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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 6HD5 | 0201 | 2023-07-05 | 2018-08-17 | 4.8 | 6.01 | — | 5.9 | 0.001 | 0.40 | 0.0 | 0.03 | 8.70 | 0.00 | 2.289 | 4.36 | 0.10 | 10.5 | 88.4 | 1.1 | -1.81 | 0.36 | 0.32 | — | 5.9 | 0.004 | 0.81 | 0.0 | 0.04 | 11.92 | 0.01 | 2.072 | 21.86 | 0.00 | 6.4 | 93.5 | 0.1 | -0.40 | 2.04 | 0.46 | 0.56 | — | 9707 | 1234 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 6HD7 | 0202 | 2023-07-16 | 2018-08-17 | 3.4 | 3.54 | — | 3.3 | 0.002 | 0.43 | 0.0 | 0.03 | 14.93 | 0.00 | 0.345 | 24.96 | 0.08 | 11.1 | 87.1 | 1.9 | -3.26 | 0.66 | 0.65 | 0.74 | 3.3 | 0.007 | 0.78 | 0.0 | 0.04 | 17.87 | 0.00 | 2.034 | 18.45 | 0.79 | 7.7 | 91.9 | 0.4 | -1.42 | 1.57 | 0.76 | 0.88 | 1.83 | 141153 | 7514 | 52 | 3767 | 234 | 0 | 0 | logfile |
✔ | 6HDD | 0204 | 2023-07-13 | 2018-08-17 | 4.5 | 5.28 | — | 4.4 | 0.009 | 1.36 | 3.0 | 0.08 | 12.60 | 0.01 | 2.220 | 12.08 | 1.07 | 18.3 | 81.6 | 0.1 | -6.11 | 0.74 | 0.42 | — | 8.5 | 0.005 | 1.07 | 0.0 | 0.05 | 13.67 | 0.01 | 1.438 | 29.15 | 0.00 | 16.5 | 83.1 | 0.4 | -3.27 | 5.54 | 0.87 | 0.54 | — | 28154 | 3605 | 7 | 0 | 0 | 0 | 0 | logfile |
✔ | 6HE4 | 0209 | 2023-07-06 | 2018-08-20 | 4.85 | 4.88 | — | 4.8 | 0.036 | 3.65 | 111.0 | 0.21 | 18.70 | 0.03 | 1.953 | 1.83 | 3.66 | 6.4 | 89.5 | 4.1 | -2.84 | 0.55 | 0.56 | — | 4.8 | 0.005 | 1.03 | 0.0 | 0.05 | 14.57 | 0.01 | 1.807 | 30.94 | 0.00 | 8.2 | 91.1 | 0.7 | -1.51 | 2.38 | 0.59 | 0.77 | — | 12684 | 1602 | 11 | 0 | 10 | 0 | 0 | logfile |
✔ | 6HE5 | 0210 | 2023-07-11 | 2018-08-20 | 4.12 | 4.16 | — | 4.2 | 0.036 | 3.51 | 183.0 | 0.20 | 17.65 | 0.03 | 2.236 | 2.09 | 4.51 | 5.3 | 92.5 | 2.2 | -2.68 | 0.54 | 0.60 | — | 4.1 | 0.005 | 0.88 | 0.0 | 0.05 | 14.49 | 0.00 | 2.074 | 22.24 | 0.00 | 4.4 | 95.4 | 0.2 | -0.85 | 1.76 | 0.58 | 0.76 | — | 24633 | 3162 | 20 | 0 | 0 | 0 | 0 | logfile |
✘ | 6HiN | 0225 | 2023-07-07 | 2018-08-30 | 4.1 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 14220 | 1675 | 20 | 0 | 30 | 0 | 0 | logfile |
✘ | 6Hio | 0226 | 2023-07-08 | 2018-08-30 | 4.2 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 16085 | 1925 | 20 | 0 | 30 | 0 | 0 | logfile |
