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Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7ZW6 | 14993 | 2023-12-08 | 2022-05-18 | 3.7 | 3.96 | 3.76 | 3.7 | 0.003 | 0.53 | 0.0 | 0.04 | 16.90 | 0.00 | 1.934 | 8.56 | 0.31 | 2.7 | 97.3 | 0.0 | 2.29 | 0.78 | 0.59 | 0.31 | 3.7 | 0.003 | 0.51 | 0.0 | 0.04 | 17.85 | 0.00 | 1.918 | 57.34 | 0.34 | 3.9 | 96.1 | 0.0 | 2.10 | 1.31 | 0.84 | 0.72 | 0.53 | 57112 | 6344 | 8 | 0 | 0 | 0 | 6176 | logfile |
✔ | 7S37 | 24818 | 2023-12-08 | 2021-09-04 | 3.2 | 3.10 | 3.27 | 2.3 | 0.006 | 1.04 | 0.0 | 0.05 | 14.45 | 0.01 | 2.211 | 4.66 | 0.11 | 3.7 | 96.3 | 0.0 | -1.48 | 0.74 | 0.62 | 0.31 | 2.2 | 0.003 | 0.71 | 0.0 | 0.04 | 17.40 | 0.01 | 2.101 | 15.70 | 0.54 | 3.4 | 96.6 | 0.0 | -0.03 | 1.50 | 0.77 | 0.67 | 0.49 | 9392 | 1033 | 2 | 46 | 0 | 0 | 0 | logfile |
✔ | 7KY5 | 23068 | 2023-12-09 | 2020-12-07 | 3.98 | 4.52 | — | 4.3 | 0.004 | 1.09 | 0.0 | 0.05 | 13.56 | 0.01 | 2.200 | 16.72 | 0.07 | 6.6 | 93.4 | 0.0 | -1.06 | 0.72 | 0.75 | 0.32 | 4.3 | 0.003 | 0.88 | 0.0 | 0.05 | 14.99 | 0.00 | 2.111 | 21.58 | 0.59 | 7.1 | 92.9 | 0.0 | -1.27 | 1.04 | 0.73 | 0.78 | 0.27 | 12483 | 1534 | 6 | 0 | 15 | 0 | 0 | logfile |
✔ | 7XUN | 33475 | 2023-12-07 | 2022-05-19 | 3.4 | 3.91 | 3.41 | 3.8 | 0.002 | 0.57 | 0.0 | 0.04 | 13.72 | 0.00 | 2.129 | 11.02 | 0.00 | 4.1 | 95.9 | 0.0 | -0.92 | 0.72 | 0.76 | 0.33 | 3.8 | 0.003 | 0.72 | 0.0 | 0.05 | 15.95 | 0.00 | 2.159 | 12.95 | 0.33 | 4.9 | 95.1 | 0.0 | -0.13 | 1.11 | 0.72 | 0.77 | 0.22 | 5591 | 741 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 3JAD | 6344 | 2023-12-09 | 2015-06-08 | 3.9 | 2.16 | — | 3.8 | 0.008 | 1.33 | 0.0 | 0.06 | 10.08 | 0.00 | 2.250 | 16.87 | 0.43 | 2.7 | 97.3 | 0.0 | -2.13 | 0.68 | 0.72 | 0.33 | 2.6 | 0.003 | 0.77 | 0.0 | 0.04 | 12.67 | 0.00 | 2.232 | 17.03 | 0.52 | 4.0 | 96.0 | 0.0 | 0.19 | 1.23 | 0.70 | 0.77 | 0.49 | 12705 | 1685 | 15 | 0 | 15 | 0 | 0 | logfile |
✔ | 7S1Y | 24812 | 2023-12-08 | 2021-09-02 | 3.6 | 3.90 | — | 3.9 | 0.005 | 0.77 | 2.0 | 0.04 | 12.89 | 0.01 | 1.566 | 12.97 | 0.00 | 7.2 | 92.6 | 0.2 | -0.33 | 0.40 | 0.55 | 0.33 | 3.9 | 0.003 | 0.72 | 2.0 | 0.04 | 14.86 | 0.00 | 2.189 | 13.61 | 0.52 | 6.9 | 92.9 | 0.2 | -0.45 | 0.58 | 0.51 | 0.64 | 0.51 | 6580 | 948 | 4 | 0 | 6 | 0 | 0 | logfile |
✔ | 7YR7 | 34048 | 2023-12-07 | 2022-08-09 | 3.8 | 4.63 | 4.40 | 4.6 | 0.008 | 1.25 | 1.0 | 0.09 | 25.24 | 0.01 | 2.385 | 7.94 | 4.74 | 16.7 | 83.3 | 0.0 | -5.36 | 0.64 | 0.60 | 0.33 | 4.6 | 0.004 | 0.80 | 0.0 | 0.04 | 24.96 | 0.01 | 2.119 | 23.60 | 1.09 | 21.1 | 78.9 | 0.0 | -3.46 | 1.49 | 0.67 | 0.66 | 0.64 | 5102 | 330 | 7 | 118 | 0 | 0 | 0 | logfile |
