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Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7V2A | 31639 | 2023-04-28 | 2021-08-07 | 3.4 | 3.63 | — | 3.5 | 0.011 | 0.96 | 5.0 | 0.06 | 15.25 | 0.01 | 1.059 | 25.66 | 2.50 | 9.5 | 90.2 | 0.3 | -3.95 | 0.82 | 0.84 | 2.51 | 3.5 | 0.003 | 0.67 | 0.0 | 0.04 | 15.95 | 0.00 | 2.154 | 10.90 | 0.30 | 5.5 | 94.3 | 0.2 | -0.92 | 1.16 | 0.82 | 0.85 | 2.68 | 28017 | 3657 | 12 | 0 | 24 | 0 | 0 | logfile |
✔ | 6E10 | 8951 | 2023-04-21 | 2018-07-08 | 4.16 | 4.27 | — | 4.2 | 0.008 | 1.16 | 11.0 | 0.07 | 10.73 | 0.01 | 1.063 | 10.41 | 1.07 | 5.8 | 93.8 | 0.4 | -4.45 | 0.79 | 0.72 | — | 4.1 | 0.005 | 0.78 | 0.0 | 0.05 | 12.99 | 0.00 | 2.041 | 18.20 | 0.05 | 7.3 | 92.4 | 0.2 | -0.84 | 1.49 | 0.83 | 0.81 | — | 57352 | 6823 | 34 | 0 | 359 | 0 | 0 | logfile |
✔ | 7QGU | 13959 | 2023-04-28 | 2021-12-10 | 4.75 | 7.20 | — | 5.6 | 0.010 | 1.50 | 1.0 | 0.04 | 15.78 | 0.02 | 1.064 | 11.45 | 0.26 | 6.6 | 91.0 | 2.3 | -1.82 | 0.70 | 0.57 | — | 5.5 | 0.009 | 1.09 | 0.0 | 0.05 | 20.48 | 0.01 | 1.102 | 77.49 | 0.00 | 10.9 | 88.3 | 0.8 | -1.78 | 2.90 | 0.82 | 0.84 | — | 135606 | 5791 | 54 | 4656 | 0 | 0 | 0 | logfile |
✔ | 8GWE | 34310 | 2023-04-26 | 2022-09-16 | 2.66 | 3.19 | 2.77 | 16.0 | 0.009 | 0.97 | 5.0 | 0.06 | 17.61 | 0.01 | 1.065 | 13.66 | 5.00 | 8.4 | 91.2 | 0.3 | -1.93 | 0.39 | 0.09 | 0.45 | 10.1 | 0.003 | 0.74 | 0.0 | 0.04 | 17.58 | 0.00 | 1.950 | 15.89 | 3.34 | 8.5 | 91.3 | 0.2 | -1.91 | 1.11 | 0.44 | 0.22 | 0.12 | 22040 | 2668 | 15 | 56 | 10 | 1 | 0 | logfile |
✔ | 7VAQ | 31858 | 2023-04-29 | 2021-08-30 | 3.6 | 3.18 | 3.57 | 3.3 | 0.003 | 0.53 | 0.0 | 0.04 | 13.52 | 0.00 | 1.066 | 5.47 | 0.00 | 1.8 | 98.2 | 0.0 | 1.14 | 0.57 | 0.77 | 2.21 | 3.2 | 0.004 | 0.61 | 0.0 | 0.04 | 16.58 | 0.00 | 1.859 | 8.32 | 0.29 | 3.2 | 96.8 | 0.0 | 0.04 | 0.74 | 0.60 | 0.79 | 2.18 | 29558 | 3788 | 15 | 0 | 6 | 0 | 0 | logfile |
✔ | 6W6E | 21553 | 2023-04-29 | 2020-03-16 | 3.7 | 3.92 | — | 3.7 | 0.008 | 0.86 | 0.0 | 0.05 | 14.33 | 0.01 | 1.067 | 10.67 | 0.53 | 10.6 | 89.2 | 0.2 | -4.00 | 0.78 | 0.73 | 1.83 | 3.7 | 0.006 | 0.77 | 0.0 | 0.05 | 16.05 | 0.00 | 2.049 | 12.29 | 0.90 | 9.7 | 90.2 | 0.1 | -1.22 | 1.29 | 0.85 | 0.86 | 1.69 | 30805 | 3932 | 14 | 0 | 38 | 0 | 0 | logfile |
