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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✘ | 6HWH | 0289 | 2024-03-24 | 2018-10-12 | 3.3 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 40632 | 4916 | 40 | 0 | 420 | 0 | 0 | logfile |
✔ | 6HXZ | 0298 | 2024-03-22 | 2018-10-18 | 4.1 | 4.12 | 3.30 | 4.1 | 0.008 | 1.04 | 0.0 | 0.06 | 11.58 | 0.01 | 2.476 | 0.35 | 1.95 | 13.3 | 86.7 | 0.0 | -5.83 | 0.63 | 0.83 | — | 4.1 | 0.004 | 0.80 | 0.0 | 0.05 | 13.30 | 0.00 | 2.155 | 9.58 | 0.00 | 9.8 | 90.2 | 0.0 | -2.38 | 0.90 | 0.64 | 0.83 | — | 34008 | 4224 | 24 | 0 | 0 | 0 | 0 | logfile |
✔ | 6HYD | 0308 | 2024-03-15 | 2018-10-19 | 3.9 | 4.01 | — | 4.0 | 0.004 | 0.85 | 0.0 | 0.05 | 9.33 | 0.01 | 2.319 | 2.63 | 0.24 | 5.7 | 94.0 | 0.3 | -6.69 | 0.74 | 0.77 | 2.59 | 3.9 | 0.004 | 0.69 | 0.0 | 0.04 | 14.74 | 0.00 | 2.155 | 5.43 | 3.61 | 6.4 | 93.4 | 0.2 | -1.27 | 1.74 | 0.76 | 0.79 | 1.67 | 12168 | 1543 | 1 | 0 | 31 | 0 | 0 | logfile |
✔ | 6HYP | 0309 | 2024-03-15 | 2018-10-22 | 4.4 | 4.53 | — | 4.4 | 0.003 | 0.72 | 0.0 | 0.05 | 8.72 | 0.00 | 1.943 | 1.67 | 0.34 | 7.3 | 92.2 | 0.4 | -5.99 | 0.75 | 0.69 | — | 4.4 | 0.003 | 0.71 | 0.0 | 0.04 | 8.65 | 0.00 | 2.059 | 4.42 | 0.00 | 11.5 | 88.3 | 0.2 | -1.34 | 0.64 | 0.77 | 0.74 | — | 12392 | 2082 | 1 | 0 | 192 | 0 | 0 | logfile |
✔ | 6HZ4 | 0310 | 2024-03-23 | 2018-10-22 | 3.6 | 3.69 | 3.54 | 3.7 | 0.013 | 1.08 | 0.0 | 0.06 | 15.02 | 0.01 | 1.969 | 3.49 | 1.15 | 2.8 | 97.2 | 0.0 | -0.49 | 0.74 | 0.78 | 2.72 | 3.6 | 0.003 | 0.57 | 0.0 | 0.04 | 17.09 | 0.00 | 1.893 | 9.86 | 2.21 | 3.4 | 96.6 | 0.0 | 0.42 | 1.42 | 0.73 | 0.78 | 2.33 | 36308 | 2212 | 14 | 3 | 6 | 0 | 17933 | logfile |
✔ | 6i00 | 0320 | 2024-03-20 | 2018-10-24 | 3.4 | 3.52 | — | 3.5 | 0.010 | 1.58 | 25.0 | 0.11 | 11.84 | 0.02 | 2.285 | 7.12 | 2.72 | 16.2 | 83.0 | 0.7 | -5.33 | 0.58 | 0.91 | 4.26 | 3.5 | 0.003 | 0.68 | 0.0 | 0.05 | 15.67 | 0.00 | 2.181 | 7.34 | 4.22 | 11.6 | 88.0 | 0.4 | -2.67 | 3.46 | 0.57 | 0.89 | 2.66 | 26712 | 3468 | 12 | 0 | 0 | 0 | 0 | logfile |
✔ | 6i0Y | 0322 | 2024-03-19 | 2018-10-26 | 3.2 | 4.80 | — | 4.7 | 0.010 | 1.49 | 8.0 | 0.07 | 23.52 | 0.01 | 0.682 | 13.02 | 11.41 | 16.0 | 77.5 | 6.5 | -5.00 | 0.59 | 0.58 | 0.26 | 4.7 | 0.006 | 0.87 | 1.0 | 0.04 | 23.22 | 0.01 | 0.938 | 24.00 | 6.89 | 14.2 | 83.8 | 2.0 | -2.91 | 1.60 | 0.61 | 0.73 | 0.64 | 93619 | 3551 | 48 | 3049 | 144 | 439 | 0 | logfile |
