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Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 8UPT | 42455 | 2024-03-10 | 2023-10-23 | 2.8 | 3.38 | 2.84 | 2.9 | 0.016 | 2.20 | 0.0 | 0.16 | 30.45 | 0.01 | 1.072 | 99.56 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.23 | 0.59 | — | 2.9 | 0.005 | 0.73 | 0.0 | 0.04 | 27.91 | 0.01 | 2.113 | 22.27 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.95 | 0.28 | 0.87 | — | 1518 | 0 | 1 | 71 | 0 | 0 | 0 | logfile |
✔ | 8DMF | 27535 | 2024-03-10 | 2022-07-08 | 4.0 | 4.71 | 3.73 | 4.1 | 0.003 | 0.64 | 0.0 | 0.05 | 14.28 | 0.00 | 1.977 | 13.96 | 0.00 | 5.0 | 95.0 | 0.0 | -0.20 | 0.81 | 0.83 | — | 4.1 | 0.005 | 0.73 | 0.0 | 0.04 | 16.01 | 0.00 | 1.812 | 21.12 | 1.14 | 7.4 | 92.6 | 0.0 | -0.69 | 0.44 | 0.82 | 0.84 | — | 5670 | 718 | 1 | 0 | 2 | 0 | 0 | logfile |
✔ | 6PZC | 20534 | 2024-03-11 | 2019-07-31 | 4.34 | 4.63 | — | 4.4 | 0.008 | 1.12 | 0.0 | 0.06 | 11.22 | 0.01 | 2.137 | 7.52 | 0.42 | 9.7 | 90.3 | 0.0 | -5.15 | 0.60 | 0.54 | — | 4.4 | 0.004 | 0.75 | 0.0 | 0.04 | 11.33 | 0.00 | 2.087 | 13.46 | 0.00 | 6.9 | 93.0 | 0.1 | -0.07 | 1.65 | 0.70 | 0.78 | — | 7456 | 1173 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 7SRQ | 25401 | 2024-03-10 | 2021-11-08 | 2.7 | 2.17 | — | 1.9 | 0.008 | 0.80 | 0.0 | 0.05 | 14.14 | 0.01 | 2.296 | 8.67 | 1.50 | 2.8 | 97.2 | 0.0 | 0.29 | 0.70 | 0.72 | 4.55 | 1.9 | 0.003 | 0.67 | 0.0 | 0.04 | 15.38 | 0.00 | 2.275 | 6.89 | 2.50 | 2.4 | 97.6 | 0.0 | 0.36 | 0.47 | 0.72 | 0.77 | 3.67 | 1960 | 254 | 1 | 0 | 2 | 0 | 0 | logfile |
✔ | 6T6V | 10387 | 2024-03-10 | 2019-10-19 | 4.5 | 4.58 | — | 4.5 | 0.009 | 1.34 | 1.0 | 0.08 | 15.46 | 0.01 | 1.944 | 15.31 | 0.00 | 6.4 | 93.6 | 0.0 | -4.09 | 0.63 | 0.78 | — | 4.5 | 0.005 | 0.81 | 0.0 | 0.04 | 14.28 | 0.00 | 2.097 | 18.08 | 0.00 | 5.3 | 94.7 | 0.0 | 0.09 | 1.25 | 0.63 | 0.79 | — | 5868 | 742 | 1 | 0 | 3 | 0 | 0 | logfile |
✔ | 7EEi | 31077 | 2024-03-14 | 2021-03-18 | 3.6 | 3.44 | — | 3.4 | 0.006 | 1.09 | 0.0 | 0.06 | 13.71 | 0.01 | 1.975 | 5.03 | 0.00 | 0.1 | 99.9 | 0.0 | -1.90 | 0.77 | 0.77 | 1.99 | 3.4 | 0.003 | 0.63 | 0.0 | 0.04 | 15.24 | 0.00 | 2.178 | 8.49 | 3.27 | 4.9 | 95.1 | 0.0 | 0.28 | 1.24 | 0.80 | 0.79 | 2.09 | 9825 | 1400 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 7SYF | 25524 | 2024-03-15 | 2021-11-24 | 4.2 | 3.03 | 3.92 | 2.2 | 0.013 | 1.86 | 8.0 | 0.10 | 14.32 | 0.01 | 2.460 | 1.62 | 1.31 | 3.9 | 96.1 | 0.0 | -1.56 | 0.67 | 0.61 | — | 2.2 | 0.003 | 0.71 | 0.0 | 0.04 | 14.17 | 0.00 | 2.133 | 15.23 | 0.08 | 3.6 | 96.4 | 0.0 | 1.06 | 1.12 | 0.68 | 0.64 | — | 11108 | 1391 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 6SL1 | 10234 | 2024-03-18 | 2019-08-16 | 3.6 | 3.62 | — | 3.5 | 0.011 | 0.83 | 0.0 | 0.05 | 14.94 | 0.01 | 2.016 | 13.54 | 6.72 | 8.4 | 91.4 | 0.2 | -4.42 | 0.72 | 0.80 | 2.39 | 3.5 | 0.003 | 0.63 | 0.0 | 0.04 | 16.45 | 0.00 | 2.094 | 7.98 | 3.49 | 4.0 | 96.0 | 0.0 | 0.14 | 0.79 | 0.72 | 0.80 | 1.87 | 21041 | 2652 | 1 | 0 | 2 | 0 | 0 | logfile |
✔ | 6XoW | 22282 | 2024-03-11 | 2020-07-07 | 4.6 | 8.17 | 4.40 | 7.0 | 0.006 | 1.00 | 0.0 | 0.05 | 13.39 | 0.01 | 1.991 | 24.14 | 0.23 | 4.2 | 95.8 | 0.0 | -0.98 | 0.87 | 0.72 | — | 6.9 | 0.004 | 0.76 | 0.0 | 0.04 | 13.49 | 0.01 | 2.102 | 27.34 | 0.23 | 4.6 | 95.4 | 0.0 | 0.07 | 1.90 | 0.92 | 0.82 | — | 7711 | 966 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 6i26 | 0328 | 2024-03-19 | 2018-10-31 | 4.3 | 4.37 | — | 4.2 | 0.005 | 0.89 | 0.0 | 0.05 | 8.22 | 0.01 | 0.411 | 6.12 | 0.50 | 6.4 | 93.3 | 0.3 | -6.25 | 0.75 | 0.60 | — | 4.2 | 0.004 | 0.72 | 0.0 | 0.04 | 10.44 | 0.00 | 2.206 | 7.12 | 0.00 | 7.5 | 92.4 | 0.1 | -0.07 | 0.98 | 0.84 | 0.77 | — | 22765 | 3366 | 1 | 0 | 221 | 0 | 0 | logfile |
✔ | 7R9E | 24324 | 2024-03-11 | 2021-06-29 | 4.0 | 4.83 | — | 3.9 | 0.002 | 0.37 | 0.0 | 0.04 | 4.45 | 0.00 | 2.277 | 3.11 | 0.00 | 9.9 | 88.7 | 1.4 | -3.58 | 0.87 | 0.80 | — | 3.9 | 0.003 | 0.59 | 0.0 | 0.04 | 9.14 | 0.00 | 2.120 | 9.84 | 0.98 | 5.4 | 94.6 | 0.0 | -0.26 | 2.08 | 0.88 | 0.82 | — | 7726 | 505 | 1 | 0 | 0 | 0 | 3938 | logfile |
✔ | 5LiJ | 4054 | 2024-03-10 | 2016-07-14 | 4.2 | 3.63 | — | 4.2 | 0.009 | 2.92 | 4.0 | 0.17 | 15.82 | 0.01 | 2.249 | 25.64 | 0.00 | 10.7 | 89.3 | 0.0 | -6.36 | 0.85 | 0.76 | — | 3.8 | 0.005 | 1.17 | 0.0 | 0.04 | 10.44 | 0.00 | 2.149 | 15.78 | 0.00 | 35.3 | 64.7 | 0.0 | -5.53 | 1.48 | 0.86 | 0.78 | — | 761 | 152 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 7LQ6 | 23482 | 2024-03-10 | 2021-02-13 | 3.28 | 4.07 | 3.16 | 3.5 | 0.005 | 0.76 | 0.0 | 0.05 | 15.77 | 0.00 | 1.549 | 9.45 | 1.41 | 5.5 | 94.4 | 0.2 | -4.83 | 0.90 | 0.85 | 3.36 | 3.5 | 0.002 | 0.59 | 0.0 | 0.04 | 16.29 | 0.00 | 2.146 | 7.09 | 0.88 | 3.9 | 96.1 | 0.0 | 0.16 | 1.02 | 0.91 | 0.87 | 1.86 | 5267 | 672 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 6WYJ | 21966 | 2024-03-10 | 2020-05-13 | 3.7 | 3.74 | — | 3.8 | 0.010 | 0.64 | 