✔ | 7CAC | 30326 | 2023-04-28 | 2020-06-08 | 3.55 | 3.83 | — | 3.6 | 0.008 | 0.89 | 0.0 | 0.06 | 9.66 | 0.00 | 1.078 | 25.83 | 1.02 | 5.5 | 94.3 | 0.3 | -3.22 | 0.77 | 0.65 | 2.65 | 3.6 | 0.006 | 0.71 | 0.0 | 0.05 | 12.28 | 0.00 | 2.130 | 13.82 | 0.16 | 5.2 | 94.7 | 0.1 | -0.88 | 1.22 | 0.86 | 0.78 | 2.26 | 28122 | 3499 | 23 | 0 | 60 | 0 | 0 | logfile |
✔ | 6E11 | 8952 | 2023-04-21 | 2018-07-08 | 4.23 | 4.35 | — | 4.2 | 0.007 | 1.11 | 6.0 | 0.06 | 9.72 | 0.01 | 1.079 | 10.29 | 0.49 | 7.9 | 91.8 | 0.3 | -4.77 | 0.79 | 0.73 | — | 4.2 | 0.003 | 0.69 | 0.0 | 0.04 | 12.46 | 0.00 | 2.061 | 15.21 | 0.02 | 7.7 | 92.2 | 0.1 | -1.17 | 1.07 | 0.81 | 0.79 | — | 57401 | 6820 | 34 | 0 | 373 | 0 | 0 | logfile |
✔ | 7CAK | 30333 | 2023-04-29 | 2020-06-08 | 3.58 | 3.74 | — | 3.5 | 0.027 | 1.67 | 3.0 | 0.09 | 11.56 | 0.01 | 1.082 | 48.79 | 1.80 | 9.4 | 89.8 | 0.8 | -4.79 | 0.72 | 0.69 | 2.67 | 3.5 | 0.003 | 0.68 | 0.0 | 0.04 | 13.22 | 0.00 | 1.895 | 12.39 | 0.15 | 5.6 | 94.3 | 0.1 | -1.13 | 1.25 | 0.78 | 0.77 | 1.99 | 30263 | 3771 | 27 | 0 | 60 | 0 | 0 | logfile |
✔ | 5ZEU | 6923 | 2023-04-19 | 2018-02-28 | 3.7 | 3.76 | — | 3.7 | 0.007 | 1.11 | 0.0 | 0.05 | 16.39 | 0.01 | 1.086 | 17.26 | 1.40 | 8.6 | 90.3 | 1.1 | -4.22 | 0.59 | 0.75 | 1.73 | 3.7 | 0.006 | 0.81 | 0.0 | 0.04 | 16.40 | 0.01 | 1.993 | 15.78 | 1.05 | 10.6 | 89.1 | 0.3 | -1.34 | 1.35 | 0.62 | 0.80 | 1.57 | 52954 | 2406 | 22 | 1583 | 0 | 0 | 0 | logfile |
✔ | 3JCS | 6583 | 2023-04-23 | 2016-01-21 | 2.8 | 3.07 | — | 3.0 | 0.009 | 0.98 | 1.0 | 0.05 | 19.57 | 0.03 | 1.093 | 24.89 | 1.41 | 11.8 | 88.0 | 0.2 | -5.35 | 0.72 | 0.78 | 3.98 | 3.0 | 0.007 | 0.88 | 0.0 | 0.04 | 19.86 | 0.01 | 1.859 | 18.52 | 3.13 | 10.9 | 89.1 | 0.1 | -2.74 | 0.51 | 0.71 | 0.80 | 2.76 | 117257 | 5847 | 74 | 3420 | 109 | 144 | 0 | logfile |
✔ | 6BX3 | 7303 | 2023-04-21 | 2017-12-16 | 4.3 | 4.71 | — | 4.4 | 0.007 | 1.49 | 0.0 | 0.08 | 12.65 | 0.01 | 1.094 | 24.88 | 0.97 | 18.8 | 81.2 | 0.1 | -5.00 | 0.74 | 0.72 | — | 4.4 | 0.004 | 0.86 | 0.0 | 0.05 | 13.11 | 0.00 | 2.070 | 24.58 | 0.00 | 17.2 | 82.7 | 0.1 | -3.48 | 1.39 | 0.74 | 0.72 | — | 10456 | 1413 | 7 | 0 | 0 | 0 | 0 | logfile |
✔ | 5VYA | 8746 | 2023-04-28 | 2017-05-24 | 4.0 | 4.09 | — | 4.0 | 0.024 | 1.94 | 1.0 | 0.10 | 12.34 | 0.01 | 1.095 | 10.89 | 0.77 | 4.6 | 94.1 | 1.4 | -1.01 | 0.73 | 0.65 | — | 4.0 | 0.004 | 0.83 | 0.0 | 0.05 | 17.35 | 0.00 | 2.131 | 20.15 | 0.74 | 6.2 | 93.3 | 0.5 | -0.57 | 1.54 | 0.79 | 0.78 | — | 27691 | 3474 | 13 | 0 | 40 | 0 | 0 | logfile |