✔ | 6i1X | 0326 | 2024-03-11 | 2018-10-30 | 3.7 | 3.83 | — | 3.8 | 0.013 | 1.81 | 34.0 | 0.10 | 14.94 | 0.01 | 0.458 | 50.06 | 4.35 | 7.5 | 90.6 | 1.9 | -3.51 | 0.50 | 0.32 | 0.28 | 3.8 | 0.003 | 0.77 | 0.0 | 0.05 | 16.50 | 0.00 | 2.113 | 17.73 | 2.99 | 3.9 | 95.9 | 0.3 | -1.11 | 1.03 | 0.65 | 0.61 | 0.90 | 54915 | 7290 | 15 | 0 | 0 | 0 | 0 | logfile |
✔ | 6i1Y | 0327 | 2024-03-11 | 2018-10-30 | 3.4 | 3.52 | — | 3.4 | 0.015 | 2.01 | 16.0 | 0.10 | 13.31 | 0.02 | 1.301 | 75.63 | 0.72 | 10.9 | 85.8 | 3.3 | -5.20 | 0.79 | 0.83 | 1.55 | 3.4 | 0.003 | 0.70 | 0.0 | 0.05 | 16.14 | 0.01 | 2.114 | 15.64 | 2.22 | 5.3 | 94.5 | 0.2 | -1.67 | 1.45 | 0.78 | 0.80 | 1.66 | 56520 | 7440 | 15 | 0 | 0 | 0 | 0 | logfile |
✔ | 6i26 | 0328 | 2024-03-19 | 2018-10-31 | 4.3 | 4.37 | — | 4.2 | 0.005 | 0.89 | 0.0 | 0.05 | 8.22 | 0.01 | 0.411 | 6.12 | 0.50 | 6.4 | 93.3 | 0.3 | -6.25 | 0.75 | 0.60 | — | 4.2 | 0.004 | 0.72 | 0.0 | 0.04 | 10.44 | 0.00 | 2.206 | 7.12 | 0.00 | 7.5 | 92.4 | 0.1 | -0.07 | 0.98 | 0.84 | 0.77 | — | 22765 | 3366 | 1 | 0 | 221 | 0 | 0 | logfile |
✔ | 6i2i | 0331 | 2024-03-11 | 2018-11-01 | 3.6 | 3.72 | — | 3.7 | 0.009 | 1.17 | 0.0 | 0.06 | 16.64 | 0.01 | 2.019 | 7.46 | 0.28 | 7.1 | 92.9 | 0.0 | -5.22 | 0.74 | 0.74 | 2.16 | 3.8 | 0.003 | 0.69 | 0.0 | 0.04 | 15.52 | 0.00 | 1.932 | 12.16 | 2.90 | 3.6 | 96.4 | 0.0 | -1.95 | 0.82 | 0.75 | 0.75 | 1.50 | 6830 | 856 | 4 | 0 | 5 | 0 | 0 | logfile |
✔ | 6i2N | 0333 | 2024-03-17 | 2018-11-01 | 3.3 | 3.45 | 3.33 | 3.4 | 0.007 | 0.97 | 0.0 | 0.05 | 11.93 | 0.01 | 2.323 | 2.82 | 0.00 | 6.0 | 94.0 | 0.0 | -3.81 | 0.75 | 0.79 | 2.55 | 3.4 | 0.002 | 0.57 | 0.0 | 0.04 | 15.23 | 0.00 | 2.121 | 8.36 | 2.50 | 4.6 | 95.4 | 0.0 | 0.74 | 2.26 | 0.77 | 0.84 | 1.86 | 18970 | 2352 | 14 | 21 | 0 | 0 | 0 | logfile |
✔ | 6N3C | 0334 | 2024-03-10 | 2018-11-14 | 3.3 | 3.53 | — | 3.5 | 0.009 | 1.31 | 0.0 | 0.07 | 14.00 | 0.00 | 2.387 | 18.47 | 0.00 | 11.5 | 88.5 | 0.0 | -5.01 | 0.52 | 0.83 | 4.06 | 3.5 | 0.004 | 0.68 | 0.0 | 0.04 | 15.51 | 0.00 | 2.342 | 12.19 | 10.00 | 9.0 | 91.0 | 0.0 | -3.81 | 1.15 | 0.54 | 0.84 | 4.24 | 4260 | 640 | 20 | 0 | 0 | 0 | 0 | logfile |
