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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 6o1o | 0454 | 2023-04-23 | 2019-02-21 | 3.8 | 4.00 | — | 3.6 | 0.008 | 1.55 | 0.0 | 0.07 | 15.00 | 0.01 | 2.295 | 4.58 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.72 | 0.70 | — | 3.6 | 0.013 | 1.77 | 0.0 | 0.07 | 13.79 | 0.00 | 1.993 | 31.58 | 0.00 | 0.0 | 0.0 | 0.0 | — | 1.70 | 0.78 | 0.76 | — | 15193 | 0 | 14 | 66 | 2757 | 0 | 0 | logfile |
✔ | 6NN6 | 0458 | 2023-04-23 | 2019-01-14 | 3.9 | 3.97 | — | 3.8 | 0.010 | 1.02 | 0.0 | 0.05 | 25.83 | 0.01 | 2.144 | 9.01 | 0.81 | 3.8 | 96.0 | 0.2 | -5.04 | 0.83 | 0.80 | 2.90 | 3.8 | 0.003 | 0.63 | 0.0 | 0.04 | 26.56 | 0.00 | 2.077 | 11.67 | 0.61 | 3.5 | 96.5 | 0.0 | 0.41 | 1.77 | 0.82 | 0.78 | 1.35 | 15125 | 1149 | 12 | 290 | 0 | 0 | 0 | logfile |
✔ | 6NoG | 0468 | 2023-04-25 | 2019-01-16 | 3.9 | 4.05 | 4.50 | 3.9 | 0.009 | 1.12 | 1.0 | 0.06 | 26.55 | 0.01 | 2.239 | 6.27 | 0.84 | 4.1 | 95.9 | 0.0 | -1.83 | 0.84 | 0.81 | 0.53 | 3.9 | 0.004 | 0.63 | 0.0 | 0.03 | 26.62 | 0.00 | 2.153 | 11.24 | 0.32 | 2.2 | 97.8 | 0.0 | 1.84 | 1.76 | 0.86 | 0.85 | 0.51 | 14929 | 1124 | 12 | 292 | 0 | 0 | 0 | logfile |
✔ | 6NP0 | 0469 | 2023-04-24 | 2019-01-17 | 2.92 | 3.16 | 3.01 | 3.1 | 0.011 | 1.29 | 0.0 | 0.08 | 10.43 | 0.01 | 2.270 | 3.63 | 0.55 | 5.2 | 94.8 | 0.0 | -3.90 | 0.69 | 0.72 | 2.76 | 3.1 | 0.003 | 0.65 | 0.0 | 0.04 | 14.69 | 0.00 | 2.224 | 5.64 | 3.29 | 2.7 | 97.3 | 0.0 | 0.36 | 0.84 | 0.79 | 0.85 | 2.73 | 16891 | 1975 | 20 | 0 | 41 | 0 | 0 | logfile |
✔ | 6NPH | 0470 | 2023-04-20 | 2019-01-17 | 2.9 | 3.11 | — | 3.2 | 0.012 | 1.42 | 0.0 | 0.06 | 17.82 | 0.01 | 2.292 | 5.02 | 4.67 | 7.9 | 92.1 | 0.0 | -4.29 | 0.53 | 0.71 | 1.66 | 3.2 | 0.004 | 0.66 | 0.0 | 0.04 | 17.40 | 0.00 | 2.224 | 6.39 | 2.27 | 6.8 | 93.2 | 0.0 | -0.33 | 0.92 | 0.59 | 0.84 | 2.98 | 7504 | 944 | 4 | 0 | 13 | 0 | 0 | logfile |
