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Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 3JAS | 6353 | 2022-05-17 | 2015-06-19 | 3.5 | 3.68 | — | 3.7 | 0.008 | 1.46 | 6.0 | 0.08 | 16.41 | 0.01 | 1.846 | 3.52 | 2.07 | 3.1 | 96.8 | 0.1 | 0.41 | 0.64 | 0.85 | 2.90 | 3.6 | 0.003 | 0.62 | 0.0 | 0.04 | 17.07 | 0.00 | 1.982 | 8.08 | 0.23 | 2.6 | 97.4 | 0.0 | 1.16 | 0.77 | 0.60 | 0.84 | 2.46 | 40506 | 5124 | 24 | 6 | 12 | 0 | 0 | logfile |
✔ | 3JAT | 6352 | 2022-05-17 | 2015-06-20 | 3.5 | 3.68 | — | 3.7 | 0.009 | 1.54 | 12.0 | 0.09 | 16.21 | 0.01 | 1.855 | 1.71 | 0.55 | 3.1 | 96.8 | 0.1 | 0.14 | 0.64 | 0.82 | 2.93 | 3.7 | 0.004 | 0.63 | 0.0 | 0.04 | 17.24 | 0.00 | 1.850 | 8.29 | 0.25 | 2.5 | 97.5 | 0.0 | 0.90 | 0.77 | 0.63 | 0.85 | 2.28 | 40500 | 5124 | 24 | 0 | 24 | 0 | 0 | logfile |
✔ | 3JAU | 6366 | 2022-05-14 | 2015-06-24 | 4.8 | 4.76 | — | 5.7 | 0.027 | 2.66 | 660.0 | 0.16 | 14.74 | 0.02 | 1.686 | 11.51 | 1.90 | 4.6 | 94.1 | 1.3 | -2.16 | 0.21 | 0.38 | — | 5.4 | 0.002 | 0.71 | 0.0 | 0.04 | 13.18 | 0.00 | 2.216 | 11.98 | 0.00 | 3.3 | 96.2 | 0.4 | -0.47 | 1.41 | 0.24 | 0.61 | — | 114900 | 14700 | 180 | 0 | 0 | 0 | 0 | logfile |
✔ | 3JB6 | 6408 | 2022-05-13 | 2015-08-02 | 3.3 | 3.35 | — | 3.4 | 0.010 | 0.90 | 4.0 | 0.06 | 9.55 | 0.01 | 2.123 | 8.54 | 0.20 | 2.4 | 97.4 | 0.1 | -3.72 | 0.63 | 0.90 | 5.02 | 3.4 | 0.002 | 0.58 | 0.0 | 0.04 | 15.06 | 0.00 | 2.157 | 5.94 | 0.20 | 1.8 | 98.2 | 0.0 | 0.16 | 1.19 | 0.63 | 0.88 | 3.71 | 13904 | 1731 | 6 | 0 | 2 | 0 | 0 | logfile |
✔ | 3JB7 | 6404 | 2022-05-13 | 2015-08-03 | 4.0 | 4.13 | — | 4.1 | 0.007 | 0.76 | 3.0 | 0.05 | 10.78 | 0.00 | 0.793 | 10.69 | 1.13 | 3.9 | 95.9 | 0.2 | -2.17 | 0.76 | 0.85 | — | 4.1 | 0.003 | 0.68 | 0.0 | 0.04 | 15.37 | 0.00 | 2.188 | 10.87 | 0.66 | 2.6 | 97.3 | 0.1 | 0.19 | 0.89 | 0.78 | 0.85 | — | 14176 | 1733 | 8 | 11 | 3 | 0 | 0 | logfile |
✔ | 3JB9 | 6413 | 2022-05-16 | 2015-08-09 | 3.6 | 3.70 | — | 3.6 | 0.010 | 1.29 | 13.0 | 0.07 | 16.84 | 0.01 | 1.253 | 18.11 | 8.06 | 9.1 | 87.9 | 3.0 | -3.97 | 0.52 | 0.51 | 1.26 | 3.6 | 0.007 | 0.90 | 2.0 | 0.04 | 17.16 | 0.01 | 1.525 | 16.23 | 0.17 | 6.3 | 93.0 | 0.8 | -1.24 | 0.93 | 0.56 | 0.64 | 1.07 | 86551 | 9194 | 50 | 328 | 1328 | 0 | 0 | logfile |
