The table shows a selection of parameters. Activate more columns using
the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 6V9Q | 21126 | 2023-04-28 | 2019-12-15 | 2.9 | 3.05 | — | 3.0 | 0.008 | 1.12 | 1.0 | 0.07 | 12.82 | 0.01 | 2.040 | 9.79 | 1.56 | 6.5 | 93.4 | 0.1 | -4.27 | 0.76 | 0.83 | 3.71 | 3.0 | 0.006 | 0.75 | 0.0 | 0.05 | 16.98 | 0.01 | 2.101 | 8.90 | 3.38 | 6.2 | 93.8 | 0.0 | -0.56 | 1.72 | 0.75 | 0.86 | 3.27 | 28090 | 3337 | 13 | 61 | 4 | 0 | 0 | logfile |
✘ | 6PM5 | 20388 | 2023-04-23 | 2019-07-01 | 3.1 | 3.38 | — | 3.4 | 0.002 | 0.49 | 0.0 | 0.06 | 6.82 | 0.00 | 2.275 | 4.99 | 0.00 | 2.4 | 97.6 | 0.0 | -4.42 | 0.52 | 0.78 | 3.48 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 13975 | 1735 | 15 | 0 | 15 | 0 | 0 | logfile |
✔ | 6VBW | 21146 | 2023-04-28 | 2019-12-19 | 3.2 | 3.31 | — | 3.3 | 0.011 | 1.19 | 2.0 | 0.07 | 14.36 | 0.01 | 2.057 | 12.06 | 1.96 | 8.5 | 91.4 | 0.1 | -4.69 | 0.75 | 0.79 | 3.46 | 3.3 | 0.003 | 0.63 | 0.0 | 0.04 | 16.75 | 0.00 | 2.133 | 9.76 | 0.37 | 6.4 | 93.5 | 0.0 | -1.58 | 1.31 | 0.79 | 0.85 | 2.45 | 29087 | 3343 | 15 | 107 | 4 | 0 | 0 | logfile |
✔ | 6PPK | 20441 | 2023-04-29 | 2019-07-07 | 4.4 | 4.58 | — | 4.5 | 0.008 | 1.08 | 15.0 | 0.05 | 20.24 | 0.01 | 1.150 | 22.61 | 8.03 | 11.8 | 87.5 | 0.7 | -4.28 | 0.88 | 0.83 | — | 4.4 | 0.005 | 0.75 | 0.0 | 0.04 | 19.38 | 0.01 | 2.041 | 27.33 | 0.04 | 10.8 | 89.2 | 0.0 | -2.34 | 1.59 | 0.88 | 0.84 | — | 80451 | 2684 | 24 | 2770 | 1 | 0 | 0 | logfile |
✔ | 7MR1 | 23953 | 2023-04-24 | 2021-05-07 | 4.2 | 4.74 | — | 4.6 | 0.003 | 0.78 | 0.0 | 0.05 | 14.91 | 0.01 | 2.237 | 5.74 | 0.00 | 5.5 | 94.5 | 0.0 | -1.78 | 0.85 | 0.84 | — | 4.6 | 0.004 | 0.68 | 0.0 | 0.04 | 14.81 | 0.00 | 2.159 | 12.63 | 0.00 | 7.5 | 92.4 | 0.0 | -0.59 | 0.33 | 0.85 | 0.84 | — | 18473 | 2316 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 7MR4 | 23956 | 2023-04-24 | 2021-05-07 | 4.5 | 4.68 | — | 4.5 | 0.004 | 0.86 | 0.0 | 0.05 | 16.97 | 0.01 | 2.014 | 7.21 | 0.00 | 5.4 | 94.6 | 0.0 | -1.71 | 0.82 | 0.81 | — | 4.5 | 0.002 | 0.60 | 0.0 | 0.04 | 16.74 | 0.00 | 2.039 | 13.47 | 0.06 | 5.2 | 94.8 | 0.0 | -0.11 | 0.50 | 0.82 | 0.82 | — | 17203 | 2057 | 5 | 33 | 0 | 0 | 0 | logfile |
