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Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 5G05 | 3388 | 2024-03-12 | 2016-03-16 | 3.4 | 3.84 | — | 3.5 | 0.016 | 1.81 | 55.0 | 0.10 | 18.98 | 0.01 | 0.612 | 56.69 | 17.76 | 4.5 | 93.6 | 1.8 | -0.14 | 0.85 | 0.76 | 1.42 | 3.5 | 0.004 | 0.88 | 3.0 | 0.04 | 17.62 | 0.00 | 1.935 | 18.68 | 4.41 | 4.9 | 94.6 | 0.5 | 0.80 | 1.69 | 0.89 | 0.85 | 1.26 | 63181 | 8027 | 21 | 0 | 3 | 0 | 0 | logfile |
✔ | 5LMX | 4088 | 2024-03-21 | 2016-08-02 | 4.9 | 5.64 | — | 4.9 | 0.011 | 1.55 | 0.0 | 0.06 | 18.69 | 0.01 | 0.614 | 16.48 | 8.43 | 6.5 | 92.9 | 0.6 | -2.70 | 0.80 | 0.62 | — | 4.9 | 0.003 | 0.72 | 0.0 | 0.04 | 14.48 | 0.00 | 2.049 | 16.79 | 0.00 | 4.4 | 95.6 | 0.0 | -0.19 | 2.22 | 0.87 | 0.79 | — | 31118 | 3918 | 19 | 0 | 6 | 0 | 0 | logfile |
✔ | 7NAT | 12247 | 2024-03-25 | 2021-01-25 | 3.59 | 4.72 | 3.68 | 2.6 | 0.009 | 0.84 | 6.0 | 0.05 | 23.25 | 0.02 | 0.616 | 27.68 | 0.00 | 7.4 | 92.6 | 0.0 | -3.28 | 0.90 | 0.81 | 0.72 | 2.5 | 0.004 | 0.68 | 0.0 | 0.03 | 23.17 | 0.01 | 1.844 | 27.20 | 4.15 | 4.4 | 95.5 | 0.0 | -1.03 | 0.74 | 0.92 | 0.87 | 0.59 | 50921 | 2562 | 25 | 1430 | 66 | 0 | 0 | logfile |
✔ | 6YAM | 10761 | 2024-03-13 | 2020-03-12 | 3.6 | 3.47 | — | 3.5 | 0.021 | 2.06 | 55.0 | 0.12 | 20.11 | 0.02 | 0.634 | 17.64 | 3.01 | 10.8 | 85.2 | 4.0 | -4.49 | 0.39 | 0.52 | 0.80 | 3.4 | 0.004 | 0.85 | 0.0 | 0.04 | 21.19 | 0.01 | 2.004 | 13.86 | 4.48 | 11.1 | 88.5 | 0.4 | -2.37 | 1.57 | 0.46 | 0.65 | 1.11 | 118536 | 9811 | 51 | 1863 | 5 | 0 | 0 | logfile |
✔ | 8EJL | 28186 | 2024-03-18 | 2022-09-17 | 3.9 | 4.30 | 3.90 | 4.1 | 0.005 | 0.54 | 0.0 | 0.04 | 11.63 | 0.00 | 0.636 | 9.14 | 3.04 | 2.2 | 97.8 | 0.0 | 1.75 | 0.68 | 0.85 | 1.79 | 4.1 | 0.004 | 0.64 | 0.0 | 0.04 | 14.81 | 0.00 | 2.124 | 10.08 | 2.86 | 2.4 | 97.6 | 0.0 | 2.14 | 0.56 | 0.68 | 0.85 | 1.34 | 22155 | 3095 | 30 | 0 | 0 | 0 | 0 | logfile |
✔ | 6QW6 | 4658 | 2024-03-18 | 2019-03-05 | 2.92 | 3.02 | — | 3.0 | 0.010 | 1.21 | 14.0 | 0.07 | 17.14 | 0.01 | 0.644 | 10.58 | 1.79 | 5.1 | 94.5 | 0.4 | -3.43 | 0.62 | 0.67 | 2.44 | 3.0 | 0.007 | 0.92 | 3.0 | 0.05 | 18.53 | 0.01 | 1.837 | 20.29 | 2.75 | 5.1 | 94.9 | 0.0 | -1.07 | 0.80 | 0.69 | 0.77 | 2.44 | 89236 | 10350 | 42 | 271 | 5 | 0 | 0 | logfile |
