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Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 5U07 | 8477 | 2023-02-26 | 2016-11-23 | 3.8 | 3.94 | — | 3.8 | 0.010 | 1.35 | 5.0 | 0.07 | 13.38 | 0.01 | 1.958 | 28.98 | 2.31 | 4.8 | 94.0 | 1.1 | -2.19 | 0.78 | 0.77 | 1.62 | 3.8 | 0.003 | 0.75 | 0.0 | 0.04 | 16.33 | 0.00 | 2.073 | 16.52 | 0.49 | 3.9 | 95.9 | 0.2 | 0.05 | 2.60 | 0.80 | 0.82 | 1.57 | 27681 | 3310 | 14 | 93 | 0 | 0 | 0 | logfile |
✔ | 5U0A | 8478 | 2023-02-26 | 2016-11-23 | 3.3 | 3.41 | — | 3.4 | 0.012 | 1.37 | 1.0 | 0.08 | 16.04 | 0.01 | 1.667 | 28.66 | 5.48 | 4.6 | 94.8 | 0.6 | -2.78 | 0.65 | 0.74 | 1.61 | 3.4 | 0.003 | 0.65 | 0.0 | 0.04 | 17.79 | 0.00 | 2.102 | 13.30 | 0.38 | 3.4 | 96.6 | 0.1 | 0.14 | 1.92 | 0.73 | 0.85 | 1.68 | 28923 | 3329 | 14 | 144 | 0 | 0 | 0 | logfile |
✔ | 5WQ9 | 6677 | 2023-02-22 | 2016-11-23 | 4.22 | 4.37 | — | 4.2 | 0.009 | 1.22 | 15.0 | 0.07 | 11.97 | 0.01 | 1.501 | 38.54 | 2.89 | 4.4 | 95.4 | 0.2 | -2.32 | 0.78 | 0.68 | — | 4.2 | 0.003 | 0.74 | 0.0 | 0.05 | 12.99 | 0.00 | 2.095 | 13.53 | 0.08 | 3.4 | 96.5 | 0.1 | 0.06 | 1.94 | 0.85 | 0.83 | — | 56340 | 7395 | 15 | 0 | 0 | 0 | 0 | logfile |
✔ | 5U0P | 8479 | 2023-02-23 | 2016-11-26 | 4.4 | 4.99 | — | 4.2 | 0.007 | 1.18 | 1.0 | 0.05 | 8.61 | 0.01 | 1.541 | 18.54 | 0.00 | 8.3 | 88.2 | 3.4 | -2.22 | 0.75 | 0.62 | — | 4.2 | 0.004 | 0.79 | 0.0 | 0.04 | 11.34 | 0.00 | 2.156 | 21.25 | 0.00 | 9.3 | 90.0 | 0.6 | -0.50 | 1.66 | 0.82 | 0.78 | — | 20268 | 2557 | 16 | 0 | 372 | 0 | 0 | logfile |
✔ | 5U1D | 8482 | 2023-02-18 | 2016-11-28 | 3.97 | 4.06 | — | 4.3 | 0.007 | 1.17 | 0.0 | 0.05 | 12.05 | 0.00 | 2.452 | 0.07 | 0.84 | 5.7 | 94.1 | 0.2 | -2.16 | 0.36 | 0.48 | 1.30 | 4.1 | 0.004 | 0.78 | 0.0 | 0.04 | 15.89 | 0.00 | 2.058 | 14.10 | 0.51 | 4.7 | 95.2 | 0.1 | 0.93 | 1.07 | 0.52 | 0.75 | 1.63 | 7815 | 1168 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 5U1C | 8481 | 2023-02-18 | 2016-11-28 | 3.9 | 4.05 | 4.05 | 4.0 | 0.008 | 0.91 | 0.0 | 0.05 | 19.97 | 0.01 | 1.964 | 4.76 | 0.28 | 6.3 | 93.7 | 0.0 | -4.03 | 0.65 | 0.70 | 2.74 | 4.0 | 0.003 | 0.66 | 0.0 | 0.04 | 23.55 | 0.00 | 2.006 | 14.09 | 0.57 | 2.6 | 97.4 | 0.0 | -0.05 | 1.64 | 0.70 | 0.80 | 0.96 | 8596 | 846 | 12 | 94 | 4 | 0 | 0 | logfile |
