The table shows a selection of parameters. Activate more columns using
the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7VXM | 32184 | 2022-12-16 | 2021-11-12 | 3.6 | 3.96 | — | 3.8 | 0.002 | 0.51 | 0.0 | 0.04 | 7.69 | 0.00 | 2.159 | 8.00 | 0.00 | 3.9 | 95.9 | 0.2 | -2.41 | 0.49 | 0.54 | 0.82 | 3.8 | 0.003 | 0.64 | 0.0 | 0.04 | 14.20 | 0.00 | 2.098 | 11.07 | 0.21 | 3.4 | 96.6 | 0.0 | 0.07 | 1.67 | 0.58 | 0.73 | 1.04 | 29901 | 3791 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 7LRD | 23495 | 2022-12-13 | 2021-02-16 | 3.22 | 4.04 | 3.18 | 3.2 | 0.003 | 0.48 | 0.0 | 0.04 | 7.70 | 0.00 | 1.795 | 4.58 | 0.25 | 1.3 | 98.7 | 0.0 | 2.71 | 0.82 | 0.76 | 2.88 | 3.3 | 0.005 | 0.54 | 0.0 | 0.04 | 10.56 | 0.00 | 1.986 | 7.90 | 0.06 | 2.5 | 97.5 | 0.0 | 2.47 | 1.19 | 0.90 | 0.88 | 2.86 | 14346 | 1766 | 8 | 0 | 8 | 0 | 0 | logfile |
✔ | 6oFH | 20046 | 2022-12-12 | 2019-03-29 | 3.7 | 3.79 | — | 3.8 | 0.008 | 0.75 | 0.0 | 0.05 | 7.71 | 0.01 | 2.097 | 3.74 | 0.00 | 5.3 | 94.7 | 0.0 | -6.76 | 0.59 | 0.83 | 1.69 | 3.8 | 0.004 | 0.71 | 0.0 | 0.04 | 17.34 | 0.00 | 2.079 | 10.79 | 0.24 | 3.8 | 96.2 | 0.0 | 2.04 | 0.85 | 0.60 | 0.84 | 0.83 | 11628 | 1482 | 19 | 0 | 0 | 0 | 0 | logfile |
✔ | 7V5G | 31724 | 2022-12-22 | 2021-08-17 | 4.47 | 4.49 | — | 3.6 | 0.002 | 0.50 | 1.0 | 0.04 | 7.72 | 0.00 | 2.210 | 9.89 | 0.08 | 5.7 | 94.2 | 0.1 | -2.80 | 0.86 | 0.71 | — | 3.8 | 0.004 | 0.76 | 0.0 | 0.05 | 12.29 | 0.00 | 2.038 | 22.61 | 0.00 | 4.8 | 95.2 | 0.0 | -0.82 | 2.26 | 0.90 | 0.79 | — | 48150 | 6193 | 28 | 0 | 0 | 0 | 0 | logfile |
✘ | 8EF6 | 28069 | 2022-12-18 | 2022-09-08 | 3.2 | 2.91 | 3.02 | 3.1 | 0.005 | 0.87 | 0.0 | 0.07 | 7.72 | 0.01 | 2.267 | 4.07 | 0.00 | 1.3 | 98.7 | 0.0 | 0.00 | 0.59 | 0.75 | 2.50 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 11686 | 1439 | 9 | 0 | 12 | 0 | 0 | logfile |
✔ | 7QND | 14075 | 2022-12-13 | 2021-12-20 | 3.4 | 3.55 | — | 3.4 | 0.002 | 0.42 | 0.0 | 0.04 | 7.74 | 0.00 | 2.210 | 5.00 | 0.45 | 0.6 | 99.4 | 0.0 | 2.54 | 0.75 | 0.83 | 3.55 | 3.4 | 0.003 | 0.66 | 0.0 | 0.04 | 13.56 | 0.00 | 2.153 | 11.47 | 0.62 | 1.4 | 98.6 | 0.0 | 1.41 | 3.37 | 0.76 | 0.87 | 3.52 | 16810 | 1995 | 19 | 0 | 33 | 0 | 0 | logfile |
✔ | 6CU8 | 7619 | 2022-12-11 | 2018-03-23 | 3.6 | 3.65 | — | 4.2 | 0.004 | 0.73 | 0.0 | 0.06 | 7.75 | 0.00 | 2.412 | 6.41 | 0.00 | 5.1 | 94.9 | 0.0 | -2.86 | 0.45 | 0.73 | -0.16 | 4.2 | 0.005 | 0.79 | 0.0 | 0.06 | 12.89 | 0.00 | 2.161 | 16.36 | 0.65 | 15.9 | 84.1 | 0.0 | -3.37 | 1.79 | 0.42 | 0.73 | 2.58 | 2880 | 410 | 10 | 0 | 0 | 0 | 0 | logfile |
