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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✘ | 6LQA | 0942 | 2023-04-21 | 2020-01-13 | 3.3 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 9387 | 1151 | 1 | 0 | 10 | 0 | 0 | logfile |
✔ | 6X2Z | 22014 | 2023-04-19 | 2020-05-21 | 3.03 | 3.18 | — | 3.2 | 0.005 | 0.84 | 0.0 | 0.05 | 15.51 | 0.01 | 2.131 | 6.52 | 0.00 | 3.6 | 96.4 | 0.0 | -5.65 | 0.44 | 0.86 | 2.63 | 3.2 | 0.003 | 0.67 | 0.0 | 0.04 | 16.15 | 0.00 | 2.195 | 9.40 | 0.28 | 2.9 | 97.1 | 0.0 | 0.74 | 0.96 | 0.44 | 0.87 | 2.26 | 3205 | 420 | 1 | 0 | 3 | 0 | 0 | logfile |
✔ | 7TX7 | 26156 | 2023-04-19 | 2022-02-07 | 3.8 | 4.02 | 3.76 | 3.9 | 0.008 | 0.76 | 0.0 | 0.07 | 12.94 | 0.00 | 2.072 | 6.28 | 0.00 | 1.8 | 98.2 | 0.0 | 3.77 | 0.44 | 0.74 | 1.59 | 3.9 | 0.003 | 0.77 | 0.0 | 0.04 | 16.58 | 0.00 | 2.219 | 9.34 | 0.33 | 2.5 | 97.5 | 0.0 | 2.15 | 1.32 | 0.46 | 0.75 | 1.83 | 3203 | 397 | 1 | 0 | 4 | 0 | 0 | logfile |
✔ | 7VLT | 32026 | 2023-04-21 | 2021-10-05 | 3.1 | 3.37 | 3.11 | 3.4 | 0.004 | 0.60 | 0.0 | 0.04 | 12.71 | 0.00 | 1.963 | 3.24 | 2.19 | 1.9 | 98.1 | 0.0 | 0.12 | 0.67 | 0.83 | 2.64 | 3.4 | 0.003 | 0.55 | 0.0 | 0.04 | 15.16 | 0.00 | 2.010 | 8.03 | 0.00 | 1.3 | 98.7 | 0.0 | 2.53 | 1.87 | 0.66 | 0.83 | 2.02 | 9024 | 1145 | 1 | 0 | 6 | 0 | 0 | logfile |
✔ | 7JGE | 22324 | 2023-04-25 | 2020-07-19 | 4.0 | 4.23 | — | 4.2 | 0.002 | 0.44 | 0.0 | 0.05 | 13.35 | 0.00 | 2.115 | 14.01 | 0.00 | 3.7 | 96.3 | 0.0 | 1.11 | 0.54 | 0.54 | — | 4.2 | 0.003 | 0.55 | 0.0 | 0.06 | 15.53 | 0.00 | 2.042 | 17.29 | 0.08 | 7.3 | 92.7 | 0.0 | 0.23 | 0.64 | 0.60 | 0.65 | — | 20315 | 1437 | 1 | 0 | 0 | 0 | 8508 | logfile |
✔ | 7DTC | 30850 | 2023-04-21 | 2021-01-04 | 3.3 | 3.73 | — | 3.6 | 0.004 | 0.70 | 0.0 | 0.04 | 14.15 | 0.00 | 2.201 | 12.28 | 0.49 | 7.9 | 91.6 | 0.4 | -3.34 | 0.52 | 0.80 | 1.81 | 3.5 | 0.003 | 0.77 | 0.0 | 0.04 | 15.99 | 0.00 | 2.219 | 11.11 | 0.59 | 8.1 | 91.8 | 0.1 | 0.24 | 1.35 | 0.54 | 0.82 | 1.38 | 9363 | 1151 | 1 | 0 | 9 | 0 | 0 | logfile |
✔ | 6XMT | 22263 | 2023-04-20 | 2020-06-30 | 3.3 | 3.96 | 3.42 | 3.7 | 0.004 | 0.61 | 0.0 | 0.04 | 12.44 | 0.00 | 1.814 | 7.30 | 0.00 | 4.5 | 95.5 | 0.0 | -2.38 | 0.72 | 0.82 | 2.61 | 3.8 | 0.002 | 0.54 | 0.0 | 0.04 | 14.21 | 0.00 | 2.054 | 5.85 | 0.11 | 3.4 | 96.6 | 0.0 | 0.58 | 0.42 | 0.72 | 0.85 | 1.95 | 8324 | 1092 | 1 | 0 | 2 | 0 | 0 | logfile |
