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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 6HJP | 0235 | 2022-12-14 | 2018-09-04 | 3.3 | 3.74 | 3.29 | 3.5 | 0.008 | 1.15 | 9.0 | 0.09 | 11.50 | 0.02 | 2.158 | 3.98 | 2.40 | 7.9 | 91.9 | 0.2 | -2.34 | 0.88 | 0.90 | 3.43 | 3.5 | 0.003 | 0.64 | 0.0 | 0.04 | 13.58 | 0.00 | 2.081 | 6.72 | 0.25 | 5.0 | 95.0 | 0.0 | -0.03 | 0.63 | 0.87 | 0.89 | 2.87 | 22134 | 2784 | 30 | 0 | 51 | 0 | 0 | logfile |
✔ | 6HJQ | 0236 | 2022-12-14 | 2018-09-04 | 4.1 | 4.38 | 4.03 | 4.1 | 0.005 | 0.91 | 0.0 | 0.06 | 10.01 | 0.01 | 1.406 | 5.06 | 0.13 | 5.6 | 94.3 | 0.1 | -3.06 | 0.83 | 0.87 | — | 4.1 | 0.004 | 0.64 | 0.0 | 0.04 | 11.22 | 0.00 | 1.971 | 9.97 | 0.00 | 5.7 | 94.3 | 0.0 | -0.31 | 1.65 | 0.83 | 0.87 | — | 22530 | 2871 | 27 | 0 | 42 | 0 | 0 | logfile |
✔ | 6HJR | 0237 | 2022-12-12 | 2018-09-04 | 4.2 | 4.57 | 4.24 | 4.3 | 0.009 | 1.10 | 0.0 | 0.06 | 11.09 | 0.01 | 2.200 | 6.70 | 0.70 | 10.6 | 89.2 | 0.2 | -3.38 | 0.84 | 0.88 | — | 4.3 | 0.003 | 0.62 | 0.0 | 0.04 | 11.92 | 0.00 | 2.087 | 10.19 | 0.00 | 7.6 | 92.3 | 0.1 | -0.88 | 0.59 | 0.83 | 0.87 | — | 12579 | 1578 | 19 | 0 | 31 | 0 | 0 | logfile |
✔ | 6HKo | 0238 | 2022-12-19 | 2018-09-07 | 3.42 | 3.56 | — | 3.5 | 0.006 | 0.90 | 0.0 | 0.06 | 11.98 | 0.01 | 1.761 | 5.38 | 0.14 | 5.6 | 94.4 | 0.0 | -4.42 | 0.73 | 0.83 | 3.57 | 3.5 | 0.007 | 0.73 | 0.0 | 0.05 | 16.21 | 0.00 | 1.884 | 12.36 | 0.68 | 5.5 | 94.5 | 0.0 | -0.97 | 1.29 | 0.74 | 0.87 | 2.99 | 34518 | 4154 | 23 | 73 | 8 | 0 | 0 | logfile |
✔ | 6HLQ | 0239 | 2022-12-18 | 2018-09-11 | 3.18 | 3.18 | — | 3.2 | 0.006 | 0.90 | 0.0 | 0.06 | 12.11 | 0.01 | 1.742 | 5.25 | 0.09 | 4.6 | 95.4 | 0.0 | -4.49 | 0.68 | 0.82 | 4.22 | 3.1 | 0.004 | 0.64 | 0.0 | 0.04 | 16.51 | 0.00 | 1.956 | 9.16 | 0.43 | 3.8 | 96.2 | 0.0 | -0.71 | 0.71 | 0.69 | 0.87 | 3.59 | 32731 | 3926 | 22 | 73 | 9 | 0 | 0 | logfile |
✔ | 6HLR | 0240 | 2022-12-16 | 2018-09-11 | 3.18 | 3.30 | — | 3.3 | 0.007 | 0.95 | 0.0 | 0.06 | 12.28 | 0.01 | 1.734 | 4.76 | 0.15 | 4.9 | 95.1 | 0.0 | -4.37 | 0.70 | 0.84 | 4.14 | 3.2 | 0.005 | 0.67 | 0.0 | 0.04 | 16.23 | 0.00 | 1.968 | 9.56 | 0.47 | 3.7 | 96.3 | 0.0 | -0.37 | 1.64 | 0.72 | 0.87 | 3.30 | 32370 | 3881 | 21 | 73 | 8 | 0 | 0 | logfile |