✔ | 7PBJ | 13293 | 2024-03-11 | 2021-08-02 | 3.4 | 3.54 | 3.40 | 3.2 | 0.018 | 2.20 | 140.0 | 0.13 | 19.50 | 0.01 | 0.650 | 29.74 | 11.71 | 2.5 | 96.9 | 0.6 | 1.69 | 0.71 | 0.67 | 2.07 | 3.2 | 0.004 | 0.74 | 1.0 | 0.04 | 17.55 | 0.00 | 1.892 | 15.19 | 1.99 | 3.3 | 96.6 | 0.1 | 1.08 | 2.34 | 0.89 | 0.86 | 1.98 | 59486 | 8015 | 42 | 0 | 28 | 14 | 0 | logfile |
✔ | 5MPD | 3534 | 2024-03-24 | 2016-12-16 | 4.1 | 4.14 | — | 4.1 | 0.035 | 3.40 | 330.0 | 0.20 | 17.76 | 0.03 | 0.656 | 3.82 | 2.78 | 5.6 | 92.3 | 2.1 | -2.14 | 0.21 | 0.37 | — | 4.1 | 0.004 | 0.84 | 0.0 | 0.04 | 15.47 | 0.00 | 2.060 | 18.49 | 0.02 | 6.2 | 93.6 | 0.2 | -0.95 | 1.33 | 0.28 | 0.61 | — | 40974 | 5142 | 13 | 0 | 0 | 0 | 0 | logfile |
✔ | 6N1H | 8902 | 2024-03-15 | 2018-11-08 | 3.17 | 3.22 | — | 3.2 | 0.006 | 1.13 | 0.0 | 0.06 | 12.23 | 0.01 | 0.657 | 32.07 | 3.97 | 7.4 | 92.6 | 0.0 | -7.22 | 0.39 | 0.46 | 0.05 | 3.2 | 0.003 | 0.71 | 0.0 | 0.04 | 16.80 | 0.00 | 2.184 | 11.28 | 1.61 | 6.7 | 93.3 | 0.0 | 0.82 | 3.97 | 0.63 | 0.84 | 1.86 | 10991 | 1328 | 16 | 0 | 0 | 0 | 0 | logfile |
✔ | 7BoH | 12243 | 2024-03-25 | 2021-01-25 | 2.82 | 3.09 | 2.90 | 2.8 | 0.006 | 0.61 | 4.0 | 0.04 | 22.28 | 0.02 | 0.657 | 6.27 | 0.00 | 3.3 | 96.7 | 0.0 | -1.47 | 0.82 | 0.80 | 2.52 | 2.8 | 0.008 | 0.76 | 0.0 | 0.04 | 22.48 | 0.01 | 1.146 | 13.35 | 3.51 | 4.0 | 96.0 | 0.0 | -0.16 | 1.21 | 0.87 | 0.90 | 2.29 | 52154 | 2445 | 25 | 1527 | 157 | 0 | 0 | logfile |
✔ | 7UiL | 26548 | 2024-03-23 | 2022-03-29 | 4.3 | 9.74 | 4.31 | 8.6 | 0.004 | 0.67 | 0.0 | 0.04 | 13.36 | 0.00 | 0.667 | 9.13 | 0.07 | 1.2 | 98.7 | 0.1 | 0.35 | 0.63 | 0.36 | — | 8.6 | 0.003 | 0.64 | 0.0 | 0.04 | 13.37 | 0.00 | 2.115 | 16.28 | 0.02 | 2.8 | 97.2 | 0.0 | 0.17 | 1.62 | 0.77 | 0.64 | — | 37614 | 4641 | 13 | 0 | 0 | 0 | 0 | logfile |
✔ | 5G5L | 3439 | 2024-03-23 | 2016-05-26 | 4.8 | 5.08 | — | 4.8 | 0.010 | 1.38 | 14.0 | 0.09 | 16.60 | 0.01 | 0.675 | 31.05 | 7.76 | 6.0 | 92.2 | 1.8 | -2.38 | 0.81 | 0.71 | — | 4.8 | 0.004 | 0.74 | 0.0 | 0.04 | 13.39 | 0.00 | 2.050 | 18.55 | 0.00 | 4.1 | 95.9 | 0.1 | 0.41 | 3.23 | 0.86 | 0.83 | — | 37349 | 4686 | 20 | 0 | 7 | 0 | 0 | logfile |
✔ | 5MQ0 | 3541 | 2024-03-17 | 2016-12-19 | 4.17 | 4.40 | — | 4.2 | 0.010 | 1.54 | 21.0 | 0.11 | 17.52 | 0.01 | 0.679 | 7.92 | 2.73 | 7.7 | 91.4 | 0.9 | -2.01 | 0.68 | 0.56 | — | 4.1 | 0.003 | 0.69 | 0.0 | 0.04 | 16.95 | 0.00 | 1.888 | 18.08 | 0.00 | 6.0 | 94.0 | 0.1 | 0.11 | 2.10 | 0.74 | 0.73 | — | 77441 | 9673 | 52 | 448 | 99 | 0 | 0 | logfile |