✔ | 5VCA | 8659 | 2023-04-23 | 2017-03-31 | 4.8 | 6.04 | — | 5.9 | 0.021 | 2.64 | 50.0 | 0.15 | 5.91 | 0.01 | 1.097 | 2.19 | 0.00 | 6.9 | 90.0 | 3.1 | -4.41 | 0.73 | 0.70 | — | 5.8 | 0.004 | 0.74 | 0.0 | 0.04 | 6.04 | 0.00 | 2.096 | 8.58 | 0.00 | 15.1 | 84.8 | 0.1 | -2.22 | 2.93 | 0.76 | 0.67 | — | 16080 | 3264 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 6XE6 | 22144 | 2023-04-20 | 2020-06-12 | 4.53 | 4.61 | — | 4.5 | 0.011 | 1.40 | 2.0 | 0.07 | 14.93 | 0.01 | 1.098 | 10.14 | 1.05 | 11.3 | 87.4 | 1.2 | -4.98 | 0.52 | 0.76 | — | 4.5 | 0.003 | 0.78 | 0.0 | 0.04 | 13.64 | 0.00 | 2.148 | 13.39 | 0.15 | 9.2 | 90.3 | 0.5 | -1.67 | 1.21 | 0.53 | 0.75 | — | 6530 | 826 | 1 | 0 | 6 | 0 | 0 | logfile |
✔ | 7N1Y | 24127 | 2023-04-27 | 2021-05-28 | 4.3 | 2.48 | — | 2.0 | 0.016 | 2.11 | 23.0 | 0.15 | 14.95 | 0.01 | 1.099 | 10.84 | 1.91 | 8.5 | 90.8 | 0.6 | -2.82 | 0.78 | 0.64 | — | 2.0 | 0.003 | 0.77 | 0.0 | 0.05 | 14.40 | 0.00 | 2.080 | 14.49 | 0.07 | 5.8 | 94.2 | 0.0 | -1.33 | 0.71 | 0.78 | 0.64 | — | 26636 | 3242 | 31 | 0 | 91 | 0 | 0 | logfile |
✔ | 6H25 | 0128 | 2023-04-26 | 2018-07-13 | 3.8 | 3.89 | — | 3.9 | 0.006 | 1.10 | 1.0 | 0.06 | 10.98 | 0.01 | 1.101 | 12.90 | 1.51 | 5.7 | 93.9 | 0.4 | -2.77 | 0.49 | 0.63 | 1.51 | 3.9 | 0.003 | 0.71 | 0.0 | 0.04 | 15.76 | 0.00 | 2.094 | 9.76 | 0.40 | 4.9 | 95.0 | 0.0 | 0.01 | 1.57 | 0.70 | 0.81 | 1.54 | 22138 | 2971 | 12 | 6 | 0 | 0 | 0 | logfile |
✔ | 6iG0 | 9660 | 2023-04-25 | 2018-09-21 | 3.37 | 3.49 | — | 3.4 | 0.009 | 1.18 | 5.0 | 0.07 | 12.62 | 0.01 | 1.102 | 14.78 | 1.40 | 10.4 | 89.4 | 0.1 | -5.65 | 0.75 | 0.80 | 2.88 | 3.4 | 0.003 | 0.71 | 0.0 | 0.04 | 16.44 | 0.00 | 1.950 | 14.28 | 0.75 | 9.1 | 90.9 | 0.0 | -2.26 | 1.35 | 0.76 | 0.82 | 2.06 | 19354 | 2258 | 11 | 67 | 5 | 0 | 0 | logfile |
✔ | 7KEA | 22836 | 2023-04-26 | 2020-10-10 | 3.33 | 3.98 | — | 3.8 | 0.013 | 1.84 | 6.0 | 0.10 | 13.79 | 0.01 | 1.103 | 0.39 | 1.24 | 7.2 | 92.4 | 0.4 | -1.82 | 0.81 | 0.76 | 2.96 | 3.7 | 0.005 | 0.69 | 0.0 | 0.04 | 14.31 | 0.00 | 2.170 | 9.50 | 0.13 | 4.4 | 95.6 | 0.0 | -0.28 | 0.65 | 0.82 | 0.80 | 2.32 | 22351 | 2875 | 18 | 0 | 58 | 0 | 0 | logfile |
✔ | 7CAB | 30325 | 2023-04-27 | 2020-06-08 | 3.52 | 3.75 | — | 3.7 | 0.011 | 0.89 | 0.0 | 0.06 | 9.61 | 0.00 | 1.105 | 13.85 | 0.82 | 4.5 | 95.5 | 0.0 | -3.16 | 0.77 | 0.78 | 3.43 | 3.7 | 0.003 | 0.63 | 0.0 | 0.04 | 13.29 | 0.00 | 2.189 | 9.09 | 0.30 | 3.8 | 96.2 | 0.0 | -0.35 | 1.21 | 0.78 | 0.82 | 2.98 | 24978 | 3087 | 21 | 0 | 60 | 0 | 0 | logfile |