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Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 8PD5 | 17601 | 2023-12-08 | 2023-06-11 | 3.4 | 2.30 | 3.32 | 2.1 | 0.003 | 0.53 | 0.0 | 0.04 | 13.12 | 0.00 | 2.148 | 2.18 | 0.00 | 2.2 | 97.8 | 0.0 | 1.83 | 0.61 | 0.77 | 2.43 | 2.1 | 0.003 | 0.58 | 0.0 | 0.04 | 15.92 | 0.00 | 2.252 | 5.39 | 0.46 | 1.8 | 98.2 | 0.0 | 2.41 | 1.01 | 0.68 | 0.81 | 2.13 | 8093 | 1024 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 3J9D | 6239 | 2023-12-08 | 2015-01-09 | 3.3 | 2.70 | — | 3.4 | 0.027 | 2.04 | 0.0 | 0.08 | 20.57 | 0.01 | 2.034 | 23.66 | 24.92 | 8.2 | 89.6 | 2.2 | -3.64 | 0.81 | 0.89 | 2.90 | 3.3 | 0.022 | 0.83 | 0.0 | 0.04 | 17.52 | 0.00 | 2.197 | 15.77 | 0.60 | 7.4 | 91.9 | 0.7 | -1.61 | 2.37 | 0.75 | 0.84 | 2.85 | 6086 | 746 | 1 | 0 | 1 | 0 | 0 | logfile |
✔ | 7ZZ5 | 15035 | 2023-12-07 | 2022-05-25 | 2.43 | 2.83 | 2.33 | 2.1 | 0.008 | 1.04 | 0.0 | 0.05 | 17.81 | 0.01 | 2.256 | 4.98 | 1.86 | 3.3 | 96.7 | 0.0 | -1.00 | 0.89 | 0.88 | 3.98 | 2.1 | 0.003 | 0.61 | 0.0 | 0.04 | 17.29 | 0.00 | 2.178 | 9.81 | 1.33 | 3.7 | 96.3 | 0.0 | 0.43 | 0.31 | 0.89 | 0.88 | 3.87 | 3633 | 461 | 1 | 0 | 2 | 0 | 0 | logfile |
✔ | 8JW4 | 36679 | 2023-12-09 | 2023-06-28 | 3.13 | 3.85 | 3.39 | 3.8 | 0.005 | 0.76 | 0.0 | 0.05 | 9.53 | 0.00 | 2.214 | 2.01 | 0.28 | 8.2 | 91.8 | 0.0 | -4.11 | 0.63 | 0.70 | 2.66 | 3.7 | 0.003 | 0.66 | 0.0 | 0.04 | 14.13 | 0.00 | 2.179 | 5.92 | 0.19 | 5.7 | 94.3 | 0.0 | -1.07 | 1.35 | 0.63 | 0.73 | 0.99 | 9582 | 1191 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 7LCK | 23276 | 2023-12-07 | 2021-01-11 | 3.24 | 3.84 | 3.15 | 3.6 | 0.008 | 1.05 | 4.0 | 0.07 | 14.39 | 0.01 | 2.160 | 7.79 | 1.16 | 6.7 | 93.3 | 0.0 | -0.93 | 0.69 | 0.79 | 2.21 | 3.7 | 0.003 | 0.62 | 0.0 | 0.04 | 15.11 | 0.00 | 2.253 | 4.36 | 0.58 | 3.9 | 96.1 | 0.0 | 0.89 | 0.56 | 0.65 | 0.78 | 1.88 | 3258 | 390 | 1 | 0 | 1 | 11 | 0 | logfile |
✔ | 7ZYZ | 15029 | 2023-12-07 | 2022-05-25 | 2.47 | 2.56 | 2.40 | 2.2 | 0.007 | 0.87 | 0.0 | 0.05 | 18.66 | 0.01 | 1.973 | 9.47 | 5.45 | 2.8 | 97.2 | 0.0 | -0.23 | 0.87 | 0.87 | 3.85 | 2.2 | 0.003 | 0.53 | 0.0 | 0.04 | 18.47 | 0.00 | 2.092 | 7.60 | 4.36 | 1.9 | 98.1 | 0.0 | 0.72 | 0.42 | 0.88 | 0.88 | 3.32 | 4349 | 541 | 1 | 0 | 2 | 38 | 0 | logfile |
