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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✘ | 7P06 | 13145 | 2022-07-05 | 2021-06-29 | 3.77 | 4.42 | — | 4.0 | 0.005 | 0.71 | 0.0 | 0.04 | 13.79 | 0.01 | 1.299 | 9.20 | 0.00 | 5.5 | 94.5 | 0.0 | -0.50 | 0.71 | 0.77 | 2.52 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 21476 | 1350 | 1 | 0 | 3 | 0 | 10638 | logfile |
✘ | 7S9Z | 24942 | 2022-07-03 | 2021-09-21 | 4.14 | 4.38 | — | 4.3 | 0.006 | 0.81 | 1.0 | 0.04 | 13.12 | 0.00 | 1.246 | 10.18 | 0.00 | 10.6 | 89.4 | 0.0 | -2.53 | 0.66 | 0.77 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 7274 | 890 | 1 | 0 | 2 | 0 | 0 | logfile |
✔ | 6XMS | 22262 | 2022-07-03 | 2020-06-30 | 3.4 | 4.03 | 3.50 | 3.8 | 0.006 | 1.18 | 0.0 | 0.04 | 12.68 | 0.00 | 1.862 | 6.08 | 0.00 | 4.6 | 95.4 | 0.0 | -2.39 | 0.74 | 0.87 | 2.45 | 3.8 | 0.003 | 0.56 | 0.0 | 0.04 | 14.25 | 0.00 | 1.831 | 4.83 | 0.11 | 3.9 | 96.1 | 0.0 | 0.14 | 0.36 | 0.74 | 0.89 | 1.89 | 8389 | 1091 | 1 | 0 | 2 | 0 | 0 | logfile |
✔ | 7ASK | 11895 | 2022-07-03 | 2020-10-27 | 4.3 | 4.39 | — | 4.3 | 0.028 | 2.98 | 47.0 | 0.22 | 18.83 | 0.02 | 0.766 | 14.61 | 2.58 | 16.8 | 73.5 | 9.7 | -6.06 | 0.17 | 0.51 | — | 4.3 | 0.021 | 1.28 | 3.0 | 0.05 | 15.61 | 0.01 | 1.982 | 20.29 | 0.00 | 19.5 | 78.9 | 1.6 | -3.52 | 1.30 | 0.19 | 0.61 | — | 12285 | 1523 | 1 | 0 | 2 | 0 | 0 | logfile |
✘ | 7S9Y | 24941 | 2022-07-03 | 2021-09-21 | 3.56 | 3.89 | — | 3.9 | 0.007 | 0.93 | 0.0 | 0.05 | 13.74 | 0.01 | 1.241 | 10.16 | 0.00 | 8.2 | 91.8 | 0.0 | -1.32 | 0.69 | 0.82 | 3.05 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 7395 | 901 | 1 | 0 | 3 | 0 | 0 | logfile |
✔ | 7NUR | 12600 | 2022-07-03 | 2021-03-13 | 3.125 | 3.29 | — | 3.3 | 0.007 | 0.77 | 0.0 | 0.05 | 14.31 | 0.01 | 2.174 | 5.26 | 0.11 | 7.7 | 92.0 | 0.3 | -4.11 | 0.77 | 0.87 | 3.09 | 3.3 | 0.008 | 0.85 | 0.0 | 0.04 | 16.08 | 0.01 | 2.199 | 4.47 | 0.11 | 7.2 | 92.7 | 0.1 | -0.64 | 0.96 | 0.76 | 0.87 | 2.23 | 8245 | 1044 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 6XMP | 22260 | 2022-07-03 | 2020-06-30 | 3.5 | 4.29 | 3.63 | 4.0 | 0.005 | 0.54 | 0.0 | 0.04 | 13.08 | 0.00 | 2.192 | 6.56 | 0.00 | 2.9 | 97.1 | 0.0 | -1.66 | 0.72 | 0.84 | 1.55 | 4.0 | 0.003 | 0.53 | 0.0 | 0.04 | 14.38 | 0.00 | 2.153 | 6.73 | 0.11 | 3.3 | 96.7 | 0.0 | 1.03 | 0.35 | 0.71 | 0.85 | 1.45 | 8545 | 1086 | 1 | 0 | 12 | 0 | 0 | logfile |
