The table shows a selection of parameters. Activate more columns using
the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 6XPD | 22285 | 2023-08-09 | 2020-07-08 | 3.8 | 3.62 | — | 3.7 | 0.007 | 0.77 | 0.0 | 0.04 | 14.37 | 0.00 | 1.461 | 13.89 | 0.20 | 9.4 | 90.6 | 0.0 | -3.83 | 0.60 | 0.85 | 1.65 | 3.6 | 0.004 | 0.74 | 0.0 | 0.04 | 16.57 | 0.00 | 1.952 | 11.43 | 0.78 | 5.4 | 94.6 | 0.0 | 1.02 | 1.38 | 0.60 | 0.83 | 2.03 | 4622 | 606 | 4 | 0 | 4 | 0 | 0 | logfile |
✔ | 7RTV | 24690 | 2023-08-09 | 2021-08-15 | 3.96 | 4.06 | — | 4.1 | 0.004 | 0.76 | 0.0 | 0.05 | 14.21 | 0.00 | 2.207 | 14.04 | 0.32 | 2.8 | 97.2 | 0.0 | 3.61 | 0.41 | 0.63 | 0.10 | 4.1 | 0.004 | 0.91 | 0.0 | 0.04 | 16.58 | 0.00 | 2.168 | 18.02 | 0.32 | 3.3 | 96.7 | 0.0 | 2.73 | 1.76 | 0.41 | 0.64 | 0.28 | 2881 | 366 | 3 | 0 | 6 | 0 | 0 | logfile |
✔ | 6X0U | 21984 | 2023-08-09 | 2020-05-17 | 3.6 | 3.62 | — | 3.6 | 0.004 | 0.62 | 0.0 | 0.04 | 14.50 | 0.00 | 2.277 | 5.74 | 0.00 | 3.7 | 96.1 | 0.3 | -5.79 | 0.26 | 0.78 | 1.89 | 3.6 | 0.002 | 0.69 | 0.0 | 0.04 | 17.79 | 0.00 | 2.197 | 7.98 | 0.29 | 3.2 | 96.8 | 0.0 | 1.27 | 0.82 | 0.27 | 0.79 | 2.52 | 3091 | 398 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 6UET | 20756 | 2023-08-09 | 2019-09-23 | 4.1 | 4.91 | — | 5.1 | 0.010 | 1.61 | 0.0 | 0.07 | 15.67 | 0.02 | 1.977 | 4.88 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.62 | 0.73 | — | 5.0 | 0.007 | 0.95 | 0.0 | 0.05 | 22.46 | 0.01 | 1.737 | 49.85 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.79 | 0.66 | 0.81 | — | 3869 | 0 | 1 | 119 | 1 | 0 | 1291 | logfile |
✔ | 6PoS | 20418 | 2023-08-09 | 2019-07-05 | 4.12 | 4.39 | — | 4.2 | 0.003 | 0.68 | 0.0 | 0.04 | 11.58 | 0.01 | 2.116 | 2.48 | 0.00 | 0.1 | 99.9 | 0.0 | -2.43 | 0.80 | 0.77 | — | 4.2 | 0.002 | 0.55 | 0.0 | 0.04 | 13.00 | 0.00 | 1.937 | 10.02 | 0.03 | 3.3 | 96.7 | 0.0 | -0.01 | 1.03 | 0.82 | 0.80 | — | 53503 | 3425 | 20 | 0 | 13 | 0 | 26853 | logfile |
✔ | 7SL9 | 25195 | 2023-08-09 | 2021-10-23 | 3.5 | 3.79 | — | 3.7 | 0.005 | 0.95 | 0.0 | 0.06 | 13.95 | 0.01 | 2.259 | 4.68 | 0.40 | 5.9 | 94.1 | 0.0 | -6.01 | 0.64 | 0.82 | 2.99 | 3.7 | 0.004 | 0.80 | 0.0 | 0.04 | 15.68 | 0.00 | 2.101 | 14.88 | 1.01 | 6.1 | 93.9 | 0.0 | -1.25 | 1.23 | 0.64 | 0.82 | 1.41 | 4712 | 619 | 3 | 0 | 1 | 0 | 0 | logfile |