✔ | 6N3Q | 0336 | 2024-03-14 | 2018-11-16 | 3.68 | 4.01 | — | 4.0 | 0.006 | 1.03 | 0.0 | 0.05 | 10.91 | 0.01 | 2.308 | 4.48 | 0.67 | 3.2 | 96.8 | 0.0 | -3.32 | 0.63 | 0.78 | 2.20 | 4.0 | 0.006 | 0.82 | 0.0 | 0.04 | 15.56 | 0.00 | 2.059 | 14.09 | 5.09 | 4.7 | 95.3 | 0.0 | 0.91 | 2.70 | 0.69 | 0.82 | 1.85 | 9931 | 1290 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 6N4B | 0339 | 2024-03-11 | 2018-11-18 | 3.0 | 3.84 | — | 3.8 | 0.011 | 1.40 | 4.0 | 0.09 | 9.76 | 0.01 | 1.855 | 20.11 | 0.84 | 2.7 | 97.3 | 0.0 | -2.27 | 0.55 | 0.81 | 3.06 | 3.8 | 0.003 | 0.64 | 0.0 | 0.04 | 14.68 | 0.00 | 2.234 | 5.98 | 1.44 | 3.4 | 96.6 | 0.0 | -0.42 | 0.64 | 0.54 | 0.81 | 2.63 | 8453 | 1121 | 6 | 0 | 3 | 0 | 0 | logfile |
✔ | 6N4Q | 0341 | 2024-03-17 | 2018-11-20 | 3.6 | 4.01 | 3.86 | 4.0 | 0.008 | 1.03 | 0.0 | 0.06 | 10.17 | 0.01 | 2.288 | 3.98 | 0.11 | 7.9 | 92.1 | 0.0 | -3.41 | 0.57 | 0.73 | 1.48 | 4.0 | 0.004 | 0.74 | 0.0 | 0.04 | 14.94 | 0.00 | 2.069 | 10.80 | 3.37 | 6.6 | 93.4 | 0.0 | -0.53 | 0.81 | 0.59 | 0.75 | 1.16 | 16358 | 2052 | 12 | 0 | 0 | 0 | 0 | logfile |
✔ | 6N4R | 0342 | 2024-03-16 | 2018-11-20 | 4.2 | 4.09 | 4.16 | 4.1 | 0.008 | 1.07 | 0.0 | 0.06 | 10.26 | 0.01 | 2.222 | 4.60 | 0.23 | 6.8 | 93.2 | 0.0 | -3.27 | 0.66 | 0.76 | — | 4.1 | 0.003 | 0.69 | 0.0 | 0.04 | 12.54 | 0.00 | 2.163 | 10.37 | 0.00 | 5.8 | 94.2 | 0.0 | -0.61 | 0.82 | 0.63 | 0.76 | — | 15444 | 1942 | 12 | 0 | 0 | 0 | 0 | logfile |
✔ | 6N51 | 0345 | 2024-03-16 | 2018-11-20 | 4.0 | 4.15 | — | 4.0 | 0.006 | 0.84 | 0.0 | 0.05 | 9.68 | 0.01 | 2.274 | 5.73 | 0.00 | 6.8 | 93.2 | 0.0 | -3.65 | 0.71 | 0.81 | — | 4.0 | 0.003 | 0.73 | 0.0 | 0.04 | 13.98 | 0.00 | 2.119 | 14.34 | 3.04 | 5.3 | 94.7 | 0.0 | -0.68 | 1.42 | 0.72 | 0.82 | — | 14087 | 1830 | 6 | 0 | 6 | 0 | 0 | logfile |
✔ | 6N52 | 0346 | 2024-03-15 | 2018-11-20 | 4.0 | 4.42 | — | 3.9 | 0.004 | 0.70 | 0.0 | 0.05 | 8.65 | 0.01 | 2.328 | 4.22 | 0.00 | 4.1 | 95.9 | 0.0 | -4.16 | 0.72 | 0.78 | — | 3.9 | 0.004 | 0.67 | 0.0 | 0.04 | 11.50 | 0.00 | 2.196 | 11.33 | 0.78 | 5.9 | 94.1 | 0.0 | -0.41 | 1.60 | 0.73 | 0.81 | — | 11108 | 1548 | 4 | 0 | 4 | 0 | 0 | logfile |
✔ | 6N57 | 0348 | 2024-03-21 | 2018-11-21 | 3.7 | 3.83 | — | 3.8 | 0.012 | 1.14 | 3.0 | 0.06 | 10.44 | 0.01 | 1.366 | 39.05 | 0.37 | 15.4 | 84.0 | 0.6 | -4.55 | 0.75 | 0.82 | 2.12 | 3.8 | 0.003 | 0.68 | 0.0 | 0.04 | 15.47 | 0.00 | 2.139 | 11.81 | 3.06 | 7.7 | 92.1 | 0.2 | -1.13 | 2.03 | 0.73 | 0.81 | 1.39 | 30233 | 3841 | 11 | 0 | 8 | 0 | 0 | logfile |