✔ | 3JBR | 6475 | 2022-05-14 | 2015-09-29 | 4.2 | 4.39 | — | 4.2 | 0.008 | 1.30 | 0.0 | 0.06 | 8.64 | 0.00 | 1.419 | 19.29 | 0.37 | 8.1 | 84.8 | 7.0 | -3.43 | 0.66 | 0.70 | — | 4.2 | 0.003 | 0.76 | 0.0 | 0.04 | 11.15 | 0.00 | 2.086 | 14.97 | 0.09 | 11.5 | 86.4 | 2.1 | -0.82 | 1.54 | 0.66 | 0.70 | — | 16467 | 2148 | 6 | 0 | 385 | 0 | 0 | logfile |
✔ | 3JBS | 6478 | 2022-05-12 | 2015-10-13 | 2.9 | 3.04 | — | 3.2 | 0.010 | 1.32 | 0.0 | 0.06 | 8.67 | 0.01 | 2.510 | 0.00 | 0.00 | 2.9 | 97.1 | 0.0 | 0.51 | 0.21 | 0.76 | 4.15 | 3.0 | 0.004 | 0.63 | 0.0 | 0.04 | 18.27 | 0.00 | 2.222 | 7.93 | 3.29 | 1.7 | 98.3 | 0.0 | 0.83 | 1.30 | 0.22 | 0.81 | 3.95 | 1401 | 175 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 3JBT | 6480 | 2022-05-14 | 2015-10-15 | 3.8 | 3.89 | — | 3.8 | 0.008 | 1.31 | 7.0 | 0.07 | 19.56 | 0.01 | 1.919 | 70.93 | 18.24 | 8.0 | 88.3 | 3.6 | -0.65 | 0.57 | 0.50 | 0.49 | 3.8 | 0.003 | 0.78 | 0.0 | 0.04 | 16.92 | 0.00 | 1.871 | 15.41 | 0.42 | 7.1 | 92.1 | 0.8 | -1.31 | 1.73 | 0.69 | 0.66 | 0.68 | 70252 | 8736 | 28 | 0 | 21 | 0 | 0 | logfile |
✔ | 3JBU | 6483 | 2022-05-18 | 2015-10-16 | 3.64 | 3.71 | — | 3.6 | 0.008 | 1.32 | 5.0 | 0.10 | 19.19 | 0.01 | 0.232 | 33.74 | 2.84 | 8.0 | 89.1 | 2.9 | -2.66 | 0.70 | 0.74 | 0.87 | 3.6 | 0.009 | 0.91 | 3.0 | 0.04 | 17.86 | 0.01 | 1.755 | 15.97 | 0.33 | 9.1 | 90.5 | 0.5 | -2.28 | 2.04 | 0.72 | 0.78 | 0.95 | 143334 | 5599 | 54 | 4638 | 0 | 0 | 0 | logfile |
✔ | 3JBV | 6486 | 2022-05-19 | 2015-10-16 | 3.32 | 3.40 | — | 3.3 | 0.007 | 1.32 | 4.0 | 0.10 | 19.58 | 0.01 | 0.389 | 31.42 | 3.04 | 8.1 | 88.9 | 3.0 | -2.71 | 0.67 | 0.78 | 1.48 | 3.3 | 0.008 | 0.87 | 2.0 | 0.04 | 18.03 | 0.01 | 1.836 | 15.06 | 0.36 | 9.4 | 90.0 | 0.6 | -2.20 | 1.56 | 0.69 | 0.80 | 1.50 | 145911 | 5734 | 57 | 4712 | 1 | 0 | 0 | logfile |
✔ | 3JBW | 6489 | 2022-05-17 | 2015-10-21 | 4.6 | 4.71 | — | 4.6 | 0.013 | 1.70 | 1.0 | 0.08 | 21.70 | 0.01 | 1.977 | 22.80 | 4.88 | 5.6 | 93.6 | 0.9 | -3.37 | 0.75 | 0.79 | — | 4.6 | 0.004 | 0.80 | 0.0 | 0.04 | 21.59 | 0.01 | 2.115 | 22.64 | 0.06 | 5.4 | 94.4 | 0.2 | -0.90 | 1.70 | 0.76 | 0.80 | — | 19997 | 1946 | 12 | 222 | 2 | 0 | 0 | logfile |
✔ | 3JBX | 6487 | 2022-05-16 | 2015-10-22 | 3.4 | 3.51 | — | 3.6 | 0.006 | 1.24 | 1.0 | 0.05 | 21.13 | 0.01 | 1.816 | 16.87 | 11.74 | 6.1 | 93.8 | 0.1 | -3.11 | 0.75 | 0.80 | 2.08 | 3.5 | 0.004 | 0.77 | 0.0 | 0.04 | 21.52 | 0.01 | 2.088 | 16.62 | 0.76 | 4.3 | 95.5 | 0.1 | -0.65 | 0.79 | 0.75 | 0.82 | 1.82 | 16670 | 1802 | 14 | 116 | 6 | 0 | 0 | logfile |