✔ | 6XGC | 22180 | 2022-12-13 | 2020-06-17 | 4.1 | 4.25 | — | 4.2 | 0.001 | 0.39 | 0.0 | 0.04 | 7.78 | 0.00 | 2.215 | 5.92 | 0.16 | 2.3 | 97.7 | 0.0 | 1.43 | 0.80 | 0.81 | — | 4.2 | 0.003 | 0.66 | 0.0 | 0.04 | 11.15 | 0.00 | 2.216 | 11.51 | 0.11 | 3.4 | 96.6 | 0.0 | 0.23 | 1.32 | 0.81 | 0.82 | — | 17040 | 2157 | 21 | 0 | 21 | 0 | 0 | logfile |
✔ | 7TQV | 26073 | 2022-12-13 | 2022-01-27 | 3.43 | 3.72 | — | 3.7 | 0.002 | 0.38 | 0.0 | 0.04 | 7.79 | 0.00 | 2.162 | 5.03 | 0.82 | 3.8 | 96.2 | 0.0 | -0.34 | 0.68 | 0.69 | 2.18 | 3.6 | 0.002 | 0.55 | 0.0 | 0.04 | 12.57 | 0.00 | 2.215 | 8.30 | 0.27 | 3.7 | 96.3 | 0.0 | -0.35 | 1.51 | 0.73 | 0.77 | 2.03 | 17792 | 2083 | 8 | 66 | 0 | 0 | 0 | logfile |
✔ | 7DK6 | 30704 | 2022-12-16 | 2020-11-23 | 4.3 | 3.67 | — | 3.5 | 0.003 | 0.54 | 0.0 | 0.04 | 7.79 | 0.00 | 2.096 | 1.26 | 0.06 | 3.0 | 97.0 | 0.0 | -3.17 | 0.59 | 0.45 | — | 3.5 | 0.003 | 0.69 | 0.0 | 0.04 | 12.26 | 0.00 | 2.109 | 16.94 | 0.06 | 5.6 | 94.4 | 0.0 | -1.37 | 1.83 | 0.73 | 0.64 | — | 31448 | 4042 | 7 | 0 | 0 | 0 | 0 | logfile |
✔ | 7PG9 | 13389 | 2022-12-21 | 2021-08-13 | 3.7 | 4.05 | — | 3.7 | 0.003 | 0.63 | 0.0 | 0.04 | 7.81 | 0.00 | 2.144 | 8.65 | 0.02 | 2.9 | 97.0 | 0.1 | -2.89 | 0.85 | 0.79 | 2.74 | 3.7 | 0.005 | 0.80 | 1.0 | 0.04 | 14.02 | 0.00 | 2.157 | 12.78 | 0.37 | 3.4 | 96.6 | 0.0 | 0.58 | 0.90 | 0.90 | 0.87 | 2.57 | 45326 | 6195 | 28 | 0 | 0 | 0 | 0 | logfile |
✔ | 7DR6 | 30824 | 2022-12-12 | 2020-12-26 | 4.1 | 4.22 | — | 4.2 | 0.002 | 0.55 | 0.0 | 0.04 | 7.81 | 0.00 | 2.196 | 10.15 | 0.12 | 4.9 | 94.9 | 0.1 | -2.74 | 0.68 | 0.63 | — | 4.2 | 0.004 | 0.81 | 0.0 | 0.05 | 13.35 | 0.00 | 2.062 | 18.02 | 0.05 | 4.2 | 95.8 | 0.0 | -0.11 | 2.28 | 0.74 | 0.73 | — | 59957 | 7661 | 35 | 0 | 0 | 0 | 0 | logfile |
✔ | 7WKD | 32565 | 2022-12-13 | 2022-01-09 | 3.01 | 2.29 | — | 3.1 | 0.007 | 0.41 | 1.0 | 0.04 | 7.82 | 0.00 | 1.978 | 7.01 | 0.31 | 1.4 | 98.6 | 0.0 | -1.70 | 0.68 | 0.66 | 1.77 | 3.1 | 0.017 | 0.74 | 0.0 | 0.04 | 14.54 | 0.00 | 1.933 | 13.40 | 0.21 | 2.8 | 97.2 | 0.0 | 0.58 | 1.04 | 0.72 | 0.74 | 2.53 | 17515 | 1120 | 6 | 0 | 0 | 0 | 8712 | logfile |