✔ | 7JW0 | 22512 | 2023-04-27 | 2020-08-24 | 4.3 | 4.63 | 4.41 | 4.4 | 0.010 | 1.54 | 6.0 | 0.10 | 8.01 | 0.01 | 2.527 | 0.37 | 0.00 | 2.3 | 97.5 | 0.1 | 1.05 | 0.81 | 0.71 | — | 4.4 | 0.003 | 0.64 | 0.0 | 0.05 | 9.97 | 0.00 | 2.180 | 5.50 | 0.00 | 3.4 | 96.6 | 0.0 | 0.41 | 1.28 | 0.85 | 0.79 | — | 26251 | 4314 | 27 | 0 | 69 | 0 | 0 | logfile |
✔ | 7S1M | 24805 | 2023-04-21 | 2021-09-02 | 2.41 | 2.95 | 2.09 | 2.8 | 0.003 | 0.51 | 0.0 | 0.04 | 13.54 | 0.00 | 2.233 | 4.89 | 0.10 | 1.9 | 98.1 | 0.0 | 1.84 | 0.81 | 0.87 | 3.93 | 2.8 | 0.003 | 0.54 | 0.0 | 0.04 | 15.96 | 0.00 | 2.152 | 5.62 | 1.36 | 1.8 | 98.2 | 0.0 | 1.68 | 0.92 | 0.77 | 0.87 | 3.72 | 9160 | 1168 | 6 | 0 | 1 | 0 | 0 | logfile |
✘ | 7S8B | 24892 | 2023-04-25 | 2021-09-17 | 2.43 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 21124 | 2448 | 8 | 0 | 46 | 0 | 0 | logfile |
✔ | 7EJ2 | 31149 | 2023-04-25 | 2021-04-01 | 3.3 | 3.53 | — | 3.4 | 0.009 | 0.94 | 0.0 | 0.06 | 15.52 | 0.01 | 2.290 | 7.49 | 0.19 | 4.8 | 95.1 | 0.1 | -5.99 | 0.81 | 0.85 | 3.23 | 3.4 | 0.003 | 0.67 | 0.0 | 0.04 | 15.70 | 0.00 | 2.192 | 8.75 | 0.24 | 2.2 | 97.8 | 0.0 | -1.52 | 0.57 | 0.84 | 0.87 | 2.77 | 20968 | 2728 | 12 | 0 | 4 | 0 | 0 | logfile |
✔ | 6V8X | 21111 | 2023-04-27 | 2019-12-12 | 3.0 | 3.33 | — | 3.2 | 0.017 | 1.48 | 9.0 | 0.08 | 9.76 | 0.01 | 2.180 | 4.31 | 0.23 | 8.5 | 90.6 | 0.9 | -3.90 | 0.82 | 0.77 | 2.66 | 3.2 | 0.004 | 0.85 | 0.0 | 0.05 | 14.98 | 0.00 | 2.151 | 12.63 | 3.42 | 7.7 | 92.0 | 0.3 | -1.96 | 1.44 | 0.84 | 0.81 | 2.32 | 24825 | 2997 | 54 | 0 | 105 | 0 | 0 | logfile |
✘ | 5GW4 | 9540 | 2023-04-22 | 2016-09-08 | 4.7 | 4.89 | — | 4.8 | 0.001 | 0.42 | 0.0 | 0.04 | 7.26 | 0.00 | 2.187 | 6.49 | 0.00 | 4.3 | 95.6 | 0.1 | -3.58 | 0.77 | 0.66 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 64544 | 8446 | 16 | 0 | 0 | 0 | 0 | logfile |
✔ | 6D7S | 7824 | 2023-04-24 | 2018-04-25 | 4.34 | 4.44 | — | 4.3 | 0.007 | 1.16 | 0.0 | 0.06 | 11.86 | 0.01 | 2.248 | 7.14 | 1.17 | 12.1 | 87.8 | 0.2 | -5.61 | 0.77 | 0.79 | — | 4.3 | 0.003 | 0.84 | 0.0 | 0.04 | 13.76 | 0.00 | 2.227 | 15.13 | 0.15 | 10.2 | 89.8 | 0.0 | -1.25 | 1.42 | 0.77 | 0.80 | — | 19018 | 2372 | 4 | 0 | 0 | 0 | 0 | logfile |
✘ | 6PPL | 20442 | 2023-04-20 | 2019-07-08 | 3.02 | 3.14 | — | 3.1 | 0.010 | 0.99 | 0.0 | 0.25 | 14.17 | 0.01 | 1.917 | 3.20 | 0.23 | 2.7 | 97.3 | 0.0 | -6.00 | 0.74 | 0.86 | 4.10 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 8155 | 980 | 6 | 0 | 4 | 0 | 0 | logfile |