✔ | 7ADM | 11731 | 2022-07-03 | 2020-09-15 | 3.5 | 3.77 | 3.57 | 3.8 | 0.013 | 1.98 | 3.0 | 0.11 | 15.37 | 0.02 | 2.582 | 0.10 | 0.73 | 11.9 | 88.1 | 0.0 | -2.91 | 0.49 | 0.70 | 2.46 | 3.8 | 0.018 | 1.28 | 1.0 | 0.04 | 16.62 | 0.00 | 2.082 | 11.00 | 0.37 | 9.3 | 90.7 | 0.0 | -2.11 | 1.82 | 0.49 | 0.70 | 2.23 | 9726 | 614 | 1 | 0 | 0 | 0 | 4799 | logfile |
✔ | 7ADJ | 11727 | 2022-07-03 | 2020-09-15 | 2.8 | 3.02 | 2.79 | 3.0 | 0.014 | 1.99 | 4.0 | 0.11 | 14.68 | 0.01 | 2.562 | 0.51 | 0.18 | 6.9 | 93.1 | 0.0 | -2.18 | 0.34 | 0.70 | 3.50 | 3.0 | 0.003 | 0.71 | 0.0 | 0.04 | 17.21 | 0.00 | 2.143 | 6.49 | 2.39 | 6.5 | 93.5 | 0.0 | -1.05 | 1.26 | 0.41 | 0.77 | 2.89 | 9710 | 613 | 1 | 0 | 0 | 0 | 4790 | logfile |
✔ | 6ZH4 | 11213 | 2022-07-06 | 2020-06-20 | 3.62 | 4.39 | 3.75 | 4.0 | 0.005 | 0.69 | 0.0 | 0.04 | 14.48 | 0.00 | 2.199 | 14.55 | 0.03 | 7.6 | 92.4 | 0.0 | -0.76 | 0.89 | 0.87 | 1.88 | 4.0 | 0.003 | 0.64 | 0.0 | 0.04 | 15.79 | 0.00 | 2.141 | 11.28 | 0.22 | 5.9 | 94.1 | 0.0 | 0.53 | 0.37 | 0.88 | 0.86 | 1.47 | 29352 | 3670 | 1 | 0 | 28 | 0 | 0 | logfile |
✔ | 7AWA | 11928 | 2022-07-03 | 2020-11-06 | 3.5 | 3.83 | — | 3.6 | 0.003 | 0.64 | 0.0 | 0.04 | 14.22 | 0.00 | 2.126 | 6.77 | 0.00 | 5.8 | 94.2 | 0.0 | -2.52 | 0.57 | 0.81 | 2.14 | 3.6 | 0.002 | 0.53 | 0.0 | 0.04 | 14.89 | 0.00 | 2.160 | 6.39 | 0.00 | 2.8 | 97.2 | 0.0 | -0.31 | 1.17 | 0.54 | 0.80 | 1.47 | 5310 | 328 | 1 | 0 | 0 | 0 | 2703 | logfile |
✔ | 6ZH2 | 11211 | 2022-07-06 | 2020-06-20 | 3.92 | 4.42 | 3.96 | 4.0 | 0.003 | 0.66 | 0.0 | 0.04 | 14.54 | 0.00 | 2.169 | 15.77 | 0.06 | 7.8 | 92.1 | 0.1 | -0.24 | 0.88 | 0.86 | 1.25 | 4.0 | 0.003 | 0.68 | 0.0 | 0.04 | 15.89 | 0.00 | 2.189 | 13.57 | 0.09 | 6.0 | 93.9 | 0.0 | 0.27 | 1.50 | 0.87 | 0.86 | 1.08 | 29313 | 3676 | 1 | 0 | 28 | 0 | 0 | logfile |
✔ | 6YNV | 10857 | 2022-07-03 | 2020-04-14 | 2.8 | 3.33 | 2.74 | 3.2 | 0.014 | 0.90 | 0.0 | 0.06 | 15.71 | 0.01 | 2.129 | 6.07 | 1.67 | 6.0 | 94.0 | 0.0 | -3.24 | 0.64 | 0.88 | 5.38 | 3.2 | 0.004 | 0.55 | 0.0 | 0.04 | 15.81 | 0.00 | 2.217 | 2.67 | 0.28 | 5.5 | 94.5 | 0.0 | 0.31 | 1.16 | 0.64 | 0.90 | 5.15 | 6724 | 417 | 1 | 0 | 1 | 0 | 3285 | logfile |