✔ | 7VQ3 | 32084 | 2023-08-09 | 2021-10-19 | 3.2 | 3.40 | — | 3.4 | 0.005 | 0.55 | 0.0 | 0.04 | 14.66 | 0.00 | 2.061 | 5.90 | 0.00 | 6.6 | 93.4 | 0.0 | -0.93 | 0.65 | 0.83 | 2.45 | 3.4 | 0.002 | 0.50 | 0.0 | 0.04 | 16.61 | 0.00 | 2.240 | 6.29 | 0.00 | 3.2 | 96.8 | 0.0 | 3.25 | 0.60 | 0.63 | 0.83 | 1.84 | 6306 | 800 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 7QL1 | 14060 | 2023-08-09 | 2021-12-19 | 3.34 | 3.41 | 3.13 | 3.4 | 0.011 | 2.01 | 0.0 | 0.10 | 11.06 | 0.01 | 2.654 | 0.29 | 0.00 | 7.5 | 92.5 | 0.0 | -3.09 | 0.42 | 0.83 | 4.57 | 3.4 | 0.007 | 0.85 | 0.0 | 0.05 | 15.42 | 0.00 | 2.104 | 12.32 | 0.00 | 4.2 | 95.8 | 0.0 | -2.34 | 1.74 | 0.39 | 0.81 | 4.21 | 1671 | 219 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 7XLT | 33286 | 2023-08-09 | 2022-04-22 | 4.4 | 4.55 | 4.45 | 4.3 | 0.004 | 0.89 | 0.0 | 0.05 | 16.27 | 0.01 | 2.288 | 8.02 | 0.79 | 6.8 | 93.2 | 0.0 | -2.19 | 0.68 | 0.59 | — | 4.3 | 0.004 | 0.76 | 0.0 | 0.04 | 14.44 | 0.00 | 2.069 | 28.69 | 0.00 | 8.7 | 91.3 | 0.0 | -2.84 | 1.75 | 0.75 | 0.73 | — | 4985 | 431 | 4 | 80 | 0 | 0 | 0 | logfile |
✔ | 7LX5 | 23566 | 2023-08-09 | 2021-03-03 | 3.44 | 3.85 | 3.41 | 3.9 | 0.005 | 0.62 | 0.0 | 0.04 | 10.10 | 0.00 | 2.198 | 4.72 | 0.00 | 3.4 | 96.6 | 0.0 | -0.46 | 0.71 | 0.81 | 3.26 | 3.9 | 0.003 | 0.74 | 0.0 | 0.04 | 15.48 | 0.00 | 2.191 | 10.91 | 1.08 | 2.9 | 97.1 | 0.0 | -0.18 | 1.43 | 0.70 | 0.81 | 3.17 | 3485 | 448 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 7SC7 | 25028 | 2023-08-09 | 2021-09-27 | 2.8 | 3.66 | — | 3.3 | 0.007 | 1.08 | 1.0 | 0.06 | 14.67 | 0.01 | 2.240 | 6.50 | 1.49 | 2.4 | 97.6 | 0.0 | -1.25 | 0.73 | 0.87 | 1.85 | 3.2 | 0.005 | 0.99 | 1.0 | 0.05 | 16.95 | 0.01 | 1.998 | 23.67 | 2.66 | 3.2 | 96.8 | 0.0 | 0.75 | 0.70 | 0.72 | 0.88 | 1.52 | 107930 | 13756 | 156 | 0 | 72 | 0 | 0 | logfile |
✔ | 8EXA | 28656 | 2023-08-09 | 2022-10-25 | 3.14 | 3.45 | 3.09 | 3.4 | 0.004 | 0.54 | 0.0 | 0.03 | 17.45 | 0.00 | 2.223 | 15.79 | 0.40 | 3.6 | 96.4 | 0.0 | 0.27 | 0.61 | 0.69 | 4.07 | 3.4 | 0.003 | 0.52 | 0.0 | 0.03 | 17.87 | 0.00 | 2.219 | 16.00 | 1.21 | 3.6 | 96.4 | 0.0 | 0.46 | 1.14 | 0.60 | 0.68 | 3.76 | 5539 | 341 | 4 | 139 | 0 | 0 | 0 | logfile |
✔ | 8DVS | 27744 | 2023-08-09 | 2022-07-29 | 3.0 | 3.15 | 2.97 | 3.2 | 0.002 | 0.47 | 0.0 | 0.04 | 13.64 | 0.00 | 2.271 | 7.41 | 1.32 | 6.8 | 93.2 | 0.0 | -1.94 | 0.68 | 0.80 | 2.76 | 3.1 | 0.002 | 0.54 | 0.0 | 0.04 | 15.88 | 0.00 | 2.201 | 6.40 | 2.63 | 7.4 | 92.6 | 0.0 | 0.64 | 0.45 | 0.71 | 0.85 | 3.21 | 6058 | 682 | 3 | 26 | 3 | 0 | 0 | logfile |
