The table shows a selection of parameters. Activate more columns using
the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 6CU8 | 7619 | 2023-02-17 | 2018-03-23 | 3.6 | 3.65 | — | 4.2 | 0.004 | 0.73 | 0.0 | 0.06 | 7.75 | 0.00 | 2.412 | 6.41 | 0.00 | 5.1 | 94.9 | 0.0 | -2.86 | 0.45 | 0.73 | -0.16 | 4.2 | 0.003 | 0.71 | 0.0 | 0.05 | 13.21 | 0.00 | 2.161 | 12.65 | 0.65 | 10.0 | 90.0 | 0.0 | -3.04 | 1.78 | 0.42 | 0.72 | 2.87 | 2880 | 410 | 10 | 0 | 0 | 0 | 0 | logfile |
✔ | 7RTV | 24690 | 2023-02-17 | 2021-08-15 | 3.96 | 4.06 | — | 4.1 | 0.003 | 0.68 | 0.0 | 0.04 | 16.49 | 0.00 | 2.207 | 14.04 | 0.32 | 2.8 | 97.2 | 0.0 | 3.61 | 0.41 | 0.63 | 0.10 | 4.1 | 0.004 | 0.88 | 0.0 | 0.04 | 18.40 | 0.00 | 2.174 | 15.94 | 0.97 | 3.0 | 97.0 | 0.0 | 2.97 | 1.77 | 0.41 | 0.64 | -0.08 | 2881 | 366 | 3 | 0 | 6 | 0 | 0 | logfile |
✔ | 6RiU | 4898 | 2023-02-17 | 2019-04-25 | 3.9 | 6.21 | 2.04 | 7.0 | 0.008 | 1.19 | 0.0 | 0.09 | 15.19 | 0.01 | 2.182 | 5.20 | 0.00 | 8.4 | 91.6 | 0.0 | -5.77 | 0.59 | 0.69 | 0.56 | 7.1 | 0.002 | 0.64 | 0.0 | 0.03 | 15.97 | 0.00 | 2.064 | 12.47 | 0.00 | 3.9 | 96.1 | 0.0 | -0.16 | 1.43 | 0.61 | 0.75 | 0.76 | 2882 | 182 | 2 | 0 | 0 | 0 | 1430 | logfile |
✔ | 7CAH | 30331 | 2023-02-17 | 2020-06-08 | 3.9 | 4.13 | — | 4.0 | 0.005 | 0.92 | 0.0 | 0.05 | 13.68 | 0.01 | 2.137 | 18.79 | 0.00 | 19.9 | 79.8 | 0.3 | -5.76 | 0.68 | 0.64 | 2.37 | 4.0 | 0.003 | 0.75 | 0.0 | 0.05 | 14.73 | 0.01 | 2.179 | 14.14 | 0.37 | 11.4 | 88.6 | 0.0 | -3.11 | 0.60 | 0.70 | 0.63 | 2.02 | 2889 | 404 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 6HUD | 0274 | 2023-02-17 | 2018-10-06 | 4.0 | 4.06 | — | 4.3 | 0.007 | 1.12 | 0.0 | 0.07 | 8.28 | 0.01 | 2.216 | 5.62 | 0.00 | 8.2 | 91.8 | 0.0 | -5.06 | 0.59 | 0.76 | — | 4.3 | 0.003 | 0.72 | 0.0 | 0.04 | 12.84 | 0.00 | 2.150 | 15.41 | 0.61 | 3.3 | 96.7 | 0.0 | -5.02 | 1.49 | 0.59 | 0.78 | — | 2905 | 385 | 5 | 0 | 0 | 0 | 0 | logfile |
✘ | 7YPQ | 34011 | 2023-02-17 | 2022-08-04 | 3.1 | 3.22 | 2.15 | 3.2 | 0.005 | 0.63 | 0.0 | 0.05 | 17.29 | 0.00 | 2.261 | 7.93 | 0.00 | 2.2 | 97.8 | 0.0 | -0.66 | 0.52 | 0.79 | 2.67 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 2915 | 327 | 2 | 11 | 0 | 0 | 0 | logfile |
✔ | 7E3C | 30979 | 2023-02-17 | 2021-02-08 | 4.2 | 3.87 | — | 3.7 | 0.026 | 1.55 | 0.0 | 0.05 | 13.81 | 0.01 | 2.151 | 21.49 | 0.00 | 17.2 | 82.3 | 0.5 | -3.63 | 0.79 | 0.79 | — | 3.7 | 0.004 | 0.74 | 0.0 | 0.05 | 13.74 | 0.00 | 2.114 | 15.30 | 0.00 | 12.3 | 87.7 | 0.0 | -2.92 | 1.13 | 0.79 | 0.79 | — | 2937 | 405 | 4 | 0 | 1 | 0 | 0 | logfile |