✔ | 5WRG | 6679 | 2023-02-22 | 2016-12-01 | 4.3 | 4.45 | — | 4.3 | 0.007 | 1.37 | 0.0 | 0.07 | 12.06 | 0.01 | 2.191 | 9.91 | 0.53 | 18.0 | 81.4 | 0.7 | -5.05 | 0.66 | 0.69 | — | 4.3 | 0.003 | 1.08 | 0.0 | 0.05 | 12.10 | 0.00 | 2.000 | 18.84 | 0.00 | 16.9 | 83.0 | 0.1 | -3.25 | 1.51 | 0.67 | 0.75 | — | 16317 | 2208 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 5MJS | 3522 | 2023-02-26 | 2016-12-01 | 4.6 | 4.61 | — | 4.6 | 0.010 | 1.17 | 0.0 | 0.07 | 12.53 | 0.01 | 2.131 | 12.67 | 0.66 | 10.1 | 89.9 | 0.0 | -4.35 | 0.59 | 0.79 | — | 4.6 | 0.003 | 0.78 | 0.0 | 0.05 | 14.38 | 0.01 | 2.084 | 19.28 | 0.07 | 5.6 | 94.4 | 0.0 | -1.43 | 3.01 | 0.59 | 0.79 | — | 28114 | 3569 | 17 | 4 | 4 | 0 | 0 | logfile |
✔ | 5MKE | 3523 | 2023-02-22 | 2016-12-04 | 4.3 | 4.44 | — | 4.3 | 0.009 | 1.23 | 8.0 | 0.07 | 13.62 | 0.01 | 1.806 | 56.89 | 0.82 | 18.5 | 81.1 | 0.5 | -5.74 | 0.63 | 0.63 | — | 4.4 | 0.003 | 0.90 | 0.0 | 0.05 | 14.55 | 0.00 | 2.085 | 23.61 | 0.06 | 8.9 | 91.1 | 0.0 | -3.06 | 0.93 | 0.64 | 0.68 | — | 16426 | 1908 | 11 | 0 | 34 | 0 | 0 | logfile |
✔ | 5MKF | 3524 | 2023-02-22 | 2016-12-04 | 4.2 | 4.33 | — | 4.3 | 0.010 | 1.11 | 8.0 | 0.07 | 12.67 | 0.01 | 1.989 | 33.58 | 0.52 | 11.7 | 87.5 | 0.8 | -5.40 | 0.68 | 0.70 | — | 4.3 | 0.003 | 0.74 | 0.0 | 0.05 | 13.83 | 0.00 | 2.123 | 14.82 | 0.23 | 6.1 | 93.7 | 0.2 | -2.04 | 1.39 | 0.68 | 0.76 | — | 16620 | 1932 | 12 | 0 | 41 | 0 | 0 | logfile |
✔ | 5U4J | 8506 | 2023-02-20 | 2016-12-04 | 3.7 | 3.88 | 3.59 | 3.9 | 0.009 | 1.21 | 2.0 | 0.10 | 17.20 | 0.02 | 1.797 | 2.97 | 2.82 | 5.7 | 93.9 | 0.4 | -2.95 | 0.42 | 0.80 | 2.24 | 3.8 | 0.006 | 0.81 | 0.0 | 0.04 | 16.64 | 0.01 | 2.110 | 17.08 | 1.41 | 5.3 | 94.5 | 0.2 | -1.41 | 0.66 | 0.44 | 0.79 | 1.64 | 11360 | 524 | 10 | 339 | 0 | 0 | 0 | logfile |
✘ | 5MLV | 3527 | 2023-02-22 | 2016-12-07 | 4.5 | 4.47 | — | 4.4 | 0.010 | 1.21 | 0.0 | 0.06 | 17.43 | 0.01 | 2.060 | 8.31 | 0.20 | 9.0 | 91.0 | 0.0 | -4.85 | 0.67 | 0.81 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 56928 | 7218 | 36 | 6 | 24 | 0 | 0 | logfile |
✔ | 5U6P | 8512 | 2023-02-21 | 2016-12-08 | 3.51 | 3.56 | — | 3.5 | 0.007 | 1.40 | 0.0 | 0.07 | 12.41 | 0.01 | 2.399 | 2.18 | 0.00 | 3.2 | 96.8 | 0.0 | 1.31 | 0.45 | 0.53 | 2.72 | 3.5 | 0.003 | 0.58 | 0.0 | 0.04 | 16.16 | 0.00 | 2.136 | 7.85 | 0.36 | 2.3 | 97.7 | 0.0 | 2.45 | 0.66 | 0.66 | 0.83 | 2.45 | 15640 | 2016 | 12 | 0 | 80 | 0 | 0 | logfile |
