 | 1.43 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 23732 | 2953 | 12 | 0 | 1 | 0 | 0 | logfile |
✘ | 3JC7 | 6536 | 2023-08-25 | 2015-11-24 | 4.8 | 5.23 | — | 4.8 | 0.009 | 1.57 | 7.0 | 0.07 | 12.16 | 0.01 | 0.163 | 42.92 | 0.45 | 8.5 | 90.1 | 1.3 | -4.10 | 0.75 | 0.53 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 40298 | 5075 | 12 | 0 | 1 | 0 | 0 | logfile |
✔ | 5GAE | 8001 | 2023-08-23 | 2015-11-25 | 3.33 | 3.45 | — | 3.3 | 0.007 | 0.94 | 0.0 | 0.04 | 14.78 | 0.00 | 1.884 | 5.65 | 5.36 | 3.0 | 96.9 | 0.1 | -2.76 | 0.79 | 0.88 | 2.24 | 3.3 | 0.008 | 0.75 | 0.0 | 0.04 | 15.29 | 0.01 | 1.725 | 13.21 | 0.86 | 4.4 | 95.5 | 0.1 | -0.31 | 2.08 | 0.79 | 0.89 | 2.33 | 95192 | 3886 | 41 | 3007 | 349 | 0 | 0 | logfile |
✔ | 5GAF | 8002 | 2023-08-23 | 2015-11-25 | 4.3 | 4.42 | — | 4.3 | 0.007 | 1.09 | 1.0 | 0.05 | 15.95 | 0.01 | 1.266 | 8.87 | 11.04 | 3.5 | 96.4 | 0.1 | -3.28 | 0.63 | 0.64 | — | 4.3 | 0.005 | 0.71 | 0.0 | 0.04 | 14.99 | 0.01 | 1.044 | 21.32 | 0.03 | 5.4 | 94.5 | 0.2 | -0.97 | 1.35 | 0.71 | 0.84 | — | 96182 | 3889 | 47 | 3049 | 452 | 0 | 0 | logfile |
✔ | 5GAG | 8003 | 2023-08-23 | 2015-11-26 | 3.8 | 3.95 | — | 3.8 | 0.007 | 1.04 | 1.0 | 0.05 | 15.71 | 0.00 | 1.789 | 8.16 | 9.03 | 3.0 | 96.9 | 0.1 | -3.35 | 0.79 | 0.90 | 1.98 | 3.8 | 0.006 | 0.73 | 0.0 | 0.04 | 15.46 | 0.01 | 0.954 | 17.90 | 1.07 | 4.6 | 95.2 | 0.1 | -0.85 | 0.69 | 0.78 | 0.88 | 2.01 | 94030 | 3598 | 46 | 3049 | 473 | 0 | 0 | logfile |
✔ | 5GAH | 8004 | 2023-08-23 | 2015-11-26 | 3.8 | 3.97 | — | 3.9 | 0.008 | 1.10 | 0.0 | 0.05 | 15.97 | 0.01 | 1.737 | 8.30 | 11.31 | 3.3 | 96.7 | 0.1 | -3.33 | 0.73 | 0.85 | 1.12 | 3.9 | 0.004 | 0.62 | 0.0 | 0.03 | 15.25 | 0.00 | 1.170 | 14.30 | 0.97 | 3.9 | 96.0 | 0.1 | -0.54 | 1.16 | 0.73 | 0.87 | 1.46 | 94027 | 3595 | 46 | 3049 | 473 | 0 | 0 | logfile |
✔ | 3JCD | 6549 | 2023-08-31 | 2015-12-01 | 3.7 | 5.07 | — | 19.0 | 0.006 | 0.83 | 0.0 | 0.04 | 14.69 | 0.00 | 1.289 | 14.63 | 0.02 | 9.6 | 85.8 | 4.5 | -2.43 | 0.34 | 0.04 | 0.30 | 3.4 | 0.005 | 1.16 | 0.0 | 0.06 | 20.49 | 0.01 | 1.400 | 48.65 | 0.88 | 15.2 | 83.4 | 1.3 | -4.28 | 2.51 | 0.71 | 0.42 | 0.16 | 147815 | 5982 | 57 | 4715 | 0 | 0 | 0 | logfile |
✔ | 5GAK | 3227 | 2023-08-17 | 2015-12-09 | 3.88 | 4.13 | — | 19.0 | 0.006 | 0.94 | 0.0 | 0.06 | 20.85 | 0.01 | 0.816 | 23.89 | 0.26 | 9.2 | 90.2 | 0.7 | -3.81 | 0.21 | 0.02 | 0.28 | 3.9 | 0.003 | 0.72 | 0.0 | 0.04 | 18.78 | 0.00 | 2.007 | 19.48 | 0.38 | 8.0 | 91.6 | 0.4 | -2.15 | 1.90 | 0.32 | 0.21 | 0.08 | 128975 | 6434 | 50 | 3597 | 234 | 0 | 0 | logfile |