✔ | 6i0Y | 0322 | 2024-03-19 | 2018-10-26 | 3.2 | 4.80 | — | 4.7 | 0.010 | 1.49 | 8.0 | 0.07 | 23.52 | 0.01 | 0.682 | 13.02 | 11.41 | 16.0 | 77.5 | 6.5 | -5.00 | 0.59 | 0.58 | 0.26 | 4.7 | 0.006 | 0.87 | 1.0 | 0.04 | 23.22 | 0.01 | 0.938 | 24.00 | 6.89 | 14.2 | 83.8 | 2.0 | -2.91 | 1.60 | 0.61 | 0.73 | 0.64 | 93619 | 3551 | 48 | 3049 | 144 | 439 | 0 | logfile |
✔ | 6GXo | 0082 | 2024-03-27 | 2018-06-27 | 3.9 | 4.77 | — | 4.3 | 0.004 | 0.82 | 4.0 | 0.04 | 22.42 | 0.01 | 0.695 | 7.13 | 0.15 | 8.2 | 91.3 | 0.5 | -3.98 | 0.85 | 0.83 | 0.32 | 4.3 | 0.003 | 0.69 | 0.0 | 0.03 | 23.42 | 0.00 | 2.039 | 21.91 | 5.57 | 9.4 | 90.3 | 0.2 | -1.77 | 1.78 | 0.87 | 0.87 | 0.66 | 151479 | 6643 | 59 | 4643 | 1 | 0 | 0 | logfile |
✔ | 4V91 | 2599 | 2024-03-15 | 2014-03-21 | 3.7 | 3.84 | — | 3.8 | 0.133 | 4.77 | 525.0 | 0.43 | 25.54 | 0.07 | 0.695 | 17.94 | 12.79 | 14.1 | 78.2 | 7.8 | -5.39 | 0.33 | 0.36 | 0.15 | 3.8 | 0.042 | 1.66 | 0.0 | 0.05 | 23.19 | 0.02 | 1.926 | 18.85 | 3.11 | 9.9 | 89.3 | 0.8 | -2.99 | 2.00 | 0.63 | 0.82 | 1.46 | 125665 | 6450 | 45 | 3482 | 0 | 0 | 0 | logfile |
✔ | 8oHS | 16884 | 2024-03-16 | 2023-03-21 | 4.1 | 4.12 | 3.94 | 4.0 | 0.009 | 1.09 | 0.0 | 0.08 | 14.89 | 0.00 | 0.697 | 2.69 | 0.41 | 4.5 | 95.5 | 0.0 | -1.04 | 0.47 | 0.78 | — | 4.0 | 0.003 | 0.67 | 0.0 | 0.04 | 13.75 | 0.00 | 2.194 | 7.55 | 0.00 | 2.0 | 98.0 | 0.0 | 1.36 | 3.00 | 0.51 | 0.86 | — | 13335 | 1758 | 9 | 0 | 0 | 0 | 0 | logfile |
✔ | 8TKG | 41350 | 2024-03-23 | 2023-07-25 | 2.5 | 2.23 | — | 2.6 | 0.002 | 0.49 | 0.0 | 0.04 | 17.40 | 0.00 | 0.701 | 5.96 | 0.24 | 2.0 | 98.0 | 0.0 | 2.96 | 0.74 | 0.79 | 2.06 | 2.6 | 0.004 | 0.55 | 1.0 | 0.04 | 16.74 | 0.00 | 1.490 | 7.32 | 1.14 | 2.5 | 97.5 | 0.0 | 2.62 | 0.52 | 0.74 | 0.83 | 2.98 | 145336 | 8840 | 12 | 0 | 44 | 640 | 71936 | logfile |
✔ | 5A0Q | 2981 | 2024-03-24 | 2015-04-22 | 3.5 | 3.34 | — | 3.3 | 0.019 | 2.22 | 14.0 | 0.11 | 16.22 | 0.02 | 0.702 | 33.75 | 1.99 | 4.5 | 95.1 | 0.4 | -3.18 | 0.60 | 0.61 | 1.82 | 3.3 | 0.004 | 0.82 | 0.0 | 0.05 | 18.24 | 0.01 | 2.124 | 20.58 | 5.64 | 4.6 | 95.3 | 0.1 | -1.45 | 0.96 | 0.64 | 0.64 | 0.91 | 43448 | 5582 | 34 | 0 | 6 | 0 | 0 | logfile |
✔ | 6RPL | 4978 | 2024-03-19 | 2019-05-14 | 3.85 | 3.98 | — | 3.9 | 0.007 | 0.95 | 0.0 | 0.06 | 14.56 | 0.01 | 0.703 | 18.70 | 0.60 | 12.3 | 87.7 | 0.0 | -4.26 | 0.75 | 0.83 | 3.13 | 3.9 | 0.003 | 0.66 | 0.0 | 0.04 | 16.51 | 0.00 | 2.155 | 11.24 | 3.51 | 10.8 | 89.2 | 0.0 | -3.00 | 0.79 | 0.76 | 0.84 | 2.41 | 93960 | 11340 | 60 | 0 | 0 | 0 | 0 | logfile |