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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 6HCY | 0199 | 2022-05-13 | 2018-08-17 | 3.1 | 3.48 | 3.04 | 3.4 | 0.030 | 1.92 | 0.0 | 0.06 | 19.58 | 0.02 | 2.017 | 2.67 | 0.79 | 6.2 | 93.8 | 0.0 | -6.30 | 0.67 | 0.89 | 5.10 | 3.4 | 0.003 | 1.01 | 0.0 | 0.04 | 18.72 | 0.00 | 2.248 | 7.53 | 0.44 | 4.5 | 95.5 | 0.0 | 0.47 | 1.76 | 0.73 | 0.92 | 3.31 | 11007 | 1308 | 6 | 0 | 15 | 0 | 0 | logfile |
✔ | 6HD1 | 0200 | 2022-05-13 | 2018-08-17 | 3.8 | 3.97 | 3.67 | 3.8 | 0.030 | 1.89 | 0.0 | 0.06 | 19.38 | 0.02 | 1.971 | 3.40 | 0.79 | 6.2 | 93.8 | 0.0 | -5.57 | 0.74 | 0.85 | 3.28 | 3.8 | 0.003 | 1.04 | 0.0 | 0.04 | 18.95 | 0.00 | 2.265 | 10.47 | 0.62 | 4.5 | 95.5 | 0.0 | 0.24 | 0.81 | 0.74 | 0.85 | 2.15 | 11007 | 1308 | 6 | 0 | 15 | 0 | 0 | logfile |
✔ | 6HD5 | 0201 | 2022-05-13 | 2018-08-17 | 4.8 | 6.01 | — | 5.9 | 0.001 | 0.40 | 0.0 | 0.03 | 8.70 | 0.00 | 2.289 | 4.52 | 0.10 | 10.5 | 88.4 | 1.1 | -1.81 | 0.36 | 0.32 | — | 5.9 | 0.003 | 0.73 | 0.0 | 0.04 | 11.96 | 0.00 | 2.138 | 15.29 | 0.00 | 5.4 | 94.5 | 0.1 | -0.09 | 2.01 | 0.45 | 0.55 | — | 9707 | 1234 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 6HD7 | 0202 | 2022-05-18 | 2018-08-17 | 3.4 | 3.54 | — | 3.3 | 0.002 | 0.43 | 0.0 | 0.03 | 14.93 | 0.00 | 0.345 | 25.04 | 0.08 | 11.1 | 87.1 | 1.9 | -3.26 | 0.66 | 0.65 | 0.74 | 3.3 | 0.007 | 0.79 | 0.0 | 0.04 | 17.84 | 0.01 | 1.953 | 18.84 | 0.71 | 7.3 | 92.3 | 0.4 | -1.37 | 1.56 | 0.76 | 0.87 | 1.70 | 141153 | 7514 | 52 | 3767 | 234 | 0 | 0 | logfile |
✔ | 6HDD | 0204 | 2022-05-15 | 2018-08-17 | 4.5 | 5.28 | — | 4.4 | 0.009 | 1.36 | 3.0 | 0.08 | 12.60 | 0.01 | 2.220 | 12.08 | 1.07 | 18.3 | 81.6 | 0.1 | -6.11 | 0.74 | 0.42 | — | 8.5 | 0.004 | 1.00 | 0.0 | 0.05 | 13.37 | 0.01 | 1.472 | 25.40 | 0.00 | 17.3 | 82.3 | 0.4 | -3.48 | 5.56 | 0.82 | 0.49 | — | 28154 | 3605 | 7 | 0 | 0 | 0 | 0 | logfile |
✘ | 6HE4 | 0209 | 2022-05-13 | 2018-08-20 | 4.85 | 4.88 | — | 4.8 | 0.036 | 3.64 | 111.0 | 0.21 | 18.70 | 0.03 | 1.953 | 1.87 | 3.66 | 6.4 | 89.5 | 4.1 | -2.84 | 0.55 | 0.56 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 12684 | 1602 | 11 | 0 | 10 | 0 | 0 | logfile |
✔ | 6HE5 | 0210 | 2022-05-15 | 2018-08-20 | 4.12 | 4.16 | — | 4.2 | 0.036 | 3.51 | 183.0 | 0.20 | 17.65 | 0.03 | 2.236 | 2.09 | 4.51 | 5.3 | 92.5 | 2.2 | -2.68 | 0.54 | 0.60 | — | 4.1 | 0.005 | 0.90 | 0.0 | 0.05 | 14.68 | 0.01 | 2.105 | 21.82 | 0.04 | 4.5 | 95.3 | 0.2 | -0.71 | 1.74 | 0.57 | 0.75 | — | 24633 | 3162 | 20 | 0 | 0 | 0 | 0 | logfile |
