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Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 8UPT | 42455 | 2024-03-10 | 2023-10-23 | 2.8 | 3.38 | 2.84 | 2.9 | 0.016 | 2.20 | 0.0 | 0.16 | 30.45 | 0.01 | 1.072 | 99.56 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.23 | 0.59 | — | 2.9 | 0.005 | 0.73 | 0.0 | 0.04 | 27.91 | 0.01 | 2.113 | 22.27 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.95 | 0.28 | 0.87 | — | 1518 | 0 | 1 | 71 | 0 | 0 | 0 | logfile |
✔ | 7R9E | 24324 | 2024-03-11 | 2021-06-29 | 4.0 | 4.83 | — | 3.9 | 0.002 | 0.37 | 0.0 | 0.04 | 4.45 | 0.00 | 2.277 | 3.11 | 0.00 | 9.9 | 88.7 | 1.4 | -3.58 | 0.87 | 0.80 | — | 3.9 | 0.003 | 0.59 | 0.0 | 0.04 | 9.14 | 0.00 | 2.120 | 9.84 | 0.98 | 5.4 | 94.6 | 0.0 | -0.26 | 2.08 | 0.88 | 0.82 | — | 7726 | 505 | 1 | 0 | 0 | 0 | 3938 | logfile |
✔ | 7R1Y | 14243 | 2024-03-10 | 2022-02-03 | 3.0 | 3.01 | 2.95 | 3.0 | 0.002 | 0.52 | 0.0 | 0.04 | 13.13 | 0.00 | 2.252 | 6.47 | 3.44 | 2.9 | 97.1 | 0.0 | 0.36 | 0.72 | 0.71 | 2.29 | 3.0 | 0.003 | 0.59 | 0.0 | 0.04 | 16.24 | 0.00 | 2.118 | 13.02 | 3.29 | 3.7 | 96.3 | 0.0 | 1.14 | 1.12 | 0.73 | 0.73 | 2.12 | 5704 | 723 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 6PZi | 20535 | 2024-03-11 | 2019-07-31 | 4.5 | 4.80 | — | 4.4 | 0.005 | 1.13 | 0.0 | 0.05 | 9.01 | 0.01 | 2.253 | 2.60 | 0.00 | 6.3 | 93.7 | 0.0 | -3.83 | 0.67 | 0.80 | — | 4.4 | 0.002 | 0.65 | 0.0 | 0.04 | 8.28 | 0.00 | 2.162 | 5.20 | 0.00 | 3.1 | 96.9 | 0.0 | 2.16 | 0.55 | 0.68 | 0.83 | — | 7985 | 1412 | 1 | 0 | 1 | 0 | 0 | logfile |
✔ | 6WU0 | 21901 | 2024-03-11 | 2020-05-04 | 3.59 | 3.92 | — | 3.9 | 0.003 | 0.65 | 0.0 | 0.04 | 13.43 | 0.00 | 2.211 | 10.57 | 0.00 | 6.0 | 94.0 | 0.0 | -1.89 | 0.56 | 0.63 | 0.78 | 3.9 | 0.004 | 0.78 | 0.0 | 0.04 | 15.68 | 0.01 | 2.164 | 12.80 | 3.20 | 7.6 | 92.4 | 0.0 | 0.14 | 0.50 | 0.54 | 0.64 | 0.62 | 6340 | 854 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 7R9U | 24331 | 2024-03-11 | 2021-06-29 | 4.4 | 5.41 | — | 4.3 | 0.002 | 0.34 | 0.0 | 0.04 | 4.36 | 0.00 | 2.248 | 3.50 | 0.00 | 9.1 | 90.3 | 0.6 | -4.49 | 0.78 | 0.62 | — | 4.3 | 0.003 | 0.52 | 0.0 | 0.04 | 8.28 | 0.00 | 1.920 | 9.32 | 0.00 | 3.4 | 96.6 | 0.0 | 0.39 | 2.36 | 0.91 | 0.84 | — | 7727 | 505 | 1 | 0 | 0 | 0 | 3939 | logfile |