0.0 | 0.05 | 12.33 | 0.00 | 2.268 | 5.08 | 0.00 | 5.3 | 94.7 | 0.0 | -4.80 | 0.59 | 0.78 | 4.37 | 3.8 | 0.003 | 0.62 | 0.0 | 0.04 | 14.60 | 0.00 | 2.249 | 5.08 | 2.56 | 1.5 | 98.5 | 0.0 | 1.79 | 0.58 | 0.64 | 0.81 | 1.65 | 2949 | 398 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 7MPE | 23932 | 2024-03-15 | 2021-05-04 | 3.2 | 3.91 | — | 3.8 | 0.005 | 0.69 | 0.0 | 0.04 | 14.10 | 0.00 | 2.174 | 14.62 | 0.00 | 6.9 | 93.1 | 0.0 | -2.52 | 0.62 | 0.77 | 2.09 | 3.8 | 0.004 | 0.90 | 1.0 | 0.06 | 16.08 | 0.01 | 1.458 | 13.99 | 2.96 | 5.9 | 94.1 | 0.0 | -0.77 | 0.37 | 0.64 | 0.79 | 1.29 | 11214 | 1428 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 7W7U | 32348 | 2024-03-11 | 2021-12-06 | 3.0 | 2.54 | 2.92 | 2.9 | 0.003 | 0.56 | 0.0 | 0.04 | 12.54 | 0.00 | 1.966 | 7.56 | 0.00 | 2.6 | 97.4 | 0.0 | 0.77 | 0.59 | 0.77 | 1.85 | 3.0 | 0.002 | 0.50 | 0.0 | 0.04 | 16.16 | 0.00 | 2.070 | 7.94 | 1.39 | 2.8 | 97.2 | 0.0 | 0.60 | 1.30 | 0.59 | 0.79 | 1.47 | 7833 | 1015 | 1 | 0 | 2 | 0 | 0 | logfile |
✔ | 7K8D | 22728 | 2024-03-15 | 2020-09-26 | 4.33 | 4.48 | — | 4.7 | 0.004 | 1.12 | 0.0 | 0.06 | 12.53 | 0.01 | 2.205 | 23.61 | 1.86 | 4.3 | 95.7 | 0.0 | -2.98 | 0.33 | 0.40 | — | 4.6 | 0.004 | 0.85 | 0.0 | 0.04 | 13.28 | 0.01 | 2.153 | 17.55 | 0.00 | 5.4 | 94.6 | 0.0 | 0.21 | 1.47 | 0.43 | 0.49 | — | 5529 | 725 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 6LN5 | 0924 | 2024-03-11 | 2019-12-28 | 2.8 | 2.93 | 2.78 | 2.9 | 0.005 | 0.63 | 0.0 | 0.04 | 12.83 | 0.00 | 2.027 | 5.32 | 0.12 | 2.0 | 98.0 | 0.0 | -4.16 | 0.68 | 0.83 | 3.56 | 2.9 | 0.003 | 0.56 | 0.0 | 0.04 | 16.16 | 0.00 | 2.156 | 6.34 | 1.74 | 2.0 | 98.0 | 0.0 | 0.67 | 1.32 | 0.68 | 0.85 | 2.98 | 7840 | 1011 | 1 | 0 | 4 | 0 | 0 | logfile |
✔ | 8C03 | 16354 | 2024-03-10 | 2022-12-15 | 3.89 | 4.09 | 3.71 | 4.1 | 0.007 | 0.86 | 0.0 | 0.04 | 12.87 | 0.00 | 1.232 | 8.74 | 3.06 | 2.8 | 97.2 | 0.0 | 2.75 | 0.56 | 0.76 | 1.69 | 4.1 | 0.003 | 0.67 | 0.0 | 0.04 | 16.22 | 0.00 | 2.173 | 14.66 | 3.06 | 1.9 | 98.1 | 0.0 | 2.48 | 1.49 | 0.56 | 0.78 | 1.07 | 3330 | 429 | 1 | 0 | 1 | 0 | 0 | logfile |
✔ | 8DEP | 27394 | 2024-03-10 | 2022-06-21 | 3.6 | 4.01 | 3.65 | 3.8 | 0.008 | 0.76 | 0.0 | 0.07 | 19.70 | 0.01 | 2.197 | 5.44 | 0.65 | 0.5 | 99.5 | 0.0 | 3.03 | 0.47 | 0.78 | 1.93 | 3.9 | 0.003 | 0.63 | 0.0 | 0.03 | 13.06 | 0.00 | 2.178 | 8.00 | 1.29 | 2.0 | 98.0 | 0.0 | 2.52 | 0.66 | 0.46 | 0.78 | 1.76 | 3223 | 398 | 1 | 0 | 4 | 0 | 0 | logfile |