✘ | 6HiQ | 0227 | 2023-07-08 | 2018-08-30 | 3.2 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 16110 | 1925 | 20 | 0 | 30 | 0 | 0 | logfile |
✔ | 6HiS | 0228 | 2023-07-08 | 2018-08-30 | 4.5 | 4.60 | — | 4.5 | 0.011 | 1.57 | 0.0 | 0.08 | 11.99 | 0.01 | 2.228 | 16.80 | 0.29 | 4.9 | 95.1 | 0.0 | -2.60 | 0.76 | 0.77 | — | 4.5 | 0.003 | 0.78 | 0.0 | 0.05 | 13.29 | 0.00 | 1.962 | 14.29 | 0.00 | 7.8 | 92.2 | 0.0 | -1.75 | 0.92 | 0.76 | 0.77 | — | 16240 | 1935 | 25 | 0 | 40 | 0 | 0 | logfile |
✔ | 6HiZ | 0233 | 2023-07-13 | 2018-08-31 | 3.08 | 3.20 | 3.05 | 3.1 | 0.009 | 1.39 | 0.0 | 0.06 | 18.08 | 0.01 | 1.866 | 11.16 | 12.80 | 3.2 | 96.7 | 0.1 | -2.90 | 0.89 | 0.91 | 2.63 | 3.1 | 0.002 | 0.58 | 0.0 | 0.04 | 16.93 | 0.00 | 1.989 | 8.25 | 0.16 | 3.3 | 96.7 | 0.0 | 1.26 | 0.78 | 0.87 | 0.89 | 2.62 | 76845 | 9056 | 33 | 143 | 19 | 3 | 0 | logfile |
✔ | 6HJN | 0234 | 2023-07-06 | 2018-09-04 | 3.3 | 3.88 | 3.28 | 3.6 | 0.008 | 1.23 | 3.0 | 0.11 | 12.09 | 0.02 | 1.734 | 5.04 | 2.80 | 8.9 | 91.1 | 0.0 | -3.22 | 0.91 | 0.91 | 4.09 | 3.6 | 0.003 | 0.68 | 0.0 | 0.04 | 14.00 | 0.00 | 2.096 | 6.24 | 0.16 | 8.3 | 91.7 | 0.0 | -0.32 | 0.55 | 0.89 | 0.89 | 3.27 | 12309 | 1488 | 24 | 0 | 48 | 0 | 0 | logfile |
✔ | 6HJP | 0235 | 2023-07-10 | 2018-09-04 | 3.3 | 3.74 | 3.29 | 3.5 | 0.008 | 1.17 | 9.0 | 0.09 | 11.65 | 0.02 | 2.158 | 3.91 | 2.40 | 7.9 | 91.9 | 0.2 | -2.34 | 0.88 | 0.90 | 3.43 | 3.5 | 0.003 | 0.64 | 0.0 | 0.04 | 13.89 | 0.00 | 2.067 | 6.05 | 0.34 | 4.8 | 95.2 | 0.0 | 0.10 | 0.63 | 0.87 | 0.89 | 2.88 | 22134 | 2784 | 30 | 0 | 51 | 0 | 0 | logfile |
✔ | 6HJQ | 0236 | 2023-07-10 | 2018-09-04 | 4.1 | 4.38 | 4.03 | 4.1 | 0.006 | 0.94 | 0.0 | 0.06 | 10.07 | 0.01 | 1.406 | 4.81 | 0.13 | 5.6 | 94.3 | 0.1 | -3.06 | 0.83 | 0.87 | — | 4.1 | 0.003 | 0.68 | 0.0 | 0.04 | 11.52 | 0.00 | 2.000 | 9.92 | 0.00 | 5.4 | 94.6 | 0.0 | -0.55 | 1.66 | 0.83 | 0.87 | — | 22530 | 2871 | 27 | 0 | 42 | 0 | 0 | logfile |
✔ | 6HJR | 0237 | 2023-07-06 | 2018-09-04 | 4.2 | 4.57 | 4.24 | 4.3 | 0.009 | 1.13 | 0.0 | 0.07 | 11.24 | 0.01 | 2.200 | 6.58 | 0.70 | 10.6 | 89.2 | 0.2 | -3.38 | 0.84 | 0.88 | — | 4.3 | 0.002 | 0.65 | 0.0 | 0.04 | 12.00 | 0.00 | 2.090 | 9.54 | 0.00 | 7.3 | 92.5 | 0.1 | -0.81 | 0.60 | 0.83 | 0.87 | — | 12579 | 1578 | 19 | 0 | 31 | 0 | 0 | logfile |