✔ | 5U6o | 8511 | 2023-02-21 | 2016-12-08 | 3.5 | 3.58 | — | 3.5 | 0.008 | 1.44 | 0.0 | 0.08 | 11.34 | 0.01 | 2.380 | 2.59 | 0.00 | 4.6 | 95.4 | 0.0 | 1.02 | 0.54 | 0.66 | 2.98 | 3.5 | 0.002 | 0.61 | 0.0 | 0.04 | 15.08 | 0.00 | 2.203 | 9.26 | 0.37 | 1.9 | 98.1 | 0.0 | 2.22 | 0.66 | 0.67 | 0.82 | 1.80 | 14480 | 1928 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 5MMJ | 3532 | 2023-02-22 | 2016-12-10 | 3.6 | 3.88 | — | 3.6 | 0.008 | 1.15 | 0.0 | 0.05 | 16.66 | 0.01 | 1.774 | 10.61 | 7.28 | 4.9 | 94.8 | 0.3 | -3.46 | 0.92 | 0.86 | 1.28 | 3.6 | 0.005 | 0.71 | 0.0 | 0.04 | 16.28 | 0.01 | 1.334 | 19.31 | 1.26 | 5.4 | 94.4 | 0.1 | -0.53 | 1.60 | 0.91 | 0.85 | 1.05 | 55315 | 2806 | 31 | 1484 | 359 | 0 | 0 | logfile |
✔ | 5U76 | 8517 | 2023-02-26 | 2016-12-11 | 3.76 | 4.46 | — | 4.4 | 0.007 | 1.04 | 0.0 | 0.06 | 13.03 | 0.00 | 1.410 | 5.10 | 0.51 | 8.4 | 91.3 | 0.2 | -3.69 | 0.56 | 0.58 | 0.90 | 4.3 | 0.004 | 0.91 | 0.0 | 0.05 | 15.82 | 0.00 | 2.145 | 21.40 | 0.48 | 5.9 | 94.1 | 0.0 | -0.64 | 2.52 | 0.64 | 0.77 | 1.13 | 28364 | 3512 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 5MP9 | 3534 | 2023-02-26 | 2016-12-16 | 4.1 | 4.19 | — | 4.1 | 0.013 | 1.32 | 15.0 | 0.07 | 16.20 | 0.01 | 1.139 | 2.81 | 2.49 | 5.8 | 93.2 | 1.0 | -3.88 | 0.64 | 0.77 | — | 4.1 | 0.003 | 0.73 | 0.0 | 0.04 | 14.26 | 0.00 | 1.941 | 11.01 | 0.03 | 3.2 | 96.6 | 0.1 | 0.26 | 1.74 | 0.61 | 0.84 | — | 67883 | 8674 | 40 | 0 | 12 | 0 | 0 | logfile |
✔ | 5MPA | 3535 | 2023-02-26 | 2016-12-16 | 4.5 | 4.58 | — | 4.5 | 0.026 | 2.51 | 100.0 | 0.13 | 15.51 | 0.02 | 1.354 | 4.49 | 1.95 | 7.7 | 90.6 | 1.8 | -4.17 | 0.58 | 0.67 | — | 4.5 | 0.004 | 0.82 | 0.0 | 0.05 | 13.65 | 0.00 | 1.910 | 17.41 | 0.08 | 4.2 | 95.7 | 0.1 | -0.37 | 2.29 | 0.58 | 0.81 | — | 67883 | 8674 | 40 | 0 | 12 | 0 | 0 | logfile |
✔ | 5MPS | 3539 | 2023-02-22 | 2016-12-18 | 3.85 | 4.03 | — | 3.9 | 0.008 | 1.41 | 13.0 | 0.11 | 15.52 | 0.01 | 1.479 | 7.71 | 2.50 | 8.5 | 90.6 | 0.9 | -2.11 | 0.73 | 0.82 | 1.54 | 3.9 | 0.003 | 0.74 | 0.0 | 0.04 | 16.68 | 0.00 | 1.889 | 16.87 | 0.35 | 5.4 | 94.5 | 0.0 | 0.17 | 0.79 | 0.73 | 0.80 | 1.17 | 58929 | 6718 | 36 | 339 | 99 | 0 | 0 | logfile |
✔ | 5UAK | 8516 | 2023-02-19 | 2016-12-19 | 3.87 | 4.12 | — | 4.2 | 0.008 | 1.08 | 0.0 | 0.06 | 13.28 | 0.00 | 2.474 | 0.43 | 0.00 | 4.3 | 95.7 | 0.0 | -3.02 | 0.42 | 0.62 | 1.39 | 4.1 | 0.003 | 0.75 | 0.0 | 0.04 | 16.32 | 0.00 | 2.186 | 12.57 | 0.60 | 3.4 | 96.6 | 0.0 | 0.68 | 1.57 | 0.53 | 0.76 | 1.17 | 9232 | 1139 | 2 | 0 | 19 | 0 | 0 | logfile |