✔ | 6NPJ | 0471 | 2023-04-20 | 2019-01-17 | 3.8 | 3.73 | — | 3.7 | 0.008 | 1.24 | 0.0 | 0.07 | 17.12 | 0.01 | 2.246 | 7.07 | 6.25 | 8.8 | 91.2 | 0.0 | -5.64 | 0.62 | 0.77 | 2.47 | 3.7 | 0.003 | 0.71 | 0.0 | 0.04 | 17.43 | 0.00 | 2.278 | 10.04 | 0.30 | 6.1 | 93.9 | 0.0 | -2.01 | 0.85 | 0.63 | 0.78 | 2.22 | 6186 | 768 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 6NPK | 0472 | 2023-04-20 | 2019-01-17 | 3.6 | 3.66 | — | 3.6 | 0.004 | 0.82 | 0.0 | 0.05 | 13.02 | 0.01 | 2.320 | 3.89 | 6.13 | 6.6 | 93.4 | 0.0 | -5.05 | 0.58 | 0.80 | 2.02 | 3.7 | 0.003 | 0.61 | 0.0 | 0.04 | 14.36 | 0.00 | 2.173 | 9.10 | 0.27 | 6.3 | 93.7 | 0.0 | 0.11 | 1.23 | 0.61 | 0.81 | 2.02 | 7134 | 944 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 6NPL | 0473 | 2023-04-23 | 2019-01-17 | 2.9 | 2.52 | — | 3.0 | 0.009 | 1.18 | 0.0 | 0.05 | 16.97 | 0.01 | 2.264 | 4.08 | 7.67 | 8.5 | 91.5 | 0.1 | -4.62 | 0.70 | 0.70 | 1.19 | 3.0 | 0.003 | 0.76 | 0.0 | 0.04 | 16.90 | 0.00 | 2.232 | 10.59 | 3.14 | 7.2 | 92.8 | 0.0 | -0.50 | 1.03 | 0.78 | 0.86 | 2.48 | 13774 | 1722 | 4 | 0 | 13 | 0 | 0 | logfile |
✔ | 6NPY | 0476 | 2023-04-20 | 2019-01-18 | 3.8 | 4.03 | — | 3.8 | 0.006 | 1.16 | 0.0 | 0.06 | 16.44 | 0.01 | 2.244 | 8.58 | 0.84 | 14.6 | 85.3 | 0.1 | -4.90 | 0.79 | 0.71 | 0.51 | 3.8 | 0.003 | 0.91 | 0.0 | 0.05 | 17.24 | 0.00 | 2.196 | 17.36 | 0.60 | 10.2 | 89.8 | 0.0 | -2.29 | 1.10 | 0.78 | 0.70 | 0.72 | 7586 | 965 | 3 | 0 | 1 | 0 | 0 | logfile |
✘ | 6NQ0 | 0477 | 2023-04-21 | 2019-01-18 | 3.7 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 10140 | 1242 | 4 | 0 | 2 | 0 | 0 | logfile |
✔ | 6NQ1 | 0478 | 2023-04-21 | 2019-01-18 | 3.5 | 3.57 | — | 3.5 | 0.008 | 0.97 | 0.0 | 0.06 | 14.33 | 0.01 | 2.298 | 3.78 | 0.18 | 5.2 | 94.8 | 0.0 | -5.53 | 0.59 | 0.82 | 3.36 | 3.5 | 0.003 | 0.70 | 0.0 | 0.04 | 15.93 | 0.00 | 2.048 | 9.83 | 0.18 | 5.2 | 94.8 | 0.0 | 0.85 | 1.28 | 0.58 | 0.82 | 1.92 | 10046 | 1242 | 2 | 0 | 0 | 0 | 0 | logfile |
✘ | 6NQ2 | 0479 | 2023-04-21 | 2019-01-18 | 3.4 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 10140 | 1242 | 4 | 0 | 2 | 0 | 0 | logfile |