✔ | 6HE7 | 0211 | 2022-05-15 | 2018-08-20 | 3.69 | 3.80 | — | 3.8 | 0.039 | 3.60 | 213.0 | 0.21 | 17.65 | 0.03 | 2.081 | 3.03 | 4.93 | 5.6 | 92.9 | 1.6 | -2.44 | 0.64 | 0.70 | 2.28 | 3.8 | 0.012 | 0.89 | 0.0 | 0.05 | 17.48 | 0.00 | 1.904 | 14.13 | 0.16 | 3.1 | 96.8 | 0.1 | -0.09 | 0.88 | 0.63 | 0.78 | 1.62 | 23821 | 3059 | 14 | 0 | 0 | 0 | 0 | logfile |
✔ | 6HiN | 0225 | 2022-05-13 | 2018-08-30 | 4.1 | 4.24 | — | 4.2 | 0.009 | 1.18 | 0.0 | 0.07 | 11.83 | 0.01 | 2.367 | 6.61 | 0.32 | 1.5 | 98.5 | 0.0 | -4.98 | 0.81 | 0.83 | — | 4.1 | 0.003 | 0.75 | 0.0 | 0.05 | 12.11 | 0.00 | 2.208 | 13.61 | 0.00 | 3.2 | 96.8 | 0.0 | -2.21 | 0.72 | 0.82 | 0.82 | — | 14220 | 1675 | 10 | 0 | 30 | 0 | 0 | logfile |
✔ | 6Hio | 0226 | 2022-05-14 | 2018-08-30 | 4.2 | 4.49 | — | 4.2 | 0.009 | 1.15 | 0.0 | 0.06 | 11.28 | 0.01 | 2.185 | 8.32 | 0.29 | 1.9 | 98.1 | 0.0 | -3.81 | 0.89 | 0.85 | — | 4.2 | 0.003 | 0.66 | 0.0 | 0.04 | 11.24 | 0.00 | 2.169 | 9.82 | 0.06 | 2.5 | 97.5 | 0.0 | -0.61 | 0.65 | 0.88 | 0.84 | — | 16085 | 1925 | 10 | 0 | 30 | 0 | 0 | logfile |
✔ | 6HiQ | 0227 | 2022-05-14 | 2018-08-30 | 3.2 | 3.35 | — | 3.3 | 0.006 | 1.08 | 0.0 | 0.06 | 9.90 | 0.01 | 2.319 | 4.20 | 0.29 | 1.6 | 98.4 | 0.0 | -4.97 | 0.82 | 0.84 | 3.78 | 3.3 | 0.004 | 0.71 | 0.0 | 0.04 | 13.35 | 0.01 | 2.194 | 5.64 | 0.29 | 2.9 | 97.1 | 0.0 | -0.06 | 1.29 | 0.84 | 0.86 | 3.18 | 16110 | 1925 | 10 | 0 | 30 | 0 | 0 | logfile |
✔ | 6HiS | 0228 | 2022-05-14 | 2018-08-30 | 4.5 | 4.60 | — | 4.5 | 0.010 | 1.55 | 0.0 | 0.08 | 11.89 | 0.01 | 2.228 | 16.80 | 0.29 | 4.9 | 95.1 | 0.0 | -2.60 | 0.76 | 0.77 | — | 4.5 | 0.003 | 0.74 | 0.0 | 0.05 | 12.92 | 0.00 | 2.077 | 14.41 | 0.00 | 5.6 | 94.4 | 0.0 | -0.50 | 1.36 | 0.77 | 0.78 | — | 16240 | 1935 | 10 | 0 | 40 | 0 | 0 | logfile |
✔ | 6HiX | 0231 | 2022-05-16 | 2018-08-31 | 3.39 | 3.49 | 3.39 | 3.4 | 0.008 | 1.31 | 12.0 | 0.05 | 14.85 | 0.01 | 1.582 | 14.43 | 4.18 | 4.5 | 95.2 | 0.3 | -3.09 | 0.84 | 0.82 | 2.30 | 3.4 | 0.003 | 0.69 | 0.0 | 0.04 | 16.95 | 0.01 | 1.985 | 12.82 | 0.41 | 5.2 | 94.7 | 0.1 | -0.10 | 0.78 | 0.87 | 0.86 | 2.10 | 133849 | 14850 | 98 | 591 | 477 | 0 | 0 | logfile |