✔ | 7YL3 | 33902 | 2023-02-17 | 2022-07-25 | 3.2 | 3.58 | 3.19 | 3.5 | 0.011 | 2.22 | 0.0 | 0.06 | 10.67 | 0.00 | 1.654 | 22.50 | 0.00 | 3.3 | 96.7 | 0.0 | -4.03 | 0.45 | 0.76 | 4.44 | 3.5 | 0.007 | 0.82 | 0.0 | 0.05 | 13.30 | 0.00 | 2.246 | 11.74 | 0.31 | 12.8 | 87.2 | 0.0 | -4.85 | 1.42 | 0.43 | 0.77 | 4.87 | 2958 | 396 | 12 | 0 | 0 | 0 | 0 | logfile |
✔ | 7YL0 | 33901 | 2023-02-17 | 2022-07-25 | 3.2 | 3.47 | 3.15 | 3.4 | 0.016 | 2.51 | 0.0 | 0.11 | 14.66 | 0.01 | 2.515 | 18.86 | 0.00 | 5.0 | 95.0 | 0.0 | -4.14 | 0.41 | 0.74 | 4.76 | 3.4 | 0.006 | 0.87 | 0.0 | 0.05 | 14.02 | 0.00 | 2.101 | 15.37 | 0.62 | 14.7 | 85.3 | 0.0 | -4.64 | 1.75 | 0.44 | 0.77 | 4.96 | 2958 | 396 | 12 | 0 | 0 | 0 | 0 | logfile |
✔ | 6Y1A | 10669 | 2023-02-17 | 2020-02-11 | 4.2 | 3.60 | 1.84 | 4.3 | 0.005 | 1.09 | 0.0 | 0.07 | 9.42 | 0.00 | 2.509 | 15.01 | 0.00 | 4.3 | 95.7 | 0.0 | -4.99 | 0.53 | 0.63 | — | 4.2 | 0.005 | 0.75 | 0.0 | 0.04 | 11.01 | 0.00 | 2.047 | 15.36 | 0.00 | 9.8 | 90.2 | 0.0 | -4.85 | 1.54 | 0.57 | 0.75 | — | 2960 | 400 | 32 | 0 | 16 | 0 | 0 | logfile |
✔ | 7YL7 | 33903 | 2023-02-17 | 2022-07-25 | 3.3 | 3.54 | 3.17 | 3.5 | 0.004 | 1.05 | 0.0 | 0.04 | 11.58 | 0.00 | 2.196 | 22.56 | 0.00 | 4.9 | 95.1 | 0.0 | -5.16 | 0.45 | 0.78 | 4.82 | 3.4 | 0.006 | 0.69 | 0.0 | 0.05 | 13.21 | 0.00 | 2.149 | 8.89 | 0.31 | 12.0 | 88.0 | 0.0 | -5.07 | 0.83 | 0.44 | 0.78 | 5.15 | 2988 | 402 | 12 | 0 | 0 | 0 | 0 | logfile |
✔ | 7QEU | 13941 | 2023-02-17 | 2021-12-03 | 2.7 | 3.39 | — | 3.0 | 0.009 | 0.68 | 0.0 | 0.04 | 13.62 | 0.00 | 2.135 | 3.49 | 0.00 | 2.6 | 97.4 | 0.0 | 0.76 | 0.78 | 0.87 | 3.01 | 3.0 | 0.003 | 0.55 | 0.0 | 0.04 | 15.06 | 0.00 | 2.167 | 4.16 | 1.55 | 2.0 | 98.0 | 0.0 | 3.32 | 0.41 | 0.79 | 0.88 | 2.56 | 3002 | 359 | 6 | 0 | 6 | 7 | 0 | logfile |
✔ | 7K45 | 22660 | 2023-02-17 | 2020-09-14 | 3.7 | 3.90 | 3.76 | 3.9 | 0.014 | 1.41 | 0.0 | 0.08 | 9.47 | 0.01 | 2.568 | 0.35 | 0.00 | 2.2 | 97.8 | 0.0 | 0.92 | 0.79 | 0.78 | 4.02 | 3.9 | 0.004 | 0.70 | 0.0 | 0.05 | 14.21 | 0.01 | 2.379 | 9.20 | 0.00 | 3.6 | 96.4 | 0.0 | 0.20 | 1.30 | 0.81 | 0.81 | 2.76 | 3038 | 419 | 4 | 0 | 2 | 0 | 0 | logfile |
