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Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 6XoW | 22282 | 2023-11-14 | 2020-07-07 | 4.6 | 8.17 | 4.40 | 7.0 | 0.006 | 1.00 | 0.0 | 0.05 | 13.39 | 0.01 | 1.991 | 24.14 | 0.23 | 4.2 | 95.8 | 0.0 | -0.98 | 0.87 | 0.72 | — | 7.0 | 0.003 | 0.72 | 0.0 | 0.04 | 13.41 | 0.00 | 2.180 | 17.36 | 0.23 | 3.1 | 96.9 | 0.0 | 0.65 | 0.79 | 0.91 | 0.81 | — | 7711 | 966 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 8H4U | 34484 | 2023-11-14 | 2022-10-11 | 3.5 | 3.38 | 3.50 | 3.4 | 0.002 | 0.59 | 0.0 | 0.04 | 18.36 | 0.00 | 2.218 | 8.59 | 1.28 | 5.1 | 94.9 | 0.0 | 0.05 | 0.75 | 0.82 | 1.33 | 3.4 | 0.003 | 0.58 | 0.0 | 0.04 | 18.41 | 0.00 | 2.187 | 8.96 | 0.12 | 5.8 | 94.2 | 0.0 | 1.77 | 1.02 | 0.74 | 0.82 | 0.62 | 7944 | 959 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 5Lii | 4053 | 2023-11-13 | 2016-07-14 | 3.8 | 2.99 | — | 3.9 | 0.015 | 2.41 | 6.0 | 0.14 | 12.69 | 0.01 | 1.855 | 42.83 | 1.41 | 16.9 | 81.9 | 1.2 | -6.10 | 0.55 | 0.70 | 3.46 | 3.8 | 0.003 | 0.88 | 0.0 | 0.04 | 15.96 | 0.01 | 2.201 | 13.15 | 1.41 | 14.6 | 84.7 | 0.7 | -4.22 | 0.87 | 0.56 | 0.67 | 1.49 | 3098 | 433 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 8CTJ | 26992 | 2023-11-13 | 2022-05-15 | 4.74 | 4.27 | 4.78 | 5.3 | 0.005 | 0.92 | 0.0 | 0.05 | 13.47 | 0.01 | 2.233 | 6.13 | 0.00 | 4.6 | 95.4 | 0.0 | -0.72 | 0.43 | 0.48 | — | 4.2 | 0.003 | 0.75 | 0.0 | 0.04 | 13.84 | 0.00 | 2.095 | 14.04 | 0.00 | 5.1 | 94.9 | 0.0 | -0.14 | 1.80 | 0.49 | 0.58 | — | 3312 | 401 | 1 | 0 | 1 | 0 | 0 | logfile |
✔ | 6LN5 | 0924 | 2023-11-14 | 2019-12-28 | 2.8 | 2.93 | 2.78 | 2.9 | 0.005 | 0.63 | 0.0 | 0.04 | 12.32 | 0.00 | 2.027 | 5.32 | 0.12 | 2.0 | 98.0 | 0.0 | -4.16 | 0.68 | 0.83 | 3.56 | 2.9 | 0.002 | 0.53 | 0.0 | 0.04 | 16.29 | 0.00 | 2.241 | 5.89 | 1.97 | 1.7 | 98.3 | 0.0 | 0.73 | 1.33 | 0.68 | 0.85 | 3.01 | 7840 | 1011 | 1 | 0 | 4 | 0 | 0 | logfile |
✔ | 8JHU | 36294 | 2023-11-14 | 2023-05-25 | 3.1 | 3.30 | 3.08 | 3.3 | 0.003 | 0.59 | 0.0 | 0.04 | 15.64 | 0.01 | 2.200 | 10.88 | 0.82 | 5.4 | 94.1 | 0.5 | -0.27 | 0.69 | 0.84 | 2.83 | 3.3 | 0.005 | 0.60 | 0.0 | 0.04 | 16.05 | 0.00 | 2.160 | 10.95 | 0.55 | 6.4 | 93.6 | 0.0 | 0.04 | 0.37 | 0.70 | 0.87 | 3.37 | 6554 | 811 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 5LiJ | 4054 | 2023-11-13 | 2016-07-14 | 4.2 | 3.63 | — | 4.2 | 0.009 | 2.92 | 4.0 | 0.17 | 15.82 | 0.01 | 2.249 | 25.64 | 0.00 | 10.7 | 89.3 | 0.0 | -6.36 | 0.85 | 0.76 | — | 3.8 | 0.005 | 1.17 | 0.0 | 0.04 | 10.44 | 0.00 | 2.149 | 15.78 | 0.00 | 35.3 | 64.7 | 0.0 | -5.53 | 1.48 | 0.86 | 0.78 | — | 761 | 152 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 7R1Y | 14243 | 2023-11-13 | 2022-02-03 | 3.0 | 3.01 | 2.95 | 3.0 | 0.002 | 0.52 | 0.0 | 0.04 | 13.13 | 0.00 | 2.252 | 6.47 | 3.44 | 2.9 | 97.1 | 0.0 | 0.36 | 0.72 | 0.71 | 2.29 | 3.0 | 0.003 | 0.61 | 0.0 | 0.04 | 16.45 | 0.00 | 2.104 | 13.37 | 3.13 | 4.0 | 96.0 | 0.0 | 0.97 | 1.13 | 0.74 | 0.74 | 2.05 | 5704 | 723 | 1 | 0 | 0 | 0 | 0 | logfile |
✘ | 5X1G | 6701 | 2023-11-13 | 2017-01-25 | 4.5 | 7.89 | — | 37.0 | 0.008 | 1.42 | 0.0 | 0.05 | 10.05 | 0.01 | 2.345 | 27.78 | 0.00 | 6.9 | 93.1 | 0.0 | -2.75 | 0.00 | 0.01 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 155 | 31 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 7PTX | 13642 | 2023-11-14 | 2021-09-27 | 4.03 | 4.17 | — | 3.9 | 0.003 | 0.76 | 0.0 | 0.05 | 14.08 | 0.01 | 2.202 | 19.18 | 0.00 | 10.6 | 89.4 | 0.0 | -1.97 | 0.84 | 0.72 | — | 3.9 | 0.003 | 0.77 | 0.0 | 0.04 | 14.49 | 0.00 | 2.255 | 17.66 | 0.00 | 9.0 | 91.0 | 0.0 | -1.21 | 0.49 | 0.85 | 0.73 | — | 7653 | 1000 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 8JW4 | 36679 | 2023-11-14 | 2023-06-28 | 3.13 | 3.85 | 3.39 | 3.8 | 0.005 | 0.76 | 0.0 | 0.05 | 9.53 | 0.00 | 2.214 | 2.01 | 0.28 | 8.2 | 91.8 | 0.0 | -4.11 | 0.63 | 0.70 | 2.66 | 3.7 | 0.003 | 0.66 | 0.0 | 0.04 | 14.13 | 0.00 | 2.179 | 5.92 | 0.19 | 5.7 | 94.3 | 0.0 | -1.07 | 1.35 | 0.63 | 0.73 | 0.99 | 9582 | 1191 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 7VV6 | 32139 | 2023-11-13 | 2021-11-04 | 3.3 | 3.47 | — | 3.5 | 0.010 | 1.38 | 0.0 | 0.07 | 19.04 | 0.01 | 2.291 | 4.89 | 10.37 | 5.2 | 94.8 | 0.0 | -4.22 | 0.62 | 0.83 | 1.64 | 3.4 | 0.004 | 0.65 | 0.0 | 0.04 | 17.06 | 0.00 | 2.195 | 6.88 | 0.00 | 3.3 | 96.7 | 0.0 | 2.95 | 0.67 | 0.65 | 0.86 | 1.49 | 2227 | 271 | 1 | 0 | 2 | 0 | 0 | logfile |
✔ | 6oUC | 20202 | 2023-11-13 | 2019-05-04 | 2.8 | 3.00 | — | 3.0 | 0.008 | 1.15 | 1.0 | 0.08 | 9.03 | 0.01 | 2.131 | 6.96 | 0.00 | 3.5 | 96.5 | 0.0 | -2.32 | 0.62 | 0.88 | 5.44 | 3.0 | 0.003 | 0.57 | 0.0 | 0.05 | 14.54 | 0.01 | 2.233 | 4.42 | 0.96 | 2.7 | 97.3 | 0.0 | -0.27 | 1.18 | 0.64 | 0.90 | 3.37 | 3899 | 483 | 1 | 0 | 1 | 124 | 0 | logfile |