✔ | 6HKo | 0238 | 2023-07-16 | 2018-09-07 | 3.42 | 3.56 | — | 3.5 | 0.006 | 0.90 | 0.0 | 0.06 | 11.98 | 0.01 | 1.761 | 5.34 | 0.14 | 5.6 | 94.4 | 0.0 | -4.42 | 0.73 | 0.83 | 3.57 | 3.5 | 0.003 | 0.65 | 0.0 | 0.04 | 16.11 | 0.00 | 1.931 | 11.64 | 0.52 | 4.3 | 95.7 | 0.0 | -0.85 | 1.29 | 0.74 | 0.86 | 2.78 | 34518 | 4154 | 23 | 73 | 8 | 0 | 0 | logfile |
✔ | 6HLQ | 0239 | 2023-07-15 | 2018-09-11 | 3.18 | 3.18 | — | 3.2 | 0.006 | 0.90 | 0.0 | 0.06 | 12.11 | 0.01 | 1.742 | 5.18 | 0.09 | 4.6 | 95.4 | 0.0 | -4.49 | 0.68 | 0.82 | 4.22 | 3.2 | 0.002 | 0.59 | 0.0 | 0.04 | 16.51 | 0.00 | 1.964 | 9.13 | 0.40 | 3.0 | 97.0 | 0.0 | -0.28 | 0.72 | 0.69 | 0.86 | 3.21 | 32731 | 3926 | 22 | 73 | 9 | 0 | 0 | logfile |
✔ | 6HMA | 0243 | 2023-07-14 | 2018-09-12 | 2.65 | 2.72 | 2.61 | 2.7 | 0.012 | 1.00 | 0.0 | 0.06 | 13.74 | 0.01 | 1.546 | 2.29 | 0.00 | 7.3 | 92.7 | 0.0 | -4.23 | 0.49 | 0.72 | 4.01 | 2.7 | 0.008 | 0.83 | 0.0 | 0.04 | 15.49 | 0.01 | 1.841 | 5.09 | 4.66 | 6.7 | 93.3 | 0.0 | -1.59 | 1.30 | 0.71 | 0.87 | 3.33 | 86401 | 3039 | 36 | 2949 | 237 | 0 | 0 | logfile |
✔ | 6HN4 | 0246 | 2023-07-04 | 2018-09-14 | 4.2 | 4.43 | — | 4.1 | 0.007 | 1.50 | 2.0 | 0.07 | 9.75 | 0.01 | 2.187 | 6.18 | 0.00 | 6.9 | 91.4 | 1.8 | -2.18 | 0.73 | 0.70 | — | 4.2 | 0.003 | 0.72 | 0.0 | 0.05 | 11.68 | 0.00 | 2.112 | 13.53 | 0.00 | 7.7 | 92.3 | 0.0 | -0.37 | 1.14 | 0.76 | 0.77 | — | 5702 | 700 | 2 | 0 | 6 | 0 | 0 | logfile |
✔ | 6HN5 | 0247 | 2023-07-04 | 2018-09-14 | 3.2 | 3.48 | — | 3.3 | 0.012 | 1.20 | 0.0 | 0.07 | 9.75 | 0.01 | 2.281 | 7.43 | 0.12 | 10.8 | 89.2 | 0.0 | -3.94 | 0.76 | 0.77 | 3.25 | 3.3 | 0.003 | 0.70 | 0.0 | 0.05 | 13.19 | 0.00 | 2.182 | 10.21 | 0.35 | 7.3 | 92.7 | 0.0 | -2.09 | 0.77 | 0.78 | 0.80 | 2.25 | 7869 | 953 | 7 | 0 | 11 | 0 | 0 | logfile |
✔ | 6HRA | 0257 | 2023-07-05 | 2018-09-26 | 3.7 | 3.89 | 3.68 | 3.8 | 0.007 | 0.93 | 0.0 | 0.05 | 9.85 | 0.01 | 2.227 | 6.64 | 0.18 | 7.4 | 92.6 | 0.0 | -5.34 | 0.70 | 0.83 | 2.52 | 3.8 | 0.003 | 0.72 | 0.0 | 0.04 | 13.93 | 0.00 | 2.089 | 12.23 | 1.06 | 4.9 | 95.1 | 0.0 | -0.84 | 1.64 | 0.71 | 0.85 | 1.41 | 10818 | 1450 | 5 | 0 | 3 | 0 | 0 | logfile |