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Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 5X5C | 6706 | 2023-08-19 | 2017-02-15 | 4.1 | 4.20 | — | 4.1 | 0.014 | 1.75 | 3.0 | 0.08 | 14.64 | 0.01 | 1.435 | 30.55 | 5.82 | 13.2 | 85.6 | 1.2 | -3.80 | 0.65 | 0.57 | — | 4.1 | 0.004 | 0.96 | 0.0 | 0.05 | 13.03 | 0.01 | 2.034 | 19.12 | 0.07 | 12.9 | 86.9 | 0.2 | -2.46 | 1.55 | 0.72 | 0.71 | — | 26418 | 3423 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 6DBR | 7848 | 2023-08-14 | 2018-05-03 | 4.0 | 4.12 | — | 4.0 | 0.005 | 1.05 | 3.0 | 0.05 | 21.17 | 0.01 | 1.376 | 19.29 | 0.25 | 7.9 | 92.0 | 0.1 | -4.14 | 0.80 | 0.82 | — | 4.0 | 0.005 | 0.76 | 0.0 | 0.04 | 21.62 | 0.00 | 2.094 | 19.63 | 0.51 | 6.9 | 93.0 | 0.1 | -1.42 | 1.50 | 0.80 | 0.83 | — | 17040 | 1794 | 10 | 136 | 6 | 0 | 0 | logfile |
✔ | 7N28 | 24128 | 2023-08-20 | 2021-05-28 | 4.2 | 4.38 | 4.07 | 4.2 | 0.005 | 0.74 | 1.0 | 0.06 | 14.29 | 0.00 | 2.103 | 12.05 | 0.16 | 7.9 | 92.1 | 0.0 | -1.88 | 0.85 | 0.79 | — | 4.2 | 0.003 | 0.63 | 0.0 | 0.05 | 14.22 | 0.00 | 2.051 | 11.69 | 0.06 | 6.8 | 93.2 | 0.0 | -1.52 | 0.37 | 0.85 | 0.79 | — | 29461 | 3523 | 58 | 0 | 140 | 0 | 0 | logfile |
✔ | 7ARB | 11878 | 2023-08-11 | 2020-10-23 | 3.41 | 3.20 | — | 3.2 | 0.004 | 0.65 | 2.0 | 0.07 | 13.95 | 0.00 | 1.982 | 8.37 | 0.02 | 3.8 | 96.1 | 0.1 | 0.49 | 0.78 | 0.85 | 3.13 | 3.2 | 0.002 | 0.52 | 0.0 | 0.04 | 15.88 | 0.00 | 2.029 | 7.92 | 0.09 | 3.3 | 96.7 | 0.0 | 0.94 | 1.91 | 0.81 | 0.88 | 2.71 | 61765 | 7716 | 66 | 0 | 55 | 0 | 0 | logfile |
✔ | 6AB5 | 6999 | 2023-08-24 | 2018-07-20 | 3.7 | 3.79 | — | 3.7 | 0.007 | 0.96 | 6.0 | 0.06 | 11.27 | 0.01 | 1.686 | 24.89 | 0.75 | 5.6 | 94.4 | 0.0 | -3.80 | 0.85 | 0.86 | 3.48 | 3.7 | 0.007 | 0.66 | 0.0 | 0.05 | 14.07 | 0.00 | 2.100 | 12.10 | 0.29 | 7.2 | 92.8 | 0.0 | -2.04 | 0.62 | 0.87 | 0.87 | 2.34 | 139740 | 18180 | 60 | 0 | 0 | 0 | 0 | logfile |
✔ | 7Q9F | 13868 | 2023-08-22 | 2021-11-12 | 3.6 | 3.95 | — | 3.7 | 0.004 | 0.51 | 0.0 | 0.04 | 9.26 | 0.00 | 1.941 | 4.46 | 0.45 | 3.9 | 96.1 | 0.0 | 0.15 | 0.88 | 0.86 | 2.34 | 3.7 | 0.003 | 0.58 | 0.0 | 0.04 | 12.62 | 0.00 | 2.113 | 10.88 | 0.11 | 4.6 | 95.4 | 0.0 | 0.10 | 1.03 | 0.88 | 0.86 | 1.98 | 34264 | 4312 | 29 | 0 | 64 | 0 | 0 | logfile |