✔ | 7P1H | 13159 | 2023-12-10 | 2021-07-01 | 3.9 | 4.12 | — | 3.9 | 0.005 | 1.01 | 0.0 | 0.05 | 14.38 | 0.01 | 2.016 | 12.38 | 0.00 | 5.7 | 94.3 | 0.0 | -1.60 | 0.81 | 0.60 | 0.33 | 3.8 | 0.003 | 0.65 | 0.0 | 0.04 | 15.76 | 0.00 | 1.872 | 14.46 | 0.26 | 6.4 | 93.6 | 0.0 | -0.81 | 1.68 | 0.86 | 0.74 | 1.06 | 13957 | 898 | 4 | 0 | 2 | 0 | 6917 | logfile |
✔ | 7Y36 | 33590 | 2023-12-08 | 2022-06-10 | 2.8 | 3.76 | 2.72 | 3.7 | 0.007 | 0.73 | 0.0 | 0.05 | 12.89 | 0.00 | 2.152 | 7.06 | 0.00 | 4.2 | 95.8 | 0.0 | -1.26 | 0.57 | 0.54 | 0.34 | 3.6 | 0.003 | 0.75 | 0.0 | 0.04 | 16.83 | 0.00 | 0.249 | 10.79 | 3.23 | 3.9 | 96.1 | 0.0 | 0.37 | 1.49 | 0.63 | 0.77 | 2.04 | 9206 | 1151 | 7 | 0 | 1 | 0 | 0 | logfile |
✔ | 6UKT | 20812 | 2023-12-08 | 2019-10-05 | 3.87 | 4.71 | — | 4.3 | 0.007 | 1.03 | 0.0 | 0.06 | 16.89 | 0.01 | 2.247 | 10.29 | 0.46 | 15.8 | 84.2 | 0.0 | -5.03 | 0.89 | 0.80 | 0.36 | 4.3 | 0.003 | 0.71 | 0.0 | 0.04 | 17.55 | 0.00 | 2.116 | 15.46 | 0.11 | 12.1 | 87.9 | 0.0 | -2.31 | 0.57 | 0.90 | 0.84 | 0.27 | 8979 | 1204 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 8iSZ | 35701 | 2023-12-08 | 2023-03-21 | 3.27 | 4.42 | 3.33 | 4.2 | 0.004 | 0.85 | 0.0 | 0.06 | 20.69 | 0.01 | 1.918 | 9.90 | 0.12 | 6.8 | 93.2 | 0.0 | -2.32 | 0.78 | 0.62 | 0.36 | 4.2 | 0.004 | 0.79 | 0.0 | 0.04 | 20.64 | 0.01 | 2.129 | 18.95 | 0.61 | 6.7 | 93.3 | 0.0 | -1.40 | 1.57 | 0.82 | 0.75 | 1.02 | 8461 | 915 | 4 | 45 | 0 | 0 | 0 | logfile |
✔ | 7o6B | 12737 | 2023-12-10 | 2021-04-09 | 3.88 | 4.21 | 4.15 | 3.8 | 0.003 | 0.67 | 0.0 | 0.04 | 11.54 | 0.01 | 2.128 | 6.00 | 0.38 | 4.3 | 95.7 | 0.0 | -0.87 | 0.75 | 0.67 | 0.37 | 3.8 | 0.002 | 0.55 | 0.0 | 0.04 | 14.20 | 0.00 | 2.003 | 10.44 | 0.25 | 4.4 | 95.6 | 0.0 | 0.50 | 1.17 | 0.76 | 0.70 | 0.37 | 14200 | 879 | 1 | 0 | 0 | 0 | 7040 | logfile |
✔ | 8D43 | 27173 | 2023-12-08 | 2022-06-01 | 2.88 | 3.12 | 2.94 | 5.9 | 0.004 | 0.84 | 1.0 | 0.06 | 18.18 | 0.01 | 1.371 | 8.43 | 5.48 | 6.5 | 93.5 | 0.0 | -1.48 | 0.17 | -0.02 | 0.37 | 3.2 | 0.004 | 0.95 | 0.0 | 0.05 | 18.50 | 0.01 | 2.087 | 22.39 | 3.22 | 7.9 | 92.0 | 0.1 | -1.70 | 2.72 | 0.43 | 0.38 | 0.94 | 7763 | 962 | 5 | 0 | 6 | 1 | 0 | logfile |