✔ | 7PTQ | 13633 | 2023-04-24 | 2021-09-27 | 4.08 | 6.47 | 4.22 | 4.0 | 0.005 | 0.78 | 0.0 | 0.04 | 15.27 | 0.00 | 1.983 | 0.92 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.91 | 0.80 | — | 4.0 | 0.006 | 0.67 | 0.0 | 0.04 | 19.44 | 0.00 | 1.852 | 43.48 | 0.00 | 0.0 | 0.0 | 0.0 | — | 2.75 | 0.96 | 0.94 | — | 17434 | 0 | 1 | 544 | 0 | 0 | 5847 | logfile |
✔ | 7XSN | 33428 | 2023-04-20 | 2022-05-14 | 3.01 | 4.02 | 3.04 | 3.2 | 0.013 | 1.06 | 0.0 | 0.05 | 16.67 | 0.01 | 2.252 | 5.79 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.91 | 0.84 | — | 3.2 | 0.006 | 0.61 | 0.0 | 0.03 | 16.36 | 0.00 | 2.111 | 20.82 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.30 | 0.92 | 0.87 | — | 8279 | 0 | 1 | 387 | 0 | 0 | 0 | logfile |
✔ | 5M5H | 4155 | 2023-04-19 | 2016-10-21 | 4.5 | 2.29 | — | 2.2 | 0.007 | 1.50 | 0.0 | 0.08 | 12.37 | 0.01 | 2.186 | 39.89 | 0.00 | 8.7 | 88.9 | 2.4 | -5.94 | 0.14 | 0.14 | — | 2.1 | 0.004 | 0.89 | 0.0 | 0.05 | 12.67 | 0.01 | 2.275 | 23.84 | 0.00 | 8.7 | 91.3 | 0.0 | -1.45 | 2.20 | 0.15 | 0.14 | — | 1086 | 132 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 6XMQ | 22261 | 2023-04-20 | 2020-06-30 | 3.7 | 4.26 | 3.79 | 4.0 | 0.006 | 0.66 | 0.0 | 0.04 | 12.80 | 0.00 | 1.660 | 6.11 | 0.00 | 3.7 | 96.3 | 0.0 | -1.63 | 0.72 | 0.85 | 1.50 | 4.0 | 0.004 | 0.60 | 0.0 | 0.04 | 14.86 | 0.00 | 1.920 | 7.07 | 0.22 | 3.9 | 96.1 | 0.0 | 0.66 | 1.28 | 0.72 | 0.86 | 1.32 | 8362 | 1085 | 1 | 0 | 2 | 0 | 0 | logfile |
✔ | 7W02 | 32234 | 2023-04-22 | 2021-11-17 | 3.3 | 3.44 | — | 3.4 | 0.007 | 0.89 | 0.0 | 0.05 | 14.65 | 0.00 | 1.892 | 7.36 | 0.23 | 10.9 | 89.1 | 0.1 | -3.18 | 0.68 | 0.87 | 2.65 | 3.4 | 0.003 | 0.64 | 0.0 | 0.04 | 15.86 | 0.00 | 1.978 | 5.78 | 0.16 | 7.5 | 92.4 | 0.1 | -1.36 | 0.32 | 0.68 | 0.88 | 2.02 | 12326 | 1566 | 1 | 0 | 6 | 0 | 0 | logfile |
✔ | 7XSL | 33426 | 2023-04-22 | 2022-05-14 | 3.84 | 4.65 | 3.83 | 3.7 | 0.002 | 0.47 | 0.0 | 0.02 | 16.20 | 0.00 | 1.935 | 8.02 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.91 | 0.77 | — | 3.8 | 0.006 | 0.70 | 0.0 | 0.04 | 18.31 | 0.01 | 1.810 | 33.53 | 0.00 | 0.0 | 0.0 | 0.0 | — | 1.02 | 0.92 | 0.83 | — | 12467 | 0 | 1 | 388 | 0 | 0 | 4168 | logfile |