✔ | 6HiY | 0232 | 2022-05-17 | 2018-08-31 | 3.27 | 3.35 | 3.30 | 3.3 | 0.008 | 1.23 | 3.0 | 0.05 | 16.68 | 0.01 | 1.653 | 13.17 | 7.79 | 3.7 | 96.0 | 0.2 | -2.97 | 0.87 | 0.87 | 2.46 | 3.3 | 0.007 | 0.74 | 1.0 | 0.04 | 17.16 | 0.01 | 1.860 | 12.36 | 0.48 | 5.0 | 94.9 | 0.1 | 0.02 | 2.06 | 0.87 | 0.87 | 2.35 | 100780 | 10991 | 49 | 478 | 181 | 0 | 0 | logfile |
✔ | 6HiZ | 0233 | 2022-05-15 | 2018-08-31 | 3.08 | 3.20 | 3.05 | 3.1 | 0.009 | 1.39 | 0.0 | 0.06 | 18.06 | 0.01 | 1.866 | 11.28 | 12.80 | 3.2 | 96.7 | 0.1 | -2.90 | 0.89 | 0.91 | 2.63 | 3.1 | 0.002 | 0.56 | 0.0 | 0.04 | 16.90 | 0.00 | 1.966 | 8.31 | 0.20 | 3.2 | 96.7 | 0.0 | 1.36 | 0.78 | 0.87 | 0.89 | 2.58 | 76845 | 9056 | 33 | 143 | 19 | 3 | 0 | logfile |
✔ | 6HJN | 0234 | 2022-05-13 | 2018-09-04 | 3.3 | 3.88 | 3.28 | 3.6 | 0.008 | 1.23 | 3.0 | 0.11 | 11.99 | 0.02 | 1.734 | 5.16 | 2.80 | 8.9 | 91.1 | 0.0 | -3.22 | 0.91 | 0.91 | 4.09 | 3.6 | 0.004 | 0.66 | 0.0 | 0.04 | 13.45 | 0.00 | 2.090 | 6.53 | 0.31 | 9.0 | 91.0 | 0.0 | -0.32 | 0.54 | 0.89 | 0.90 | 3.41 | 12309 | 1488 | 12 | 0 | 48 | 0 | 0 | logfile |
✔ | 6HJP | 0235 | 2022-05-14 | 2018-09-04 | 3.3 | 3.74 | 3.29 | 3.5 | 0.008 | 1.15 | 9.0 | 0.09 | 11.50 | 0.02 | 2.158 | 3.98 | 2.40 | 7.9 | 91.9 | 0.2 | -2.34 | 0.88 | 0.90 | 3.43 | 3.5 | 0.003 | 0.62 | 0.0 | 0.04 | 13.64 | 0.00 | 2.076 | 6.47 | 0.25 | 4.7 | 95.3 | 0.0 | 0.15 | 0.62 | 0.87 | 0.89 | 2.77 | 22134 | 2784 | 18 | 0 | 51 | 0 | 0 | logfile |
✔ | 6HJQ | 0236 | 2022-05-15 | 2018-09-04 | 4.1 | 4.38 | 4.03 | 4.1 | 0.005 | 0.91 | 0.0 | 0.06 | 10.01 | 0.01 | 1.406 | 5.06 | 0.13 | 5.6 | 94.3 | 0.1 | -3.06 | 0.83 | 0.87 | — | 4.1 | 0.004 | 0.64 | 0.0 | 0.04 | 11.22 | 0.00 | 1.971 | 9.97 | 0.00 | 5.7 | 94.3 | 0.0 | -0.31 | 1.65 | 0.83 | 0.87 | — | 22530 | 2871 | 18 | 0 | 42 | 0 | 0 | logfile |
✔ | 6HJR | 0237 | 2022-05-13 | 2018-09-04 | 4.2 | 4.57 | 4.24 | 4.3 | 0.009 | 1.10 | 0.0 | 0.06 | 11.09 | 0.01 | 2.200 | 6.70 | 0.70 | 10.6 | 89.2 | 0.2 | -3.38 | 0.84 | 0.88 | — | 4.3 | 0.003 | 0.63 | 0.0 | 0.04 | 11.86 | 0.00 | 2.099 | 10.11 | 0.00 | 7.9 | 92.0 | 0.1 | -0.82 | 0.59 | 0.83 | 0.87 | — | 12579 | 1578 | 12 | 0 | 31 | 0 | 0 | logfile |
✔ | 6HKo | 0238 | 2022-05-16 | 2018-09-07 | 3.42 | 3.56 | — | 3.5 | 0.006 | 0.90 | 0.0 | 0.06 | 11.98 | 0.01 | 1.761 | 5.38 | 0.14 | 5.6 | 94.4 | 0.0 | -4.42 | 0.73 | 0.83 | 3.57 | 3.5 | 0.004 | 0.77 | 0.0 | 0.04 | 16.00 | 0.00 | 1.943 | 12.12 | 0.24 | 4.3 | 95.7 | 0.0 | -1.09 | 1.29 | 0.74 | 0.86 | 2.91 | 34518 | 4154 | 23 | 73 | 8 | 0 | 0 | logfile |