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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7Y14 | 33556 | 2022-12-11 | 2022-06-06 | 3.2 | 3.29 | 3.09 | 3.3 | 0.004 | 0.66 | 1.0 | 0.04 | 13.60 | 0.01 | 2.312 | 8.75 | 0.00 | 4.2 | 95.8 | 0.0 | 2.46 | 0.51 | 0.76 | 2.28 | 3.3 | 0.003 | 0.56 | 1.0 | 0.04 | 15.41 | 0.00 | 2.281 | 8.75 | 0.00 | 5.0 | 95.0 | 0.0 | 2.69 | 1.20 | 0.50 | 0.78 | 1.95 | 2145 | 265 | 1 | 0 | 4 | 0 | 0 | logfile |
✔ | 7JV2 | 22491 | 2022-12-11 | 2020-08-20 | 3.5 | 3.49 | 3.41 | 3.7 | 0.015 | 1.39 | 0.0 | 0.08 | 11.43 | 0.01 | 2.587 | 0.00 | 1.32 | 3.6 | 96.4 | 0.0 | 0.82 | 0.69 | 0.74 | 3.48 | 3.7 | 0.005 | 0.81 | 0.0 | 0.04 | 14.94 | 0.00 | 2.223 | 15.46 | 0.44 | 6.9 | 93.1 | 0.0 | -1.20 | 1.29 | 0.70 | 0.77 | 3.82 | 2151 | 282 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 7PY2 | 13708 | 2022-12-11 | 2021-10-08 | 2.59 | 2.64 | 1.53 | 2.7 | 0.015 | 1.83 | 0.0 | 0.08 | 17.26 | 0.01 | 2.423 | 1.71 | 2.00 | 9.1 | 90.9 | 0.0 | -5.22 | 0.45 | 0.84 | 6.05 | 2.8 | 0.004 | 0.86 | 0.0 | 0.05 | 18.18 | 0.00 | 2.155 | 2.93 | 4.00 | 5.2 | 94.8 | 0.0 | -3.95 | 1.38 | 0.49 | 0.87 | 5.97 | 2152 | 316 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 7XiZ | 33213 | 2022-12-11 | 2022-04-14 | 3.74 | 3.27 | 3.81 | 3.1 | 0.013 | 1.10 | 0.0 | 0.06 | 18.15 | 0.01 | 2.386 | 4.94 | 0.00 | 12.8 | 86.4 | 0.8 | -3.37 | 0.35 | 0.71 | 1.78 | 3.1 | 0.004 | 0.82 | 0.0 | 0.05 | 18.16 | 0.01 | 2.215 | 14.34 | 0.43 | 16.6 | 82.6 | 0.8 | -3.64 | 1.53 | 0.37 | 0.73 | 1.52 | 2161 | 267 | 1 | 0 | 2 | 0 | 0 | logfile |
✔ | 7VV0 | 32133 | 2022-12-11 | 2021-11-04 | 3.5 | 3.69 | — | 3.7 | 0.010 | 1.49 | 1.0 | 0.09 | 14.09 | 0.01 | 2.007 | 11.04 | 2.93 | 4.5 | 95.5 | 0.0 | -3.44 | 0.65 | 0.80 | 1.76 | 3.7 | 0.003 | 0.61 | 0.0 | 0.04 | 15.15 | 0.00 | 2.257 | 7.66 | 0.84 | 4.2 | 95.8 | 0.0 | 2.03 | 1.25 | 0.64 | 0.80 | 1.65 | 2175 | 268 | 2 | 0 | 1 | 0 | 0 | logfile |
✔ | 7VV4 | 32137 | 2022-12-11 | 2021-11-04 | 2.97 | 3.66 | — | 3.7 | 0.007 | 1.20 | 2.0 | 0.09 | 14.57 | 0.01 | 1.600 | 16.21 | 3.75 | 4.2 | 95.8 | 0.0 | -0.53 | 0.64 | 0.78 | 2.05 | 3.7 | 0.003 | 0.71 | 0.0 | 0.04 | 16.91 | 0.00 | 2.171 | 10.81 | 1.67 | 1.9 | 97.7 | 0.4 | 2.21 | 0.61 | 0.59 | 0.76 | 1.02 | 2181 | 269 | 3 | 0 | 1 | 0 | 0 | logfile |