✔ | 8SC1 | 40334 | 2023-12-07 | 2023-04-04 | 2.92 | 3.14 | 2.89 | 3.2 | 0.003 | 0.68 | 0.0 | 0.04 | 10.47 | 0.01 | 2.266 | 1.15 | 0.00 | 2.5 | 97.5 | 0.0 | -0.78 | 0.58 | 0.81 | 2.42 | 3.1 | 0.004 | 0.64 | 0.0 | 0.04 | 13.96 | 0.00 | 2.200 | 2.88 | 1.35 | 1.6 | 98.4 | 0.0 | 1.68 | 1.99 | 0.57 | 0.81 | 1.25 | 3447 | 446 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 6PZB | 20533 | 2023-12-08 | 2019-07-31 | 4.55 | 4.69 | — | 4.5 | 0.009 | 1.24 | 0.0 | 0.06 | 8.37 | 0.01 | 2.231 | 3.11 | 0.00 | 5.9 | 94.1 | 0.0 | -3.87 | 0.62 | 0.76 | — | 4.5 | 0.004 | 0.71 | 0.0 | 0.04 | 8.72 | 0.00 | 1.992 | 8.78 | 0.00 | 6.4 | 93.6 | 0.0 | 0.88 | 0.59 | 0.64 | 0.78 | — | 7747 | 1357 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 8EHW | 28153 | 2023-12-07 | 2022-09-14 | 3.8 | 4.10 | 3.62 | 4.0 | 0.006 | 0.97 | 1.0 | 0.05 | 16.57 | 0.01 | 2.239 | 16.20 | 0.18 | 8.3 | 91.7 | 0.0 | -0.97 | 0.58 | 0.76 | 1.15 | 4.0 | 0.003 | 0.85 | 0.0 | 0.04 | 16.90 | 0.00 | 2.201 | 17.46 | 0.00 | 5.4 | 94.6 | 0.0 | 0.39 | 0.67 | 0.58 | 0.76 | 1.24 | 5150 | 630 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 8EDN | 28037 | 2023-12-07 | 2022-09-05 | 3.8 | 3.47 | 3.75 | 3.3 | 0.002 | 0.58 | 0.0 | 0.04 | 11.31 | 0.00 | 2.205 | 6.81 | 0.46 | 5.7 | 94.1 | 0.2 | 2.77 | 0.65 | 0.60 | 0.13 | 3.3 | 0.003 | 0.68 | 0.0 | 0.04 | 13.45 | 0.00 | 2.166 | 10.99 | 0.46 | 5.3 | 94.5 | 0.2 | 2.27 | 1.13 | 0.70 | 0.72 | 1.53 | 3683 | 579 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 8FTK | 29439 | 2023-12-08 | 2023-01-12 | 4.56 | 5.56 | 4.86 | 4.4 | 0.002 | 0.58 | 0.0 | 0.04 | 4.66 | 0.00 | 2.125 | 4.21 | 0.00 | 5.9 | 94.1 | 0.0 | 0.74 | 0.85 | 0.81 | — | 4.4 | 0.003 | 0.55 | 0.0 | 0.04 | 4.49 | 0.00 | 2.164 | 4.30 | 0.00 | 8.2 | 91.8 | 0.0 | 0.75 | 1.24 | 0.86 | 0.82 | — | 7840 | 1584 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 7W7V | 32349 | 2023-12-08 | 2021-12-06 | 3.0 | 2.82 | 3.01 | 3.0 | 0.003 | 0.56 | 0.0 | 0.04 | 13.32 | 0.00 | 2.010 | 8.84 | 0.00 | 2.5 | 97.5 | 0.0 | 0.63 | 0.59 | 0.73 | 1.18 | 3.0 | 0.003 | 0.55 | 0.0 | 0.04 | 16.73 | 0.00 | 1.939 | 8.39 | 2.55 | 3.4 | 96.6 | 0.0 | -0.02 | 0.58 | 0.63 | 0.77 | 1.59 | 7823 | 1012 | 1 | 0 | 2 | 0 | 0 | logfile |
✔ | 8JHU | 36294 | 2023-12-08 | 2023-05-25 | 3.1 | 3.30 | 3.08 | 3.3 | 0.003 | 0.59 | 0.0 | 0.04 | 15.64 | 0.01 | 2.200 | 10.88 | 0.82 | 5.4 | 94.1 | 0.5 | -0.27 | 0.69 | 0.84 | 2.83 | 3.3 | 0.005 | 0.60 | 0.0 | 0.04 | 16.05 | 0.00 | 2.160 | 10.95 | 0.55 | 6.4 | 93.6 | 0.0 | 0.04 | 0.37 | 0.70 | 0.87 | 3.37 | 6554 | 811 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 8P51 | 17436 | 2023-12-09 | 2023-05-23 | 3.55 | 4.39 | 3.63 | 4.0 | 0.006 | 0.83 | 0.0 | 0.05 | 