✔ | 6NQD | 0485 | 2023-04-25 | 2019-01-21 | 3.9 | 3.97 | — | 3.9 | 0.012 | 1.40 | 0.0 | 0.09 | 13.92 | 0.01 | 2.213 | 14.68 | 8.15 | 10.9 | 88.3 | 0.8 | -3.70 | 0.62 | 0.76 | 2.65 | 3.9 | 0.004 | 0.84 | 0.0 | 0.05 | 15.77 | 0.00 | 2.094 | 17.83 | 0.87 | 8.6 | 91.4 | 0.0 | -1.68 | 1.21 | 0.62 | 0.77 | 1.42 | 20175 | 2403 | 54 | 0 | 141 | 0 | 0 | logfile |
✔ | 6NR2 | 0487 | 2023-04-27 | 2019-01-22 | 4.0 | 4.24 | 3.95 | 4.1 | 0.007 | 0.98 | 0.0 | 0.05 | 10.05 | 0.01 | 2.256 | 5.92 | 0.17 | 4.1 | 95.9 | 0.0 | -2.86 | 0.68 | 0.81 | — | 4.1 | 0.003 | 0.62 | 0.0 | 0.04 | 14.45 | 0.00 | 2.257 | 7.03 | 0.43 | 4.8 | 95.2 | 0.0 | 1.57 | 1.30 | 0.68 | 0.82 | — | 25788 | 3256 | 8 | 0 | 188 | 0 | 0 | logfile |
✘ | 6NR3 | 0488 | 2023-04-27 | 2019-01-22 | 3.4 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 25180 | 3232 | 8 | 0 | 196 | 0 | 0 | logfile |
✔ | 6NR4 | 0489 | 2023-04-26 | 2019-01-22 | 4.3 | 4.39 | 4.24 | 4.3 | 0.006 | 0.93 | 0.0 | 0.05 | 9.96 | 0.01 | 2.319 | 3.34 | 0.39 | 4.7 | 95.3 | 0.0 | -3.24 | 0.60 | 0.77 | — | 4.3 | 0.002 | 0.58 | 0.0 | 0.04 | 11.99 | 0.00 | 2.161 | 7.21 | 0.00 | 4.2 | 95.8 | 0.0 | 2.17 | 0.79 | 0.60 | 0.78 | — | 23264 | 3036 | 4 | 0 | 180 | 0 | 0 | logfile |
✔ | 6NSJ | 0498 | 2023-04-21 | 2019-01-24 | 2.7 | 3.69 | 2.67 | 3.6 | 0.008 | 1.12 | 0.0 | 0.06 | 13.77 | 0.01 | 2.340 | 8.25 | 2.18 | 6.0 | 94.0 | 0.0 | -4.40 | 0.61 | 0.75 | 5.00 | 3.6 | 0.003 | 0.59 | 0.0 | 0.04 | 14.04 | 0.00 | 2.234 | 5.27 | 1.09 | 4.0 | 96.0 | 0.0 | 2.26 | 0.53 | 0.58 | 0.75 | 2.91 | 9096 | 1092 | 12 | 0 | 18 | 0 | 0 | logfile |
✔ | 6NSK | 0499 | 2023-04-21 | 2019-01-24 | 2.7 | 2.82 | 2.55 | 3.1 | 0.009 | 1.11 | 0.0 | 0.06 | 14.42 | 0.01 | 2.213 | 4.78 | 0.00 | 3.6 | 96.4 | 0.0 | -3.23 | 0.62 | 0.77 | 5.14 | 3.1 | 0.003 | 0.58 | 0.0 | 0.04 | 14.68 | 0.00 | 2.265 | 5.59 | 1.74 | 3.7 | 96.3 | 0.0 | 2.52 | 0.42 | 0.65 | 0.82 | 3.62 | 9096 | 1092 | 12 | 0 | 18 | 0 | 0 | logfile |
✘ | 6NT3 | 0500 | 2023-04-21 | 2019-01-28 | 3.4 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 10934 | 1278 | 5 | 0 | 20 | 0 | 0 | logfile |
✘ | 6NT4 | 0501 | 2023-04-22 | 2019-01-28 | 3.5 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 11924 | 1406 | 5 | 0 | 20 | 0 | 0 | logfile |