✔ | 7QEo | 13935 | 2023-02-17 | 2021-12-03 | 2.9 | 3.47 | — | 3.1 | 0.008 | 0.69 | 0.0 | 0.04 | 13.62 | 0.00 | 2.106 | 5.39 | 0.00 | 3.9 | 96.1 | 0.0 | 0.61 | 0.78 | 0.88 | 3.13 | 3.1 | 0.003 | 0.64 | 0.0 | 0.04 | 15.53 | 0.00 | 2.191 | 6.69 | 0.61 | 2.5 | 97.5 | 0.0 | 2.85 | 0.47 | 0.77 | 0.88 | 2.74 | 3056 | 368 | 6 | 0 | 6 | 4 | 0 | logfile |
✔ | 7FiJ | 31599 | 2023-02-17 | 2021-07-31 | 3.8 | 2.32 | — | 1.8 | 0.001 | 0.41 | 0.0 | 0.04 | 8.02 | 0.00 | 2.344 | 3.95 | 0.00 | 4.1 | 95.9 | 0.0 | 1.10 | 0.58 | 0.50 | 3.05 | 1.6 | 0.003 | 0.71 | 0.0 | 0.04 | 10.87 | 0.00 | 2.234 | 8.95 | 1.25 | 10.6 | 89.4 | 0.0 | -0.78 | 0.63 | 0.60 | 0.54 | 2.95 | 3061 | 561 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 7E39 | 30977 | 2023-02-17 | 2021-02-08 | 3.7 | 3.11 | — | 2.9 | 0.005 | 0.76 | 0.0 | 0.05 | 14.34 | 0.01 | 2.130 | 15.98 | 0.00 | 10.1 | 89.9 | 0.0 | -3.52 | 0.50 | 0.74 | 2.30 | 2.9 | 0.004 | 0.68 | 0.0 | 0.05 | 16.01 | 0.00 | 2.177 | 13.75 | 0.68 | 8.9 | 91.1 | 0.0 | -2.55 | 0.42 | 0.50 | 0.75 | 2.09 | 3074 | 414 | 4 | 0 | 1 | 0 | 0 | logfile |
✔ | 7QES | 13939 | 2023-02-17 | 2021-12-03 | 2.6 | 3.37 | — | 3.0 | 0.009 | 0.66 | 0.0 | 0.04 | 13.87 | 0.00 | 2.122 | 3.25 | 0.00 | 3.9 | 96.1 | 0.0 | -0.99 | 0.77 | 0.86 | 3.39 | 3.0 | 0.003 | 0.61 | 0.0 | 0.04 | 15.44 | 0.00 | 2.157 | 4.06 | 0.91 | 3.6 | 96.4 | 0.0 | 2.59 | 1.24 | 0.78 | 0.86 | 2.82 | 3076 | 366 | 6 | 0 | 10 | 14 | 0 | logfile |
✔ | 6X0U | 21984 | 2023-02-17 | 2020-05-17 | 3.6 | 3.62 | — | 3.6 | 0.004 | 0.62 | 0.0 | 0.04 | 14.50 | 0.00 | 2.277 | 5.74 | 0.00 | 3.7 | 96.1 | 0.3 | -5.79 | 0.26 | 0.78 | 1.89 | 3.6 | 0.002 | 0.69 | 0.0 | 0.04 | 17.79 | 0.00 | 2.197 | 7.98 | 0.29 | 3.2 | 96.8 | 0.0 | 1.27 | 0.82 | 0.27 | 0.79 | 2.52 | 3091 | 398 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 6V4D | 21040 | 2023-02-17 | 2019-11-27 | 3.8 | 4.13 | — | 4.1 | 0.007 | 0.90 | 0.0 | 0.06 | 13.63 | 0.01 | 1.752 | 21.24 | 1.35 | 7.0 | 93.0 | 0.0 | -3.84 | 0.49 | 0.80 | 2.10 | 4.1 | 0.003 | 0.85 | 0.0 | 0.04 | 16.59 | 0.00 | 2.082 | 12.48 | 0.68 | 5.3 | 94.7 | 0.0 | -0.62 | 0.65 | 0.47 | 0.78 | 1.50 | 3095 | 422 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 5Lii | 4053 | 2023-02-15 | 2016-07-14 | 3.8 | 2.99 | — | 3.9 | 0.015 | 2.41 | 6.0 | 0.14 | 12.69 | 0.01 | 1.855 | 42.83 | 1.41 | 16.9 | 81.9 | 1.2 | -6.10 | 0.55 | 0.70 | 3.46 | 3.8 | 0.003 | 0.88 | 0.0 | 0.04 | 15.96 | 0.01 | 2.201 | 13.15 | 1.41 | 14.6 | 84.7 | 0.7 | -4.22 | 0.87 | 0.56 | 0.67 | 1.49 | 3098 | 433 | 1 | 0 | 0 | 0 | 0 | logfile |