✔ | 3JCF | 6551 | 2023-08-13 | 2015-12-11 | 3.8 | 4.02 | — | 3.9 | 0.004 | 1.03 | 0.0 | 0.04 | 6.81 | 0.00 | 2.057 | 8.41 | 0.00 | 4.6 | 95.4 | 0.0 | -1.63 | 0.74 | 0.81 | 2.11 | 3.9 | 0.003 | 0.67 | 0.0 | 0.04 | 12.60 | 0.00 | 1.983 | 12.49 | 0.06 | 3.4 | 96.6 | 0.0 | 1.84 | 0.69 | 0.75 | 0.85 | 1.65 | 14228 | 1745 | 10 | 0 | 13 | 0 | 0 | logfile |
✔ | 3JCi | 6555 | 2023-08-23 | 2015-12-13 | 2.9 | 3.14 | — | 3.1 | 0.010 | 0.89 | 0.0 | 0.05 | 8.65 | 0.01 | 2.239 | 18.61 | 0.00 | 2.1 | 97.3 | 0.5 | -2.08 | 0.75 | 0.85 | 5.77 | 3.1 | 0.003 | 0.65 | 0.0 | 0.04 | 15.86 | 0.00 | 2.235 | 7.01 | 1.62 | 2.7 | 97.3 | 0.0 | -0.73 | 0.69 | 0.69 | 0.86 | 4.83 | 93420 | 11400 | 60 | 0 | 0 | 0 | 0 | logfile |
✔ | 5GAM | 8011 | 2023-08-15 | 2015-12-15 | 3.7 | 4.03 | — | 3.9 | 0.008 | 1.49 | 11.0 | 0.10 | 19.79 | 0.01 | 1.976 | 11.79 | 6.60 | 10.0 | 88.2 | 1.8 | -2.90 | 0.72 | 0.57 | 1.24 | 3.9 | 0.004 | 0.87 | 0.0 | 0.05 | 18.86 | 0.00 | 2.066 | 18.19 | 0.55 | 6.9 | 93.0 | 0.2 | -1.07 | 1.70 | 0.80 | 0.79 | 1.15 | 19123 | 2002 | 13 | 166 | 19 | 0 | 0 | logfile |
✔ | 5GAP | 8014 | 2023-08-21 | 2015-12-15 | 3.6 | 3.65 | — | 3.6 | 0.008 | 1.51 | 26.0 | 0.09 | 17.39 | 0.01 | 2.143 | 7.19 | 4.23 | 8.8 | 89.7 | 1.5 | -1.15 | 0.48 | 0.48 | 1.61 | 3.6 | 0.004 | 0.75 | 0.0 | 0.04 | 17.58 | 0.00 | 2.059 | 14.66 | 0.59 | 5.3 | 94.6 | 0.1 | 0.54 | 2.22 | 0.66 | 0.78 | 1.13 | 31576 | 3503 | 12 | 143 | 82 | 0 | 0 | logfile |
✘ | 3JCJ | 6559 | 2023-08-31 | 2015-12-18 | 3.7 | 3.96 | — | 3.8 | 0.007 | 1.05 | 18.0 | 0.10 | 12.45 | 0.01 | 1.344 | 2.06 | 0.39 | 9.2 | 89.0 | 1.8 | -3.55 | 0.80 | 0.75 | 1.31 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 148347 | 6249 | 82 | 4594 | 197 | 837 | 0 | logfile |
✔ | 3JCL | 6526 | 2023-08-18 | 2015-12-21 | 4.0 | 4.03 | — | 4.0 | 0.018 | 1.83 | 9.0 | 0.09 | 9.75 | 0.01 | 2.379 | 2.74 | 0.00 | 5.2 | 94.3 | 0.6 | -0.72 | 0.71 | 0.74 | — | 4.0 | 0.003 | 0.74 | 0.0 | 0.04 | 14.59 | 0.00 | 2.114 | 12.67 | 0.44 | 7.2 | 92.7 | 0.1 | -0.57 | 1.77 | 0.70 | 0.70 | — | 24822 | 3201 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 3JCN | 3285 | 2023-08-30 | 2016-01-04 | 4.6 | 4.58 | — | 4.4 | 0.007 | 1.08 | 9.0 | 0.10 | 12.71 | 0.01 | 1.344 | 3.04 | 0.18 | 6.9 | 91.6 | 1.5 | -3.44 | 0.75 | 0.65 | — | 4.4 | 0.005 | 0.77 | 0.0 | 0.04 | 15.59 | 0.01 | 1.963 | 30.05 | 0.06 | 11.2 | 88.3 | 0.5 | -2.53 | 1.05 | 0.81 | 0.79 | — | 147292 | 6123 | 57 | 4638 | 1 | 0 | 0 | logfile |