✔ | 7VAF | 31839 | 2023-08-09 | 2021-08-29 | 3.11 | 3.67 | — | 3.6 | 0.002 | 0.56 | 0.0 | 0.04 | 13.38 | 0.00 | 2.264 | 8.84 | 0.00 | 7.3 | 92.7 | 0.0 | 0.32 | 0.63 | 0.80 | 2.23 | 3.6 | 0.004 | 0.72 | 0.0 | 0.05 | 15.46 | 0.00 | 2.111 | 12.11 | 0.16 | 8.5 | 91.5 | 0.0 | -0.06 | 0.51 | 0.56 | 0.79 | 2.30 | 5625 | 734 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 6ZPG | 11338 | 2023-08-09 | 2020-07-08 | 4.6 | 4.29 | — | 7.0 | 0.004 | 0.99 | 0.0 | 0.05 | 15.64 | 0.01 | 2.313 | 5.51 | 0.25 | 5.6 | 94.4 | 0.0 | -3.85 | 0.60 | 0.55 | — | 7.0 | 0.003 | 0.83 | 0.0 | 0.04 | 15.58 | 0.00 | 2.236 | 19.15 | 0.00 | 6.1 | 93.9 | 0.0 | 0.38 | 1.97 | 0.65 | 0.63 | — | 3808 | 463 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 7VQ7 | 32087 | 2023-08-09 | 2021-10-19 | 3.6 | 3.68 | — | 3.7 | 0.007 | 0.75 | 0.0 | 0.04 | 16.81 | 0.00 | 2.070 | 11.39 | 4.87 | 3.9 | 96.1 | 0.0 | -1.30 | 0.61 | 0.81 | 2.00 | 3.7 | 0.003 | 0.55 | 0.0 | 0.04 | 17.90 | 0.00 | 2.170 | 8.72 | 0.59 | 3.0 | 97.0 | 0.0 | 3.61 | 1.29 | 0.58 | 0.80 | 1.39 | 6127 | 778 | 3 | 0 | 1 | 0 | 0 | logfile |
✔ | 8DHA | 27434 | 2023-08-09 | 2022-06-25 | 3.8 | 4.85 | 4.37 | 4.8 | 0.004 | 0.76 | 0.0 | 0.05 | 17.00 | 0.01 | 2.155 | 15.08 | 0.49 | 4.8 | 95.2 | 0.0 | 0.08 | 0.69 | 0.73 | 0.68 | 4.8 | 0.004 | 0.78 | 0.0 | 0.05 | 17.77 | 0.00 | 2.108 | 13.09 | 0.49 | 5.8 | 94.2 | 0.0 | -0.54 | 0.56 | 0.69 | 0.73 | 0.85 | 3510 | 439 | 5 | 0 | 2 | 0 | 0 | logfile |
✔ | 6NT6 | 0503 | 2023-08-09 | 2019-01-28 | 4.0 | 4.22 | — | 4.1 | 0.005 | 0.79 | 0.0 | 0.04 | 11.99 | 0.01 | 2.316 | 3.70 | 0.00 | 3.8 | 96.2 | 0.0 | -3.32 | 0.69 | 0.80 | — | 4.1 | 0.002 | 0.72 | 0.0 | 0.04 | 15.61 | 0.00 | 2.295 | 7.27 | 0.00 | 2.7 | 97.3 | 0.0 | 1.43 | 1.19 | 0.69 | 0.80 | — | 4198 | 556 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 7TX6 | 26155 | 2023-08-09 | 2022-02-07 | 3.3 | 3.60 | 3.29 | 3.5 | 0.008 | 0.90 | 1.0 | 0.05 | 12.44 | 0.01 | 2.327 | 6.69 | 0.62 | 3.0 | 97.0 | 0.0 | 2.51 | 0.53 | 0.76 | 2.79 | 3.6 | 0.003 | 0.71 | 1.0 | 0.05 | 15.51 | 0.01 | 2.189 | 6.37 | 0.00 | 3.3 | 96.7 | 0.0 | 1.64 | 1.61 | 0.53 | 0.77 | 2.32 | 3169 | 398 | 1 | 0 | 2 | 0 | 0 | logfile |
✔ | 5TTP | 8467 | 2023-08-09 | 2016-11-04 | 4.8 | 4.88 | — | 4.5 | 0.006 | 1.36 | 0.0 | 0.06 | 11.70 | 0.01 | 2.038 | 24.92 | 0.00 | 14.1 | 85.2 | 0.7 | -5.87 | 0.61 | 0.60 | — | 4.6 | 0.002 | 0.77 | 0.0 | 0.04 | 5.16 | 0.00 | 2.264 | 6.32 | 0.00 | 13.8 | 85.9 | 0.4 | 0.24 | 1.81 | 0.66 | 0.69 | — | 5616 | 1138 | 2 | 0 | 0 | 0 | 0 | logfile |