✔ | 3J9D | 6239 | 2024-03-10 | 2015-01-09 | 3.3 | 2.70 | — | 3.4 | 0.027 | 2.04 | 0.0 | 0.08 | 20.57 | 0.01 | 2.034 | 23.66 | 24.92 | 8.2 | 89.6 | 2.2 | -3.64 | 0.81 | 0.89 | 2.90 | 3.3 | 0.022 | 0.82 | 0.0 | 0.04 | 17.81 | 0.00 | 2.186 | 15.94 | 5.11 | 6.7 | 92.7 | 0.5 | -1.39 | 2.36 | 0.75 | 0.84 | 2.66 | 6086 | 746 | 1 | 0 | 1 | 0 | 0 | logfile |
✔ | 7ZZ0 | 15030 | 2024-03-10 | 2022-05-25 | 2.26 | 2.63 | 2.22 | 2.1 | 0.004 | 0.71 | 0.0 | 0.05 | 16.82 | 0.00 | 2.149 | 3.28 | 1.96 | 1.9 | 98.1 | 0.0 | -0.34 | 0.92 | 0.91 | 4.41 | 2.1 | 0.003 | 0.51 | 0.0 | 0.04 | 16.65 | 0.00 | 2.110 | 4.91 | 2.18 | 1.5 | 98.5 | 0.0 | 1.22 | 0.19 | 0.92 | 0.91 | 4.73 | 4387 | 541 | 1 | 0 | 2 | 84 | 0 | logfile |
✔ | 8FEH | 29027 | 2024-03-10 | 2022-12-06 | 3.28 | 4.31 | 3.36 | 3.4 | 0.008 | 1.02 | 0.0 | 0.07 | 14.17 | 0.01 | 2.317 | 7.23 | 1.83 | 7.1 | 92.9 | 0.0 | -3.45 | 0.45 | 0.76 | 1.53 | 3.5 | 0.003 | 0.62 | 0.0 | 0.04 | 15.12 | 0.00 | 2.251 | 10.73 | 0.46 | 4.9 | 95.1 | 0.0 | -1.23 | 2.58 | 0.47 | 0.88 | 2.23 | 1993 | 268 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 6UWL | 20923 | 2024-03-10 | 2019-11-05 | 3.62 | 3.73 | — | 3.7 | 0.008 | 1.16 | 0.0 | 0.06 | 16.85 | 0.01 | 2.303 | 6.24 | 0.00 | 7.6 | 92.2 | 0.3 | -4.71 | 0.67 | 0.82 | 1.71 | 3.7 | 0.004 | 0.74 | 0.0 | 0.04 | 16.60 | 0.00 | 2.189 | 14.41 | 4.46 | 5.8 | 94.2 | 0.0 | 0.06 | 0.52 | 0.66 | 0.81 | 1.34 | 3029 | 402 | 1 | 0 | 1 | 0 | 0 | logfile |
✔ | 7VV6 | 32139 | 2024-03-10 | 2021-11-04 | 3.3 | 3.47 | — | 3.5 | 0.010 | 1.38 | 0.0 | 0.07 | 19.05 | 0.01 | 2.291 | 4.89 | 10.37 | 5.2 | 94.8 | 0.0 | -4.22 | 0.62 | 0.83 | 1.64 | 3.4 | 0.003 | 0.58 | 0.0 | 0.04 | 16.46 | 0.00 | 2.189 | 6.66 | 3.73 | 2.2 | 97.8 | 0.0 | 3.08 | 0.66 | 0.65 | 0.86 | 1.99 | 2227 | 271 | 1 | 0 | 2 | 0 | 0 | logfile |
✔ | 6WYK | 21967 | 2024-03-10 | 2020-05-13 | 4.0 | 4.14 | — | 4.2 | 0.007 | 0.77 | 0.0 | 0.05 | 11.98 | 0.00 | 2.223 | 5.97 | 0.00 | 3.4 | 96.6 | 0.0 | -2.28 | 0.62 | 0.77 | — | 4.2 | 0.004 | 0.77 | 0.0 | 0.04 | 16.10 | 0.00 | 2.204 | 10.05 | 4.29 | 1.9 | 98.1 | 0.0 | 2.01 | 0.80 | 0.62 | 0.78 | — | 3083 | 415 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 5LiJ | 4054 | 2024-03-10 | 2016-07-14 | 4.2 | 3.63 | — | 4.2 | 0.009 | 2.92 | 4.0 | 0.17 | 15.82 | 0.01 | 2.249 | 25.64 | 0.00 | 10.7 | 89.3 | 0.0 | -6.36 | 0.85 | 0.76 | — | 3.8 | 0.005 | 1.17 | 0.0 | 0.04 | 10.44 | 0.00 | 2.149 | 15.78 | 0.00 | 35.3 | 64.7 | 0.0 | -5.53 | 1.48 | 0.86 | 0.78 | — | 761 | 152 | 1 | 0 | 0 | 0 | 0 | logfile |