✔ | 7XSM | 33427 | 2023-04-22 | 2022-05-14 | 4.01 | 4.70 | 4.03 | 4.0 | 0.002 | 0.47 | 0.0 | 0.03 | 15.76 | 0.00 | 1.969 | 7.06 | 0.00 | 0.0 | 0.0 | 0.0 | — | 0.90 | 0.75 | — | 4.0 | 0.007 | 0.76 | 0.0 | 0.04 | 19.93 | 0.01 | 1.773 | 49.65 | 0.00 | 0.0 | 0.0 | 0.0 | — | 1.70 | 0.92 | 0.82 | — | 12464 | 0 | 1 | 388 | 0 | 0 | 4165 | logfile |
✔ | 6XMP | 22260 | 2023-04-21 | 2020-06-30 | 3.5 | 4.29 | 3.63 | 4.0 | 0.007 | 0.78 | 0.0 | 0.04 | 13.27 | 0.00 | 2.192 | 6.56 | 0.00 | 2.9 | 97.1 | 0.0 | -1.66 | 0.72 | 0.84 | 1.55 | 4.0 | 0.003 | 0.53 | 0.0 | 0.04 | 14.26 | 0.00 | 2.173 | 6.27 | 0.00 | 3.2 | 96.8 | 0.0 | 1.22 | 0.33 | 0.71 | 0.85 | 1.45 | 8545 | 1086 | 1 | 0 | 12 | 0 | 0 | logfile |
✔ | 6ZPG | 11338 | 2023-04-20 | 2020-07-08 | 4.6 | 4.29 | — | 7.0 | 0.004 | 0.99 | 0.0 | 0.05 | 15.64 | 0.01 | 2.313 | 5.51 | 0.25 | 5.6 | 94.4 | 0.0 | -3.85 | 0.60 | 0.55 | — | 7.0 | 0.003 | 0.83 | 0.0 | 0.04 | 15.58 | 0.00 | 2.236 | 19.15 | 0.00 | 6.1 | 93.9 | 0.0 | 0.38 | 1.97 | 0.65 | 0.63 | — | 3808 | 463 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 6XoU | 22280 | 2023-04-20 | 2020-07-07 | 4.0 | 4.67 | 4.02 | 4.1 | 0.005 | 1.06 | 0.0 | 0.06 | 13.63 | 0.01 | 2.261 | 4.13 | 0.23 | 2.8 | 97.2 | 0.0 | -1.51 | 0.89 | 0.75 | — | 4.1 | 0.003 | 0.85 | 0.0 | 0.04 | 14.98 | 0.00 | 2.141 | 12.38 | 0.70 | 2.9 | 97.1 | 0.0 | 1.17 | 1.78 | 0.91 | 0.85 | — | 7697 | 965 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 7RYQ | 24745 | 2023-04-20 | 2021-08-25 | 4.6 | 6.00 | 4.65 | 4.8 | 0.005 | 1.08 | 0.0 | 0.06 | 15.48 | 0.01 | 1.251 | 39.25 | 6.25 | 10.7 | 88.9 | 0.4 | -1.51 | 0.85 | 0.76 | — | 4.8 | 0.003 | 0.76 | 0.0 | 0.04 | 14.17 | 0.01 | 2.162 | 16.62 | 0.00 | 7.6 | 92.4 | 0.0 | -0.37 | 1.23 | 0.85 | 0.77 | — | 4332 | 527 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 7JGG | 22326 | 2023-04-20 | 2020-07-19 | 4.88 | 8.00 | — | 7.7 | 0.002 | 0.46 | 0.0 | 0.03 | 13.22 | 0.00 | 1.988 | 54.49 | 0.00 | 3.3 | 96.5 | 0.2 | 1.67 | 0.66 | 0.64 | — | 7.5 | 0.002 | 0.47 | 0.0 | 0.03 | 12.80 | 0.00 | 1.958 | 77.81 | 0.00 | 4.3 | 95.7 | 0.0 | 1.53 | 1.24 | 0.66 | 0.69 | — | 4210 | 506 | 1 | 0 | 0 | 0 | 28 | logfile |
✔ | 7UV0 | 26808 | 2023-04-20 | 2022-04-29 | 3.1 | 3.20 | 3.07 | 3.2 | 0.005 | 0.61 | 0.0 | 0.04 | 13.07 | 0.00 | 2.160 | 5.85 | 0.51 | 7.7 | 92.3 | 0.0 | 0.23 | 0.59 | 0.79 | 2.75 | 3.3 | 0.003 | 0.60 | 0.0 | 0.04 | 14.96 | 0.00 | 2.312 | 7.67 | 0.25 | 5.9 | 94.1 | 0.0 | 1.16 | 1.14 | 0.54 | 0.77 | 1.59 | 3784 | 501 | 1 | 0 | 4 | 0 | 0 | logfile |