✔ | 3J9E | 6240 | 2023-11-13 | 2015-01-10 | 3.3 | 2.66 | — | 3.3 | 0.032 | 3.28 | 0.0 | 0.09 | 21.31 | 0.02 | 1.223 | 20.81 | 24.26 | 9.8 | 87.3 | 2.9 | -3.41 | 0.77 | 0.88 | 3.26 | 3.3 | 0.004 | 0.78 | 0.0 | 0.04 | 17.71 | 0.00 | 2.103 | 10.58 | 0.46 | 7.9 | 91.5 | 0.6 | 0.80 | 1.24 | 0.72 | 0.85 | 3.33 | 4098 | 520 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 3J9D | 6239 | 2023-11-13 | 2015-01-09 | 3.3 | 2.70 | — | 3.4 | 0.027 | 2.04 | 0.0 | 0.08 | 20.57 | 0.01 | 2.034 | 23.66 | 24.92 | 8.2 | 89.6 | 2.2 | -3.64 | 0.81 | 0.89 | 2.90 | 3.3 | 0.022 | 0.83 | 0.0 | 0.04 | 17.52 | 0.00 | 2.197 | 15.77 | 0.60 | 7.4 | 91.9 | 0.7 | -1.61 | 2.37 | 0.75 | 0.84 | 2.85 | 6086 | 746 | 1 | 0 | 1 | 0 | 0 | logfile |
✔ | 8F6T | 28890 | 2023-11-13 | 2022-11-17 | 2.76 | 3.61 | 2.91 | 3.4 | 0.004 | 0.63 | 0.0 | 0.04 | 12.87 | 0.00 | 2.119 | 4.79 | 0.00 | 5.4 | 94.6 | 0.0 | 0.80 | 0.65 | 0.86 | 3.26 | 3.4 | 0.003 | 0.56 | 0.0 | 0.04 | 14.75 | 0.00 | 2.183 | 5.23 | 0.28 | 5.0 | 95.0 | 0.0 | 0.62 | 0.36 | 0.62 | 0.84 | 2.54 | 3473 | 428 | 1 | 0 | 4 | 0 | 0 | logfile |
✔ | 8P34 | 17383 | 2023-11-13 | 2023-05-17 | 2.61 | 2.80 | 2.24 | 2.8 | 0.009 | 1.32 | 0.0 | 0.08 | 11.05 | 0.01 | 2.651 | 0.69 | 0.00 | 5.4 | 94.6 | 0.0 | -1.84 | 0.29 | 0.90 | 7.34 | 2.8 | 0.002 | 0.50 | 0.0 | 0.05 | 13.21 | 0.00 | 2.693 | 0.69 | 0.00 | 4.3 | 95.7 | 0.0 | -1.63 | 0.36 | 0.28 | 0.88 | 6.21 | 711 | 94 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 7ZZ4 | 15034 | 2023-11-13 | 2022-05-25 | 2.63 | 3.04 | 2.56 | 2.2 | 0.008 | 1.05 | 0.0 | 0.05 | 17.04 | 0.00 | 2.035 | 5.21 | 0.27 | 3.3 | 96.7 | 0.0 | -0.79 | 0.86 | 0.84 | 4.14 | 2.2 | 0.003 | 0.54 | 0.0 | 0.04 | 17.07 | 0.00 | 1.948 | 10.15 | 1.59 | 3.7 | 96.3 | 0.0 | 0.70 | 0.28 | 0.87 | 0.85 | 3.99 | 3682 | 463 | 1 | 0 | 3 | 11 | 0 | logfile |
✔ | 5YW7 | 6847 | 2023-11-14 | 2017-11-29 | 4.4 | 4.45 | 4.13 | 4.3 | 0.004 | 0.71 | 1.0 | 0.05 | 13.01 | 0.01 | 2.246 | 14.02 | 6.49 | 4.3 | 95.7 | 0.0 | -2.58 | 0.70 | 0.79 | — | 4.3 | 0.003 | 0.71 | 0.0 | 0.04 | 13.10 | 0.00 | 2.227 | 12.04 | 0.00 | 3.8 | 96.2 | 0.0 | 0.76 | 1.83 | 0.71 | 0.80 | — | 8944 | 1140 | 1 | 0 | 2 | 0 | 0 | logfile |
✔ | 6V6C | 21068 | 2023-11-13 | 2019-12-04 | 4.5 | 4.50 | — | 4.4 | 0.003 | 0.55 | 0.0 | 0.04 | 13.78 | 0.00 | 2.226 | 7.10 | 0.00 | 5.1 | 94.9 | 0.0 | -4.56 | 0.42 | 0.82 | — | 4.4 | 0.003 | 0.67 | 0.0 | 0.04 | 14.26 | 0.00 | 2.222 | 6.48 | 0.23 | 4.7 | 95.3 | 0.0 | -0.11 | 2.03 | 0.42 | 0.81 | — | 4007 | 497 | 1 | 0 | 0 | 0 | 0 | logfile |