✔ | 7Y13 | 33555 | 2022-12-11 | 2022-06-06 | 3.1 | 3.20 | 3.10 | 3.2 | 0.005 | 0.68 | 0.0 | 0.04 | 13.19 | 0.01 | 2.195 | 8.46 | 0.00 | 6.1 | 93.9 | 0.0 | 1.88 | 0.59 | 0.80 | 3.01 | 3.2 | 0.004 | 0.58 | 0.0 | 0.04 | 15.64 | 0.01 | 2.188 | 8.24 | 0.86 | 5.3 | 94.7 | 0.0 | 2.59 | 0.26 | 0.54 | 0.80 | 2.60 | 2199 | 264 | 1 | 0 | 7 | 2 | 0 | logfile |
✔ | 6PEo | 20328 | 2022-12-11 | 2019-06-20 | 3.3 | 3.52 | — | 3.6 | 0.003 | 0.54 | 0.0 | 0.05 | 13.06 | 0.01 | 2.492 | 10.62 | 0.00 | 9.7 | 90.3 | 0.0 | -1.64 | 0.41 | 0.82 | 3.20 | 3.6 | 0.006 | 0.64 | 0.0 | 0.06 | 15.74 | 0.00 | 2.435 | 9.07 | 0.00 | 8.1 | 91.9 | 0.0 | -2.61 | 1.64 | 0.42 | 0.83 | 4.88 | 2205 | 320 | 5 | 0 | 0 | 0 | 0 | logfile |
✔ | 7B6E | 12053 | 2022-12-11 | 2020-12-07 | 4.5 | 2.79 | — | 5.1 | 0.005 | 1.03 | 0.0 | 0.05 | 15.04 | 0.01 | 2.129 | 36.28 | 0.00 | 10.9 | 89.1 | 0.0 | -3.88 | 0.62 | 0.66 | — | 4.9 | 0.003 | 0.98 | 0.0 | 0.05 | 14.71 | 0.00 | 2.119 | 24.18 | 0.00 | 10.9 | 89.1 | 0.0 | -1.33 | 0.86 | 0.61 | 0.66 | — | 2205 | 269 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 6ZRF | 11380 | 2022-12-11 | 2020-07-13 | 3.6 | 3.66 | 1.96 | 3.6 | 0.014 | 1.03 | 0.0 | 0.05 | 13.43 | 0.00 | 1.993 | 42.14 | 0.00 | 4.9 | 95.1 | 0.0 | -6.22 | 0.67 | 0.79 | 1.84 | 3.7 | 0.003 | 0.73 | 0.0 | 0.04 | 14.44 | 0.00 | 2.284 | 18.31 | 0.42 | 10.6 | 89.4 | 0.0 | -5.84 | 0.52 | 0.69 | 0.81 | 3.45 | 2220 | 300 | 12 | 0 | 0 | 0 | 0 | logfile |
✔ | 7VV6 | 32139 | 2022-12-11 | 2021-11-04 | 3.3 | 3.47 | — | 3.5 | 0.010 | 1.38 | 0.0 | 0.07 | 19.04 | 0.01 | 2.291 | 4.89 | 10.37 | 5.2 | 94.8 | 0.0 | -4.22 | 0.62 | 0.83 | 1.64 | 3.4 | 0.003 | 0.62 | 0.0 | 0.04 | 17.02 | 0.00 | 2.186 | 6.88 | 0.41 | 2.2 | 97.8 | 0.0 | 3.08 | 0.69 | 0.63 | 0.85 | 2.36 | 2227 | 271 | 1 | 0 | 2 | 0 | 0 | logfile |
✔ | 6L4S | 0833 | 2022-12-11 | 2019-10-21 | 3.37 | 3.47 | — | 4.0 | 0.014 | 1.36 | 0.0 | 0.09 | 10.28 | 0.01 | 2.408 | 7.28 | 0.00 | 5.7 | 94.3 | 0.0 | -3.73 | 0.28 | 0.67 | 4.12 | 4.1 | 0.008 | 0.87 | 0.0 | 0.06 | 15.50 | 0.00 | 2.214 | 12.64 | 0.44 | 14.5 | 85.5 | 0.0 | -3.63 | 3.12 | 0.35 | 0.74 | 2.16 | 2268 | 330 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 8EA0 | 27970 | 2022-12-11 | 2022-08-27 | 2.56 | 2.05 | 2.66 | 1.9 | 0.003 | 0.55 | 0.0 | 0.04 | 12.24 | 0.00 | 2.237 | 8.88 | 0.00 | 4.3 | 95.7 | 0.0 | -0.24 | 0.72 | 0.77 | 2.21 | 1.9 | 0.004 | 0.56 | 0.0 | 0.04 | 14.88 | 0.00 | 2.244 | 7.37 | 0.42 | 4.6 | 95.4 | 0.0 | 0.69 | 0.41 | 0.74 | 0.80 | 2.82 | 2286 | 285 | 1 | 0 | 2 | 0 | 0 | logfile |