13.50 | 0.01 | 2.113 | 4.21 | 0.00 | 4.4 | 95.6 | 0.0 | -1.93 | 0.82 | 0.71 | 2.07 | 4.0 | 0.004 | 0.71 | 0.0 | 0.04 | 14.89 | 0.00 | 2.175 | 8.83 | 0.08 | 3.6 | 96.4 | 0.1 | 1.12 | 1.71 | 0.88 | 0.85 | 1.67 | 12389 | 1574 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 8QKK | 18464 | 2023-12-07 | 2023-09-15 | 3.23 | 3.44 | 3.28 | 3.6 | 0.002 | 0.49 | 0.0 | 0.04 | 14.14 | 0.00 | 2.132 | 9.00 | 0.00 | 2.9 | 97.1 | 0.0 | 2.28 | 0.62 | 0.79 | 1.22 | 3.6 | 0.004 | 0.66 | 0.0 | 0.04 | 15.84 | 0.00 | 2.254 | 10.33 | 0.00 | 2.3 | 97.7 | 0.0 | 1.79 | 0.79 | 0.65 | 0.81 | 1.05 | 5581 | 730 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 7E7S | 31003 | 2023-12-08 | 2021-02-27 | 3.3 | 3.32 | 3.27 | 3.4 | 0.003 | 0.50 | 0.0 | 0.04 | 14.41 | 0.00 | 2.166 | 8.26 | 0.00 | 2.6 | 97.4 | 0.0 | -0.13 | 0.68 | 0.82 | 1.44 | 3.3 | 0.002 | 0.53 | 0.0 | 0.04 | 15.91 | 0.00 | 2.219 | 8.70 | 0.00 | 3.3 | 96.7 | 0.0 | 1.42 | 1.29 | 0.66 | 0.82 | 0.60 | 7884 | 1020 | 1 | 0 | 2 | 0 | 0 | logfile |
✔ | 8TX1 | 41674 | 2023-12-10 | 2023-08-22 | 3.62 | 4.05 | 3.79 | 3.4 | 0.006 | 0.92 | 0.0 | 0.04 | 15.94 | 0.01 | 2.136 | 12.74 | 0.20 | 6.6 | 93.2 | 0.2 | 0.18 | 0.34 | 0.51 | 0.26 | 3.4 | 0.004 | 0.76 | 0.0 | 0.04 | 16.14 | 0.01 | 2.109 | 17.31 | 0.20 | 10.2 | 89.5 | 0.3 | -1.40 | 1.51 | 0.35 | 0.55 | 0.75 | 13687 | 1894 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 8EHX | 28154 | 2023-12-07 | 2022-09-14 | 3.6 | 3.90 | 3.67 | 3.9 | 0.005 | 0.80 | 0.0 | 0.05 | 17.02 | 0.01 | 2.214 | 13.59 | 0.00 | 8.5 | 91.3 | 0.2 | 0.14 | 0.58 | 0.79 | 0.78 | 3.9 | 0.003 | 0.70 | 0.0 | 0.04 | 17.64 | 0.01 | 2.258 | 10.41 | 0.36 | 7.9 | 92.0 | 0.2 | 1.05 | 1.52 | 0.56 | 0.78 | 0.94 | 5153 | 631 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 7XUN | 33475 | 2023-12-07 | 2022-05-19 | 3.4 | 3.91 | 3.41 | 3.8 | 0.002 | 0.57 | 0.0 | 0.04 | 13.72 | 0.00 | 2.129 | 11.02 | 0.00 | 4.1 | 95.9 | 0.0 | -0.92 | 0.72 | 0.76 | 0.33 | 3.8 | 0.003 | 0.72 | 0.0 | 0.05 | 15.95 | 0.00 | 2.159 | 12.95 | 0.33 | 4.9 | 95.1 | 0.0 | -0.13 | 1.11 | 0.72 | 0.77 | 0.22 | 5591 | 741 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 7PAG | 13269 | 2023-12-07 | 2021-07-29 | 4.0 | 4.22 | — | 4.1 | 0.005 | 0.75 | 0.0 | 0.05 | 13.81 | 0.01 | 2.177 | 12.66 | 0.00 | 6.3 | 93.7 | 0.0 | -1.70 | 0.30 | 0.60 | — | 4.2 | 0.006 | 1.13 | 0.0 | 0.06 | 16.44 | 0.01 | 2.132 | 22.28 | 0.68 | 13.3 | 86.7 | 0.0 | -3.67 | 1.35 | 0.34 | 0.69 | — | 4040 | 509 | 1 | 0 | 4 | 0 | 0 | logfile |