✔ | 3JBY | 6488 | 2022-05-16 | 2015-10-22 | 3.7 | 3.78 | — | 3.8 | 0.015 | 1.57 | 0.0 | 0.07 | 20.72 | 0.01 | 2.015 | 24.87 | 5.74 | 4.2 | 95.5 | 0.3 | -3.60 | 0.77 | 0.83 | 2.24 | 3.7 | 0.005 | 0.78 | 0.0 | 0.04 | 21.25 | 0.01 | 2.173 | 14.91 | 0.51 | 4.6 | 95.1 | 0.3 | -0.23 | 0.86 | 0.75 | 0.82 | 1.50 | 16846 | 1802 | 12 | 124 | 6 | 0 | 0 | logfile |
✔ | 3JC1 | 6461 | 2022-05-16 | 2015-11-09 | 4.0 | 4.30 | — | 4.3 | 0.009 | 1.19 | 0.0 | 0.05 | 10.37 | 0.00 | 2.291 | 8.81 | 0.00 | 3.8 | 96.2 | 0.0 | -3.91 | 0.31 | 0.59 | — | 4.3 | 0.009 | 0.98 | 2.0 | 0.04 | 15.96 | 0.00 | 1.718 | 14.77 | 0.23 | 1.9 | 98.1 | 0.0 | 3.07 | 1.23 | 0.43 | 0.75 | — | 92106 | 11628 | 68 | 0 | 0 | 0 | 0 | logfile |
✔ | 3JC2 | 3245 | 2022-05-12 | 2015-11-15 | 3.6 | 3.58 | 3.97 | 3.7 | 0.012 | 1.63 | 2.0 | 0.08 | 14.90 | 0.01 | 1.175 | 18.51 | 7.32 | 11.5 | 84.5 | 4.0 | -4.52 | 0.22 | 0.59 | 1.48 | 3.6 | 0.017 | 1.85 | 1.0 | 0.04 | 17.47 | 0.01 | 2.061 | 19.15 | 0.00 | 7.9 | 91.3 | 0.9 | -1.89 | 2.29 | 0.24 | 0.53 | 1.41 | 3911 | 482 | 4 | 0 | 32 | 0 | 0 | logfile |
✔ | 3JC5 | 6535 | 2022-05-17 | 2015-11-24 | 4.7 | 5.02 | — | 4.8 | 0.009 | 1.54 | 5.0 | 0.06 | 12.17 | 0.01 | 0.300 | 46.35 | 0.63 | 9.4 | 88.9 | 1.7 | -4.21 | 0.76 | 0.60 | — | 4.8 | 0.004 | 1.01 | 0.0 | 0.05 | 13.22 | 0.00 | 1.966 | 23.19 | 0.02 | 9.3 | 89.9 | 0.9 | -1.49 | 1.56 | 0.83 | 0.78 | — | 40041 | 5039 | 11 | 0 | 0 | 0 | 0 | logfile |
✔ | 3JC6 | 6534 | 2022-05-15 | 2015-11-24 | 3.7 | 4.01 | — | 3.9 | 0.009 | 1.53 | 0.0 | 0.06 | 12.91 | 0.01 | 1.203 | 39.77 | 0.87 | 9.8 | 89.0 | 1.1 | -3.87 | 0.79 | 0.76 | 1.43 | 3.9 | 0.004 | 1.16 | 0.0 | 0.05 | 16.98 | 0.01 | 2.018 | 20.74 | 0.79 | 9.7 | 89.5 | 0.8 | -1.58 | 1.58 | 0.82 | 0.77 | 1.09 | 23732 | 2953 | 12 | 0 | 1 | 0 | 0 | logfile |
✘ | 3JC7 | 6536 | 2022-05-17 | 2015-11-24 | 4.8 | 5.23 | — | 4.8 | 0.009 | 1.57 | 7.0 | 0.07 | 12.16 | 0.01 | 0.163 | 42.96 | 0.45 | 8.5 | 90.1 | 1.3 | -4.10 | 0.75 | 0.53 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 40298 | 5075 | 12 | 0 | 1 | 0 | 0 | logfile |
✘ | 3JCA | 6441 | 2022-05-13 | 2015-11-24 | 4.8 | 4.59 | — | 4.5 | 0.012 | 1.49 | 0.0 | 0.07 | 18.62 | 0.01 | 2.370 | 3.54 | 0.00 | 7.2 | 92.8 | 0.0 | -1.87 | 0.75 | 0.75 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 11466 | 1226 | 16 | 80 | 4 | 0 | 0 | logfile |