✔ | 8EFD | 28080 | 2023-12-08 | 2022-09-08 | 3.8 | 4.67 | 3.83 | 3.9 | 0.002 | 0.49 | 0.0 | 0.04 | 14.10 | 0.00 | 2.048 | 8.46 | 0.13 | 3.8 | 96.2 | 0.0 | 0.81 | 0.88 | 0.79 | 0.38 | 3.9 | 0.002 | 0.61 | 0.0 | 0.04 | 15.94 | 0.00 | 2.165 | 13.04 | 0.26 | 4.5 | 95.5 | 0.0 | 0.71 | 0.55 | 0.88 | 0.80 | 0.54 | 7107 | 886 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 7DGD | 30671 | 2023-12-09 | 2020-11-11 | 3.96 | 4.40 | — | 4.2 | 0.015 | 2.08 | 10.0 | 0.12 | 15.16 | 0.01 | 1.930 | 4.79 | 3.87 | 9.2 | 89.9 | 0.9 | -4.26 | 0.61 | 0.53 | 0.38 | 4.2 | 0.004 | 0.85 | 0.0 | 0.04 | 16.24 | 0.00 | 2.143 | 19.09 | 0.15 | 9.4 | 90.5 | 0.1 | -2.00 | 1.90 | 0.69 | 0.68 | 0.77 | 12381 | 1572 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 7XK8 | 33247 | 2023-12-08 | 2022-04-19 | 3.3 | 3.49 | 3.12 | 3.4 | 0.011 | 0.48 | 0.0 | 0.04 | 11.62 | 0.00 | 2.248 | 7.78 | 0.00 | 3.1 | 96.9 | 0.0 | -1.25 | 0.55 | 0.65 | 0.38 | 3.5 | 0.006 | 0.78 | 0.0 | 0.05 | 14.86 | 0.00 | 2.025 | 16.54 | 0.90 | 4.9 | 95.1 | 0.0 | 0.05 | 0.69 | 0.59 | 0.73 | 1.00 | 6796 | 923 | 5 | 0 | 1 | 0 | 0 | logfile |
✔ | 7CKY | 30394 | 2023-12-10 | 2020-07-20 | 3.2 | 3.28 | — | 3.3 | 0.003 | 0.48 | 0.0 | 0.04 | 14.49 | 0.00 | 2.154 | 17.29 | 1.51 | 4.3 | 95.7 | 0.0 | -2.84 | 0.46 | 0.50 | 0.39 | 3.3 | 0.004 | 0.68 | 0.0 | 0.04 | 15.99 | 0.00 | 2.101 | 18.66 | 0.58 | 4.8 | 95.2 | 0.0 | -0.76 | 1.66 | 0.59 | 0.74 | 1.54 | 8128 | 1038 | 5 | 0 | 2 | 0 | 0 | logfile |
✔ | 6QB8 | 4489 | 2023-12-08 | 2018-12-20 | 3.97 | 4.19 | — | 2.3 | 0.005 | 0.96 | 0.0 | 0.06 | 15.67 | 0.01 | 2.238 | 11.60 | 0.76 | 8.2 | 91.8 | 0.0 | -4.47 | 0.89 | 0.77 | 0.40 | 2.1 | 0.004 | 0.79 | 0.0 | 0.05 | 16.49 | 0.00 | 2.037 | 28.20 | 0.27 | 9.0 | 91.0 | 0.0 | -1.64 | 1.54 | 0.89 | 0.80 | 0.52 | 60035 | 7870 | 18 | 0 | 2 | 0 | 0 | logfile |
✔ | 7M3L | 23656 | 2023-12-08 | 2021-03-18 | 3.2 | 4.99 | — | 3.3 | 0.009 | 0.97 | 0.0 | 0.06 | 15.05 | 0.01 | 1.551 | 6.78 | 0.30 | 9.1 | 90.6 | 0.3 | -3.19 | 0.29 | 0.38 | 0.40 | 3.1 | 0.004 | 0.72 | 0.0 | 0.04 | 15.15 | 0.00 | 2.043 | 15.39 | 0.30 | 7.0 | 92.8 | 0.1 | -0.73 | 3.83 | 0.46 | 0.76 | 1.89 | 6113 | 775 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 7M18 | 23615 | 2023-12-07 | 2021-03-12 | 3.38 | 4.09 | — | 4.1 | 0.007 | 1.33 | 0.0 | 0.05 | 19.80 | 0.01 | 1.728 | 23.77 | 0.28 | 10.4 | 89.3 | 0.3 | -2.48 | 0.74 | 0.73 | 0.41 | 4.1 | 0.003 | 0.79 | 0.0 | 0.04 | 19.96 | 0.01 | 2.078 | 17.84 | 0.33 | 8.5 | 91.3 | 0.1 | -1.88 | 0.55 | 0.75 | 0.74 | 0.41 | 54064 | 6904 | 32 | 8 | 16 | 0 | 0 | logfile |