✔ | 6WL1 | 21815 | 2022-12-13 | 2020-04-17 | 4.0 | 4.02 | — | 4.0 | 0.007 | 0.81 | 0.0 | 0.05 | 7.85 | 0.00 | 2.413 | 3.17 | 0.00 | 0.0 | 100.0 | 0.0 | -1.08 | 0.71 | 0.85 | — | 4.0 | 0.004 | 0.51 | 0.0 | 0.04 | 16.18 | 0.00 | 2.242 | 6.18 | 1.33 | 0.0 | 100.0 | 0.0 | 6.14 | 0.73 | 0.72 | 0.86 | — | 14612 | 1872 | 52 | 0 | 0 | 0 | 0 | logfile |
✔ | 6N2P | 9332 | 2022-12-13 | 2018-11-13 | 4.0 | 4.78 | — | 4.2 | 0.009 | 0.87 | 0.0 | 0.04 | 7.86 | 0.01 | 2.203 | 7.41 | 0.00 | 12.8 | 87.2 | 0.0 | -4.67 | 0.58 | 0.72 | — | 4.2 | 0.002 | 0.62 | 0.0 | 0.04 | 10.81 | 0.00 | 2.162 | 7.00 | 0.00 | 8.6 | 91.4 | 0.0 | 0.39 | 1.38 | 0.59 | 0.82 | — | 14570 | 880 | 10 | 0 | 0 | 0 | 7380 | logfile |
✔ | 6PZi | 20535 | 2022-12-11 | 2019-07-31 | 4.5 | 4.80 | — | 4.4 | 0.005 | 1.13 | 0.0 | 0.05 | 7.87 | 0.01 | 2.253 | 2.60 | 0.00 | 6.3 | 93.7 | 0.0 | -3.83 | 0.67 | 0.80 | — | 4.4 | 0.003 | 0.66 | 0.0 | 0.04 | 7.87 | 0.00 | 2.155 | 7.72 | 0.00 | 3.5 | 96.5 | 0.0 | 1.89 | 0.55 | 0.68 | 0.83 | — | 7985 | 1412 | 1 | 0 | 1 | 0 | 0 | logfile |
✔ | 7XA3 | 33086 | 2022-12-12 | 2022-03-17 | 2.9 | 2.18 | — | 2.1 | 0.005 | 0.85 | 0.0 | 0.05 | 7.87 | 0.01 | 2.250 | 4.34 | 0.00 | 2.5 | 97.5 | 0.0 | 0.60 | 0.75 | 0.74 | 3.21 | 1.8 | 0.003 | 0.63 | 0.0 | 0.04 | 14.26 | 0.00 | 2.179 | 9.36 | 2.19 | 3.2 | 96.8 | 0.0 | 1.58 | 0.59 | 0.77 | 0.78 | 2.64 | 9591 | 1220 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 7LH3 | 23335 | 2022-12-12 | 2021-01-21 | 4.3 | 4.87 | — | 4.6 | 0.001 | 0.40 | 0.0 | 0.04 | 7.88 | 0.00 | 2.258 | 4.81 | 1.06 | 1.8 | 98.2 | 0.0 | 2.29 | 0.61 | 0.73 | — | 4.6 | 0.003 | 0.63 | 0.0 | 0.04 | 10.63 | 0.00 | 2.270 | 10.51 | 0.00 | 3.3 | 96.7 | 0.0 | 1.88 | 1.12 | 0.63 | 0.82 | — | 10452 | 1360 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 7DRW | 30828 | 2022-12-14 | 2020-12-29 | 4.2 | 4.34 | — | 4.3 | 0.002 | 0.53 | 0.0 | 0.04 | 7.88 | 0.00 | 2.196 | 8.24 | 0.00 | 3.0 | 96.9 | 0.1 | -2.45 | 0.62 | 0.49 | — | 4.3 | 0.003 | 0.75 | 0.0 | 0.04 | 13.01 | 0.00 | 2.067 | 16.67 | 0.01 | 3.0 | 97.0 | 0.0 | 0.46 | 1.86 | 0.73 | 0.68 | — | 71650 | 9108 | 42 | 0 | 0 | 0 | 0 | logfile |
✔ | 7VXD | 32176 | 2022-12-16 | 2021-11-12 | 4.0 | 4.60 | — | 4.2 | 0.003 | 0.50 | 0.0 | 0.04 | 7.89 | 0.00 | 2.091 | 7.57 | 0.03 | 4.0 | 95.9 | 0.2 | -2.30 | 0.70 | 0.65 | — | 4.3 | 0.003 | 0.71 | 0.0 | 0.04 | 13.85 | 0.00 | 2.140 | 14.85 | 0.42 | 3.3 | 96.7 | 0.0 | -0.46 | 1.92 | 0.73 | 0.73 | — | 30194 | 3829 | 4 | 0 | 0 | 0 | 0 | logfile |