✔ | 7LQ6 | 23482 | 2022-07-03 | 2021-02-13 | 3.28 | 4.07 | 3.16 | 3.5 | 0.005 | 0.76 | 0.0 | 0.05 | 15.77 | 0.00 | 1.549 | 9.45 | 1.41 | 5.5 | 94.4 | 0.2 | -4.83 | 0.90 | 0.85 | 3.36 | 3.5 | 0.003 | 0.64 | 0.0 | 0.04 | 16.28 | 0.01 | 2.138 | 7.18 | 0.00 | 3.6 | 96.4 | 0.0 | 0.12 | 1.01 | 0.91 | 0.87 | 1.78 | 5267 | 672 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 6ZFP | 11185 | 2022-07-06 | 2020-06-17 | 3.24 | 3.95 | 3.34 | 3.7 | 0.006 | 0.70 | 0.0 | 0.05 | 14.34 | 0.00 | 2.198 | 11.16 | 0.12 | 8.4 | 91.5 | 0.1 | -1.19 | 0.83 | 0.83 | 1.85 | 3.7 | 0.003 | 0.62 | 0.0 | 0.04 | 15.66 | 0.00 | 2.198 | 8.40 | 0.19 | 6.3 | 93.7 | 0.1 | 0.32 | 0.77 | 0.80 | 0.78 | 1.32 | 29385 | 3676 | 1 | 0 | 28 | 0 | 0 | logfile |
✔ | 7B52 | 12017 | 2022-07-03 | 2020-12-03 | 3.8 | 4.98 | — | 3.9 | 0.004 | 0.84 | 0.0 | 0.04 | 14.20 | 0.00 | 2.035 | 24.55 | 0.07 | 16.4 | 83.4 | 0.2 | -2.23 | 0.83 | 0.84 | 0.97 | 3.9 | 0.003 | 0.71 | 0.0 | 0.04 | 15.15 | 0.00 | 2.122 | 16.66 | 0.14 | 12.8 | 87.1 | 0.1 | -1.32 | 0.92 | 0.82 | 0.83 | 0.66 | 13186 | 1638 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 6XMQ | 22261 | 2022-07-03 | 2020-06-30 | 3.7 | 4.26 | 3.79 | 4.0 | 0.006 | 0.66 | 0.0 | 0.04 | 12.80 | 0.00 | 1.660 | 6.11 | 0.00 | 3.7 | 96.3 | 0.0 | -1.63 | 0.72 | 0.85 | 1.50 | 4.0 | 0.002 | 0.55 | 0.0 | 0.04 | 14.84 | 0.00 | 2.024 | 6.53 | 0.11 | 2.5 | 97.5 | 0.0 | 0.89 | 1.28 | 0.72 | 0.85 | 1.27 | 8362 | 1085 | 1 | 0 | 2 | 0 | 0 | logfile |
✔ | 6XMT | 22263 | 2022-07-03 | 2020-06-30 | 3.3 | 3.96 | 3.42 | 3.7 | 0.004 | 0.61 | 0.0 | 0.04 | 12.44 | 0.00 | 1.814 | 7.30 | 0.00 | 4.5 | 95.5 | 0.0 | -2.38 | 0.72 | 0.82 | 2.61 | 3.8 | 0.003 | 0.55 | 0.0 | 0.04 | 14.15 | 0.00 | 1.887 | 6.03 | 0.23 | 4.3 | 95.7 | 0.0 | 0.38 | 0.40 | 0.72 | 0.86 | 1.91 | 8324 | 1092 | 1 | 0 | 2 | 0 | 0 | logfile |
✔ | 7MPE | 23932 | 2022-07-03 | 2021-05-04 | 3.2 | 3.91 | — | 3.8 | 0.005 | 0.69 | 0.0 | 0.04 | 14.10 | 0.00 | 2.174 | 14.70 | 0.00 | 6.9 | 93.1 | 0.0 | -2.52 | 0.62 | 0.77 | 2.09 | 3.8 | 0.003 | 0.63 | 0.0 | 0.04 | 15.98 | 0.00 | 2.088 | 11.77 | 0.25 | 5.4 | 94.6 | 0.0 | -0.64 | 1.11 | 0.62 | 0.77 | 1.29 | 11214 | 1428 | 1 | 0 | 0 | 0 | 0 | logfile |
✘ | 7oTW | 13068 | 2022-07-06 | 2021-06-10 | 2.99 | 3.85 | — | 3.2 | 0.009 | 0.94 | 0.0 | 0.05 | 14.13 | 0.01 | 1.219 | 16.27 | 0.28 | 10.0 | 89.9 | 0.2 | -2.30 | 0.80 | 0.71 | 1.78 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 29038 | 3636 | 1 | 0 | 21 | 0 | 0 | logfile |