✔ | 7QL2 | 14061 | 2022-12-11 | 2021-12-19 | 2.95 | 2.96 | 2.65 | 3.1 | 0.010 | 2.11 | 2.0 | 0.11 | 10.98 | 0.01 | 2.674 | 0.00 | 0.00 | 7.6 | 92.4 | 0.0 | -2.82 | 0.30 | 0.74 | 4.50 | 3.4 | 0.003 | 0.61 | 0.0 | 0.05 | 12.64 | 0.00 | 2.504 | 1.31 | 2.22 | 9.0 | 91.0 | 0.0 | -2.99 | 1.14 | 0.22 | 0.71 | 4.06 | 2286 | 150 | 3 | 0 | 0 | 0 | 1179 | logfile |
✔ | 6QPi | 4614 | 2022-12-11 | 2019-02-14 | 3.3 | 3.37 | 2.73 | 3.4 | 0.005 | 0.70 | 0.0 | 0.04 | 6.59 | 0.01 | 2.432 | 2.09 | 0.00 | 1.4 | 98.6 | 0.0 | -3.02 | 0.39 | 0.62 | — | 3.3 | 0.002 | 0.44 | 0.0 | 0.04 | 4.28 | 0.00 | 2.462 | 1.49 | 0.00 | 2.8 | 97.2 | 0.0 | 2.25 | 1.20 | 0.40 | 0.62 | — | 2288 | 462 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 7V4D | 31708 | 2022-12-11 | 2021-08-12 | 3.5 | 3.38 | — | 4.0 | 0.003 | 0.54 | 0.0 | 0.05 | 11.89 | 0.00 | 2.234 | 14.44 | 0.00 | 7.1 | 92.9 | 0.0 | -5.68 | 0.41 | 0.80 | 4.67 | 4.1 | 0.003 | 0.67 | 0.0 | 0.05 | 12.86 | 0.00 | 2.200 | 8.46 | 0.00 | 7.7 | 92.3 | 0.0 | -3.57 | 1.19 | 0.41 | 0.79 | 4.19 | 2376 | 348 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 7M62 | 23687 | 2022-12-11 | 2021-03-25 | 3.9 | 3.91 | — | 4.3 | 0.007 | 1.13 | 0.0 | 0.07 | 14.83 | 0.00 | 2.321 | 32.83 | 0.00 | 23.3 | 76.7 | 0.0 | -4.97 | 0.55 | 0.62 | 2.27 | 4.3 | 0.003 | 0.99 | 0.0 | 0.05 | 15.87 | 0.00 | 2.105 | 21.17 | 0.00 | 22.7 | 77.3 | 0.0 | -4.56 | 2.11 | 0.57 | 0.65 | 3.17 | 2380 | 320 | 10 | 0 | 10 | 0 | 0 | logfile |
✔ | 7RZQ | 24774 | 2022-12-11 | 2021-08-27 | 2.09 | 2.26 | — | 2.7 | 0.006 | 0.40 | 0.0 | 0.03 | 14.23 | 0.00 | 2.339 | 4.69 | 0.00 | 1.9 | 98.1 | 0.0 | 2.15 | 0.78 | 0.79 | 1.56 | 2.0 | 0.003 | 0.30 | 0.0 | 0.03 | 15.08 | 0.00 | 2.337 | 5.30 | 0.36 | 0.0 | 100.0 | 0.0 | 5.90 | 0.30 | 0.82 | 0.83 | 1.87 | 2421 | 322 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 7L7H | 23212 | 2022-12-11 | 2020-12-28 | 4.0 | 2.39 | — | 4.0 | 0.008 | 1.47 | 0.0 | 0.08 | 15.10 | 0.01 | 2.199 | 13.87 | 3.53 | 36.3 | 63.7 | 0.0 | -6.00 | 0.47 | 0.60 | — | 4.0 | 0.005 | 0.99 | 0.0 | 0.06 | 16.55 | 0.00 | 2.113 | 18.49 | 1.96 | 32.1 | 67.9 | 0.0 | -4.69 | 0.91 | 0.51 | 0.65 | — | 2430 | 352 | 8 | 0 | 0 | 0 | 0 | logfile |
✔ | 7N9A | 24253 | 2022-12-11 | 2021-06-17 | 3.5 | 2.68 | — | 2.4 | 0.007 | 1.26 | 0.0 | 0.06 | 12.63 | 0.01 | 2.135 | 19.96 | 0.00 | 2.9 | 97.1 | 0.0 | -0.16 | 0.72 | 0.70 | 2.72 | 2.4 | 0.003 | 0.70 | 0.0 | 0.04 | 15.37 | 0.00 | 2.164 | 15.13 | 0.00 | 3.2 | 96.8 | 0.0 | -0.99 | 0.55 | 0.73 | 0.70 | 2.49 | 2431 | 312 | 2 | 0 | 0 | 0 | 0 | logfile |