✔ | 6HLS | 0241 | 2022-12-16 | 2018-09-11 | 3.21 | 3.27 | — | 3.3 | 0.007 | 0.94 | 0.0 | 0.06 | 10.21 | 0.01 | 2.231 | 5.19 | 0.32 | 5.4 | 94.6 | 0.0 | -4.54 | 0.64 | 0.82 | 4.01 | 3.2 | 0.003 | 0.63 | 0.0 | 0.04 | 15.03 | 0.00 | 2.091 | 9.11 | 0.26 | 3.5 | 96.5 | 0.0 | -0.81 | 1.64 | 0.66 | 0.85 | 2.95 | 30954 | 3896 | 17 | 0 | 7 | 0 | 0 | logfile |
✔ | 6HMA | 0243 | 2022-12-16 | 2018-09-12 | 2.65 | 2.72 | 2.61 | 2.7 | 0.012 | 1.00 | 0.0 | 0.06 | 13.74 | 0.01 | 1.546 | 2.32 | 0.00 | 7.3 | 92.7 | 0.0 | -4.23 | 0.49 | 0.72 | 4.01 | 2.7 | 0.008 | 0.84 | 0.0 | 0.04 | 15.44 | 0.01 | 1.841 | 5.24 | 5.00 | 6.7 | 93.3 | 0.0 | -1.60 | 1.30 | 0.71 | 0.87 | 3.50 | 86401 | 3039 | 36 | 2949 | 237 | 0 | 0 | logfile |
✔ | 6HN4 | 0246 | 2022-12-11 | 2018-09-14 | 4.2 | 4.43 | — | 4.1 | 0.007 | 1.49 | 2.0 | 0.07 | 9.72 | 0.01 | 2.187 | 6.45 | 0.00 | 6.9 | 91.4 | 1.8 | -2.18 | 0.73 | 0.70 | — | 4.2 | 0.003 | 0.71 | 0.0 | 0.05 | 12.01 | 0.00 | 2.115 | 13.89 | 0.00 | 6.7 | 93.3 | 0.0 | 0.00 | 1.13 | 0.76 | 0.77 | — | 5702 | 700 | 2 | 0 | 6 | 0 | 0 | logfile |
✔ | 6HN5 | 0247 | 2022-12-11 | 2018-09-14 | 3.2 | 3.48 | — | 3.3 | 0.012 | 1.19 | 0.0 | 0.07 | 9.71 | 0.01 | 2.281 | 7.43 | 0.12 | 10.8 | 89.2 | 0.0 | -3.94 | 0.76 | 0.77 | 3.25 | 3.3 | 0.003 | 0.67 | 0.0 | 0.05 | 13.00 | 0.00 | 2.185 | 10.73 | 0.12 | 7.9 | 92.1 | 0.0 | -2.14 | 0.77 | 0.79 | 0.80 | 2.43 | 7869 | 953 | 7 | 0 | 11 | 0 | 0 | logfile |
✔ | 6HQE | 0252 | 2022-12-12 | 2018-09-24 | 4.4 | 4.34 | — | 4.4 | 0.009 | 1.25 | 0.0 | 0.06 | 9.67 | 0.01 | 2.307 | 6.79 | 0.00 | 4.8 | 95.2 | 0.0 | -7.05 | 0.65 | 0.85 | — | 4.4 | 0.004 | 0.74 | 0.0 | 0.04 | 12.12 | 0.01 | 2.264 | 19.28 | 0.00 | 2.6 | 97.4 | 0.0 | 1.06 | 1.03 | 0.65 | 0.84 | — | 9360 | 1196 | 52 | 0 | 0 | 0 | 0 | logfile |
✔ | 6HRA | 0257 | 2022-12-12 | 2018-09-26 | 3.7 | 3.89 | 3.68 | 3.8 | 0.007 | 0.93 | 0.0 | 0.05 | 9.85 | 0.01 | 2.227 | 6.68 | 0.18 | 7.4 | 92.6 | 0.0 | -5.34 | 0.70 | 0.83 | 2.52 | 3.8 | 0.003 | 0.70 | 0.0 | 0.04 | 13.96 | 0.00 | 2.104 | 13.32 | 0.53 | 4.8 | 95.2 | 0.0 | -0.87 | 1.64 | 0.71 | 0.84 | 1.48 | 10818 | 1450 | 5 | 0 | 3 | 0 | 0 | logfile |
✔ | 6HRB | 0258 | 2022-12-12 | 2018-09-26 | 4.0 | 4.20 | 3.96 | 4.0 | 0.008 | 0.96 | 0.0 | 0.05 | 9.28 | 0.01 | 2.186 | 6.75 | 0.26 | 7.2 | 92.8 | 0.0 | -4.97 | 0.74 | 0.84 | — | 4.0 | 0.004 | 0.74 | 0.0 | 0.04 | 13.42 | 0.00 | 2.038 | 15.24 | 0.35 | 4.0 | 96.0 | 0.0 | -0.11 | 1.27 | 0.74 | 0.84 | — | 10787 | 1447 | 5 | 0 | 1 | 0 | 0 | logfile |