✔ | 6KS7 | 0759 | 2023-04-22 | 2019-08-23 | 4.62 | 4.57 | — | 4.5 | 0.001 | 0.39 | 0.0 | 0.04 | 7.11 | 0.00 | 2.241 | 5.72 | 0.00 | 4.3 | 95.7 | 0.0 | -3.50 | 0.70 | 0.62 | — | 4.5 | 0.003 | 0.70 | 0.0 | 0.04 | 12.04 | 0.00 | 2.131 | 14.80 | 0.03 | 3.3 | 96.6 | 0.1 | -0.06 | 1.85 | 0.74 | 0.67 | — | 62022 | 8131 | 16 | 0 | 0 | 0 | 0 | logfile |
✔ | 6PZA | 20530 | 2023-04-21 | 2019-07-31 | 3.74 | 3.92 | — | 3.9 | 0.008 | 1.06 | 0.0 | 0.06 | 10.72 | 0.01 | 2.252 | 3.22 | 0.00 | 8.0 | 92.0 | 0.0 | -4.29 | 0.51 | 0.50 | 0.87 | 3.8 | 0.003 | 0.68 | 0.0 | 0.04 | 14.90 | 0.00 | 2.228 | 9.43 | 0.58 | 5.0 | 95.0 | 0.0 | 0.79 | 1.25 | 0.62 | 0.79 | 0.90 | 9659 | 1441 | 3 | 0 | 2 | 0 | 0 | logfile |
✔ | 8EXQ | 28659 | 2023-04-21 | 2022-10-25 | 4.9 | 5.40 | 5.55 | 6.0 | 0.020 | 1.74 | 0.0 | 0.10 | 10.28 | 0.01 | 2.002 | 1.81 | 0.00 | 2.5 | 97.3 | 0.2 | 0.34 | 0.52 | 0.45 | — | 6.0 | 0.003 | 0.74 | 0.0 | 0.04 | 12.89 | 0.00 | 2.068 | 17.98 | 0.00 | 5.3 | 94.5 | 0.2 | -0.50 | 2.54 | 0.58 | 0.63 | — | 9304 | 1108 | 4 | 0 | 2 | 0 | 0 | logfile |
✔ | 7XDD | 33144 | 2023-04-21 | 2022-03-26 | 2.93 | 2.56 | 2.92 | 3.0 | 0.005 | 0.72 | 0.0 | 0.05 | 14.36 | 0.00 | 2.204 | 6.52 | 2.03 | 2.4 | 97.6 | 0.0 | 0.32 | 0.79 | 0.85 | 3.21 | 3.0 | 0.003 | 0.60 | 0.0 | 0.04 | 16.22 | 0.00 | 2.100 | 7.14 | 1.93 | 2.1 | 97.9 | 0.0 | 1.85 | 0.47 | 0.80 | 0.87 | 2.70 | 9021 | 1123 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 6J2X | 9772 | 2023-04-19 | 2019-01-03 | 3.8 | 3.99 | — | 3.9 | 0.002 | 0.40 | 0.0 | 0.04 | 7.12 | 0.00 | 2.220 | 6.65 | 0.00 | 5.8 | 94.1 | 0.1 | -3.52 | 0.80 | 0.70 | 0.49 | 3.9 | 0.004 | 0.78 | 1.0 | 0.04 | 15.31 | 0.00 | 2.050 | 18.52 | 0.40 | 4.7 | 95.2 | 0.1 | -0.69 | 1.88 | 0.84 | 0.78 | 0.88 | 106176 | 13501 | 47 | 0 | 0 | 0 | 0 | logfile |
✔ | 6UVA | 20906 | 2023-04-21 | 2019-11-01 | 2.3 | 2.12 | 2.31 | 2.2 | 0.002 | 0.55 | 0.0 | 0.04 | 18.04 | 0.00 | 2.207 | 6.66 | 3.36 | 3.2 | 96.8 | 0.0 | -2.29 | 0.63 | 0.72 | 2.83 | 2.3 | 0.003 | 0.63 | 0.0 | 0.04 | 18.40 | 0.00 | 2.148 | 9.03 | 3.26 | 4.6 | 95.4 | 0.0 | 0.18 | 1.31 | 0.66 | 0.79 | 2.96 | 9561 | 1199 | 7 | 0 | 0 | 0 | 0 | logfile |