✔ | 7Y24 | 33585 | 2023-08-10 | 2022-06-09 | 3.25 | 3.61 | 3.34 | 3.6 | 0.004 | 0.68 | 2.0 | 0.06 | 12.92 | 0.00 | 2.208 | 12.97 | 0.37 | 3.0 | 97.0 | 0.0 | 0.69 | 0.61 | 0.73 | 1.83 | 3.5 | 0.003 | 0.63 | 0.0 | 0.04 | 15.21 | 0.00 | 2.227 | 12.72 | 0.25 | 3.1 | 96.9 | 0.0 | 0.78 | 1.19 | 0.62 | 0.76 | 1.47 | 8229 | 1127 | 6 | 0 | 2 | 0 | 0 | logfile |
✔ | 7E2C | 30954 | 2023-08-17 | 2021-02-05 | 4.18 | 4.23 | — | 4.1 | 0.008 | 1.50 | 3.0 | 0.08 | 15.12 | 0.01 | 1.675 | 10.10 | 0.94 | 15.3 | 83.6 | 1.1 | -5.41 | 0.78 | 0.68 | — | 4.1 | 0.003 | 0.77 | 1.0 | 0.05 | 14.06 | 0.00 | 2.118 | 12.98 | 0.00 | 13.0 | 86.7 | 0.2 | -3.20 | 0.71 | 0.76 | 0.68 | — | 23020 | 3295 | 11 | 0 | 0 | 0 | 0 | logfile |
✔ | 7WF4 | 32460 | 2023-08-17 | 2021-12-25 | 3.4 | 2.86 | — | 2.8 | 0.009 | 1.05 | 8.0 | 0.07 | 13.55 | 0.01 | 2.085 | 6.38 | 6.01 | 3.8 | 95.7 | 0.4 | -1.41 | 0.61 | 0.73 | 3.58 | 2.8 | 0.005 | 0.63 | 0.0 | 0.04 | 14.81 | 0.00 | 2.090 | 4.97 | 0.47 | 3.2 | 96.4 | 0.4 | 0.69 | 1.41 | 0.71 | 0.85 | 3.65 | 22143 | 2760 | 25 | 0 | 7 | 100 | 0 | logfile |
✔ | 8BGU | 16036 | 2023-08-09 | 2022-10-28 | 4.1 | 5.77 | 3.97 | 4.0 | 0.003 | 0.84 | 0.0 | 0.04 | 16.17 | 0.00 | 2.235 | 4.09 | 0.00 | 5.0 | 95.0 | 0.0 | -2.58 | 0.92 | 0.86 | — | 4.0 | 0.003 | 0.57 | 0.0 | 0.03 | 16.68 | 0.00 | 2.102 | 20.05 | 0.00 | 8.8 | 91.2 | 0.0 | -0.51 | 2.19 | 0.92 | 0.87 | — | 4779 | 447 | 5 | 121 | 1 | 0 | 0 | logfile |
✔ | 7Xo1 | 33333 | 2023-08-09 | 2022-04-30 | 3.0 | 2.71 | 1.85 | 3.1 | 0.002 | 0.53 | 0.0 | 0.05 | 16.42 | 0.00 | 2.269 | 6.86 | 0.00 | 5.0 | 95.0 | 0.0 | -2.46 | 0.45 | 0.86 | 4.75 | 3.1 | 0.003 | 0.59 | 0.0 | 0.05 | 17.68 | 0.00 | 2.230 | 2.29 | 2.33 | 6.4 | 93.6 | 0.0 | -2.11 | 1.59 | 0.43 | 0.86 | 5.91 | 2550 | 372 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 8AA0 | 15289 | 2023-08-22 | 2022-06-29 | 3.2 | 3.48 | 3.08 | 3.3 | 0.010 | 0.62 | 0.0 | 0.05 | 10.93 | 0.00 | 1.978 | 8.02 | 0.00 | 4.4 | 95.4 | 0.2 | 0.31 | 0.85 | 0.88 | 3.66 | 3.3 | 0.004 | 0.54 | 0.0 | 0.04 | 12.58 | 0.00 | 2.001 | 7.80 | 0.09 | 4.2 | 95.7 | 0.1 | -0.03 | 0.37 | 0.85 | 0.90 | 3.63 | 33058 | 4134 | 16 | 0 | 26 | 0 | 0 | logfile |
✔ | 7F0T | 31404 | 2023-08-12 | 2021-06-07 | 3.1 | 3.75 | — | 3.7 | 0.010 | 1.02 | 2.0 | 0.06 | 14.29 | 0.01 | 2.065 | 13.17 | 0.57 | 5.2 | 94.8 | 0.0 | -2.51 | 0.58 | 0.74 | 2.44 | 3.8 | 0.003 | 0.59 | 0.0 | 0.04 | 16.18 | 0.00 | 2.214 | 9.05 | 0.45 | 3.0 | 97.0 | 0.0 | 0.72 | 0.58 | 0.56 | 0.72 | 1.59 | 8164 | 1033 | 6 | 0 | 1 | 0 | 0 | logfile |