✔ | 6HRE | 0259 | 2022-12-11 | 2018-09-26 | 3.2 | 2.74 | 2.87 | 3.3 | 0.019 | 1.47 | 0.0 | 0.11 | 13.34 | 0.01 | 2.474 | 6.57 | 0.00 | 12.0 | 88.0 | 0.0 | -4.17 | 0.32 | 0.80 | 4.40 | 2.8 | 0.007 | 0.94 | 0.0 | 0.05 | 17.28 | 0.00 | 2.123 | 9.50 | 0.50 | 9.3 | 90.7 | 0.0 | -3.49 | 0.81 | 0.29 | 0.78 | 3.87 | 3522 | 462 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 6HRF | 0260 | 2022-12-11 | 2018-09-26 | 3.3 | 3.38 | 2.95 | 3.5 | 0.016 | 1.25 | 0.0 | 0.09 | 13.68 | 0.01 | 2.627 | 8.66 | 0.00 | 13.3 | 86.7 | 0.0 | -4.08 | 0.38 | 0.74 | 2.93 | 3.5 | 0.005 | 0.84 | 0.0 | 0.05 | 16.58 | 0.00 | 2.181 | 9.08 | 0.25 | 6.7 | 93.3 | 0.0 | -3.41 | 3.72 | 0.37 | 0.78 | 3.35 | 3522 | 462 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 6HS7 | 0264 | 2022-12-11 | 2018-09-28 | 4.6 | 3.02 | 4.27 | 4.3 | 0.006 | 1.00 | 1.0 | 0.05 | 14.59 | 0.01 | 2.156 | 6.43 | 0.04 | 10.5 | 89.5 | 0.0 | -5.02 | 0.77 | 0.69 | — | 4.3 | 0.003 | 0.72 | 0.0 | 0.04 | 14.07 | 0.00 | 2.125 | 10.42 | 0.05 | 7.9 | 92.1 | 0.0 | -2.28 | 0.94 | 0.79 | 0.71 | — | 52890 | 6905 | 25 | 0 | 0 | 0 | 0 | logfile |
✔ | 6HU7 | 0273 | 2022-12-11 | 2018-10-05 | 2.8 | 2.82 | 2.83 | 2.9 | 0.008 | 0.78 | 0.0 | 0.05 | 9.81 | 0.01 | 2.130 | 10.36 | 0.36 | 2.7 | 96.8 | 0.5 | -3.47 | 0.49 | 0.84 | 4.61 | 2.9 | 0.003 | 0.61 | 0.0 | 0.04 | 15.35 | 0.00 | 2.300 | 8.62 | 1.46 | 2.5 | 97.1 | 0.3 | 2.87 | 1.61 | 0.53 | 0.87 | 3.50 | 4890 | 609 | 7 | 0 | 0 | 0 | 0 | logfile |
✔ | 6HUD | 0274 | 2022-12-11 | 2018-10-06 | 4.0 | 4.06 | — | 4.3 | 0.007 | 1.12 | 0.0 | 0.07 | 8.28 | 0.01 | 2.216 | 6.89 | 0.00 | 8.2 | 91.8 | 0.0 | -5.06 | 0.59 | 0.76 | — | 4.3 | 0.006 | 0.86 | 0.0 | 0.05 | 13.22 | 0.00 | 2.169 | 25.57 | 0.61 | 11.8 | 88.2 | 0.0 | -5.00 | 1.50 | 0.60 | 0.80 | — | 2905 | 385 | 5 | 0 | 0 | 0 | 0 | logfile |
✔ | 6HUJ | 0279 | 2022-12-13 | 2018-10-08 | 3.04 | 3.16 | 3.04 | 3.1 | 0.005 | 0.86 | 0.0 | 0.06 | 8.77 | 0.01 | 2.265 | 4.71 | 0.00 | 4.0 | 96.0 | 0.0 | -4.37 | 0.76 | 0.83 | 4.82 | 3.1 | 0.003 | 0.57 | 0.0 | 0.04 | 13.90 | 0.00 | 2.161 | 7.68 | 0.25 | 3.0 | 97.0 | 0.0 | 0.06 | 0.67 | 0.76 | 0.86 | 4.11 | 15255 | 1812 | 15 | 0 | 35 | 0 | 0 | logfile |
✔ | 6HUK | 0280 | 2022-12-13 | 2018-10-08 | 3.69 | 3.75 | 3.64 | 3.7 | 0.006 | 1.03 | 0.0 | 0.06 | 9.57 | 0.01 | 2.222 | 5.10 | 0.00 | 4.0 | 96.0 | 0.0 | -3.20 | 0.71 | 0.82 | 3.81 | 3.7 | 0.003 | 0.63 | 0.0 | 0.04 | 14.38 | 0.00 | 2.164 | 11.05 | 0.37 | 3.0 | 97.0 | 0.0 | -0.17 | 0.80 | 0.73 | 0.84 | 3.28 | 15300 | 1815 | 16 | 0 | 34 | 0 | 0 | logfile |