✘ | 5Lii | 4053 | 2024-03-10 | 2016-07-14 | 3.8 | 2.99 | — | 3.9 | 0.015 | 2.41 | 6.0 | 0.14 | 12.69 | 0.01 | 1.855 | 42.83 | 1.41 | 16.9 | 81.9 | 1.2 | -6.10 | 0.55 | 0.70 | 3.46 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 3098 | 433 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 3J9E | 6240 | 2024-03-10 | 2015-01-10 | 3.3 | 2.66 | — | 3.3 | 0.032 | 3.28 | 0.0 | 0.09 | 21.31 | 0.02 | 1.223 | 20.81 | 24.26 | 9.8 | 87.3 | 2.9 | -3.41 | 0.77 | 0.88 | 3.26 | 3.3 | 0.004 | 0.77 | 0.0 | 0.04 | 17.77 | 0.00 | 2.236 | 10.82 | 4.58 | 7.8 | 91.7 | 0.6 | 0.72 | 1.59 | 0.73 | 0.86 | 3.06 | 4098 | 520 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 6MG8 | 9111 | 2024-03-11 | 2018-09-13 | 3.6 | 3.81 | 3.42 | 3.7 | 0.006 | 0.75 | 0.0 | 0.06 | 12.86 | 0.00 | 2.157 | 8.79 | 0.00 | 8.0 | 92.0 | 0.0 | -3.49 | 0.71 | 0.81 | 2.44 | 3.7 | 0.004 | 0.69 | 0.0 | 0.04 | 14.13 | 0.00 | 2.179 | 9.60 | 4.20 | 7.4 | 92.6 | 0.0 | -0.20 | 0.44 | 0.72 | 0.81 | 2.53 | 7034 | 985 | 1 | 0 | 4 | 0 | 0 | logfile |
✔ | 6WYJ | 21966 | 2024-03-10 | 2020-05-13 | 3.7 | 3.74 | — | 3.8 | 0.010 | 0.64 | 0.0 | 0.05 | 12.33 | 0.00 | 2.268 | 5.08 | 0.00 | 5.3 | 94.7 | 0.0 | -4.80 | 0.59 | 0.78 | 4.37 | 3.8 | 0.003 | 0.62 | 0.0 | 0.04 | 14.60 | 0.00 | 2.249 | 5.08 | 2.56 | 1.5 | 98.5 | 0.0 | 1.79 | 0.58 | 0.64 | 0.81 | 1.65 | 2949 | 398 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 6oUC | 20202 | 2024-03-10 | 2019-05-04 | 2.8 | 3.00 | — | 3.0 | 0.008 | 1.15 | 1.0 | 0.08 | 9.03 | 0.01 | 2.131 | 6.96 | 0.00 | 3.5 | 96.5 | 0.0 | -2.32 | 0.62 | 0.88 | 5.44 | 3.0 | 0.003 | 0.57 | 0.0 | 0.05 | 14.25 | 0.01 | 2.212 | 3.88 | 2.40 | 2.9 | 97.1 | 0.0 | -0.35 | 1.17 | 0.65 | 0.90 | 3.86 | 3899 | 483 | 1 | 0 | 1 | 124 | 0 | logfile |
✔ | 7A8P | 11679 | 2024-03-11 | 2020-08-30 | 3.5 | 3.61 | 3.44 | 3.6 | 0.004 | 0.53 | 0.0 | 0.03 | 16.13 | 0.00 | 2.165 | 2.86 | 0.63 | 2.2 | 97.8 | 0.0 | 0.97 | 0.73 | 0.78 | 1.97 | 3.5 | 0.005 | 0.62 | 0.0 | 0.04 | 17.03 | 0.01 | 2.085 | 9.48 | 2.78 | 2.1 | 97.9 | 0.0 | 2.23 | 0.49 | 0.74 | 0.80 | 2.21 | 7305 | 911 | 1 | 0 | 1 | 0 | 0 | logfile |
✔ | 6X13 | 21987 | 2024-03-10 | 2020-05-18 | 3.66 | 3.77 | — | 3.8 | 0.007 | 1.04 | 1.0 | 0.05 | 16.90 | 0.01 | 2.340 | 4.80 | 0.31 | 6.5 | 93.5 | 0.0 | -3.73 | 0.64 | 0.84 | 1.86 | 3.8 | 0.004 | 0.67 | 0.0 | 0.04 | 16.22 | 0.01 | 2.235 | 9.29 | 1.54 | 5.3 | 94.7 | 0.0 | 1.59 | 0.42 | 0.64 | 0.84 | 1.50 | 3136 | 417 | 1 | 0 | 1 | 0 | 0 | logfile |