✔ | 5FN2 | 3237 | 2023-08-11 | 2015-11-10 | 4.2 | 4.23 | — | 4.2 | 0.009 | 1.73 | 23.0 | 0.10 | 17.98 | 0.01 | 1.890 | 19.04 | 11.69 | 11.9 | 84.1 | 3.9 | -1.77 | 0.48 | 0.55 | — | 4.2 | 0.005 | 0.92 | 0.0 | 0.05 | 14.42 | 0.01 | 2.145 | 22.58 | 0.00 | 9.5 | 89.6 | 0.8 | -1.02 | 1.11 | 0.59 | 0.73 | — | 10276 | 1309 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 8AoW | 15554 | 2023-08-25 | 2022-08-08 | 2.7 | 2.68 | 2.76 | 2.8 | 0.014 | 0.94 | 1.0 | 0.05 | 16.87 | 0.01 | 1.869 | 7.27 | 1.60 | 2.2 | 97.8 | 0.0 | -0.28 | 0.74 | 0.85 | 3.41 | 2.7 | 0.003 | 0.57 | 0.0 | 0.04 | 16.76 | 0.00 | 1.932 | 6.11 | 1.45 | 1.6 | 98.4 | 0.0 | 0.01 | 0.47 | 0.77 | 0.90 | 4.37 | 43632 | 5424 | 36 | 0 | 48 | 324 | 0 | logfile |
✔ | 8ooA | 17008 | 2023-08-10 | 2023-04-04 | 3.18 | 1.83 | 3.09 | 2.8 | 0.008 | 1.08 | 0.0 | 0.06 | 28.16 | 0.01 | 2.299 | 5.05 | 0.00 | 1.5 | 98.5 | 0.0 | -2.10 | 0.75 | 0.76 | 3.22 | 2.8 | 0.005 | 0.62 | 0.0 | 0.04 | 28.81 | 0.00 | 2.125 | 7.71 | 0.00 | 2.3 | 97.7 | 0.0 | 1.67 | 1.03 | 0.77 | 0.77 | 2.62 | 8405 | 529 | 8 | 204 | 0 | 0 | 0 | logfile |
✔ | 8BPF | 16151 | 2023-08-15 | 2022-11-16 | 3.5 | 4.03 | 3.35 | 3.4 | 0.006 | 0.85 | 0.0 | 0.06 | 13.56 | 0.01 | 2.267 | 6.33 | 0.00 | 9.5 | 90.5 | 0.0 | -1.72 | 0.86 | 0.77 | 2.18 | 3.5 | 0.003 | 0.70 | 0.0 | 0.05 | 15.37 | 0.00 | 2.174 | 11.69 | 0.38 | 7.8 | 92.0 | 0.1 | -1.10 | 1.75 | 0.89 | 0.80 | 1.83 | 18593 | 2370 | 23 | 0 | 12 | 0 | 0 | logfile |
✔ | 6X8T | 22095 | 2023-08-19 | 2020-06-01 | 2.9 | 2.95 | 2.71 | 2.9 | 0.007 | 0.68 | 0.0 | 0.05 | 12.90 | 0.01 | 1.483 | 6.41 | 0.41 | 5.4 | 94.6 | 0.0 | -0.76 | 0.86 | 0.88 | 4.43 | 2.9 | 0.002 | 0.50 | 0.0 | 0.04 | 15.63 | 0.00 | 2.225 | 4.94 | 0.70 | 5.0 | 95.0 | 0.0 | 0.24 | 3.98 | 0.86 | 0.89 | 4.12 | 133440 | 16800 | 60 | 0 | 0 | 0 | 0 | logfile |
✔ | 7X2F | 32966 | 2023-08-12 | 2022-02-25 | 3.0 | 3.70 | — | 3.6 | 0.006 | 0.83 | 2.0 | 0.05 | 12.82 | 0.01 | 2.164 | 13.36 | 0.11 | 3.2 | 96.8 | 0.0 | -0.87 | 0.58 | 0.73 | 2.55 | 3.6 | 0.002 | 0.55 | 0.0 | 0.04 | 15.89 | 0.00 | 2.155 | 8.36 | 1.25 | 2.0 | 98.0 | 0.0 | 0.74 | 0.46 | 0.52 | 0.68 | 2.00 | 8249 | 1036 | 6 | 0 | 4 | 0 | 0 | logfile |
✘ | 7E0J | 30934 | 2023-08-10 | 2021-01-28 | 3.13 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 8140 | 672 | 6 | 0 | 56 | 0 | 0 | logfile |