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Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7DDE | 30652 | 2024-03-25 | 2020-10-28 | 2.26 | 3.31 | — | 3.0 | 0.009 | 1.14 | 10.0 | 0.07 | 14.34 | 0.01 | 2.042 | 8.48 | 1.16 | 5.0 | 94.9 | 0.0 | -2.84 | 0.71 | 0.85 | 3.66 | 3.0 | 0.003 | 0.63 | 0.0 | 0.04 | 15.93 | 0.00 | 1.978 | 13.04 | 1.07 | 6.0 | 94.0 | 0.0 | -0.26 | 1.17 | 0.69 | 0.85 | 3.21 | 51171 | 6300 | 36 | 0 | 48 | 1911 | 0 | logfile |
✔ | 7P1G | 13158 | 2024-03-20 | 2021-07-01 | 3.2 | 3.39 | — | 3.3 | 0.022 | 1.36 | 10.0 | 0.08 | 15.09 | 0.01 | 1.310 | 9.08 | 0.17 | 6.0 | 94.0 | 0.0 | -2.89 | 0.65 | 0.80 | 3.22 | 3.3 | 0.003 | 0.69 | 0.0 | 0.04 | 16.22 | 0.00 | 1.976 | 10.71 | 1.61 | 2.9 | 97.1 | 0.0 | -0.01 | 1.76 | 0.65 | 0.83 | 2.23 | 28580 | 3620 | 25 | 5 | 25 | 0 | 0 | logfile |
✔ | 6N2Z | 9334 | 2024-03-23 | 2018-11-14 | 3.0 | 3.31 | 3.03 | 3.3 | 0.008 | 1.08 | 0.0 | 0.06 | 10.70 | 0.01 | 0.890 | 9.58 | 0.51 | 3.7 | 96.3 | 0.1 | -2.41 | 0.64 | 0.76 | 3.99 | 3.2 | 0.003 | 0.67 | 0.0 | 0.04 | 14.89 | 0.00 | 1.997 | 11.09 | 2.43 | 3.5 | 96.5 | 0.0 | 0.91 | 1.19 | 0.66 | 0.83 | 2.92 | 35051 | 4692 | 27 | 0 | 26 | 0 | 0 | logfile |
✔ | 6EXV | 3981 | 2024-03-22 | 2017-11-09 | 3.6 | 3.52 | 3.44 | 3.5 | 0.008 | 1.10 | 0.0 | 0.06 | 13.26 | 0.01 | 2.022 | 5.60 | 0.29 | 8.9 | 91.1 | 0.1 | -4.63 | 0.68 | 0.74 | 3.30 | 3.5 | 0.004 | 0.65 | 0.0 | 0.05 | 16.46 | 0.00 | 2.019 | 7.44 | 2.71 | 6.4 | 93.6 | 0.0 | -1.49 | 1.19 | 0.74 | 0.80 | 1.84 | 32717 | 3905 | 22 | 75 | 9 | 0 | 0 | logfile |
✔ | 6NP0 | 0469 | 2024-03-17 | 2019-01-17 | 2.92 | 3.16 | 3.01 | 3.1 | 0.011 | 1.29 | 0.0 | 0.08 | 13.91 | 0.01 | 2.270 | 3.63 | 0.55 | 5.2 | 94.8 | 0.0 | -3.90 | 0.69 | 0.72 | 2.76 | 3.1 | 0.004 | 0.68 | 0.0 | 0.05 | 13.93 | 0.00 | 2.198 | 5.70 | 3.23 | 3.1 | 96.9 | 0.0 | 0.30 | 0.81 | 0.79 | 0.85 | 2.88 | 16891 | 1975 | 20 | 0 | 41 | 0 | 0 | logfile |
✔ | 6BWD | 7297 | 2024-03-19 | 2017-12-14 | 3.7 | 3.83 | — | 3.8 | 0.011 | 1.68 | 8.0 | 0.09 | 13.88 | 0.01 | 1.254 | 13.17 | 0.57 | 12.5 | 86.3 | 1.2 | -5.69 | 0.64 | 0.76 | 1.55 | 3.8 | 0.005 | 1.18 | 2.0 | 0.05 | 15.65 | 0.01 | 1.904 | 18.40 | 5.09 | 10.0 | 89.1 | 0.9 | -1.70 | 2.49 | 0.65 | 0.78 | 1.70 | 23187 | 2600 | 12 | 0 | 509 | 30 | 0 | logfile |
✔ | 7D44 | 30569 | 2024-03-20 | 2020-09-22 | 4.0 | 4.14 | — | 4.0 | 0.006 | 0.86 | 0.0 | 0.05 | 14.78 | 0.00 | 2.049 | 20.50 | 0.28 | 16.3 | 83.6 | 0.1 | -5.25 | 0.80 | 0.78 | — | 4.1 | 0.004 | 0.78 | 1.0 | 0.04 | 16.13 | 0.00 | 1.996 | 14.94 | 2.63 | 6.7 | 93.3 | 0.0 | -1.76 | 0.61 | 0.80 | 0.76 | — | 28391 | 3825 | 12 | 0 | 0 | 0 | 0 | logfile |
✔ | 4V1A | 2787 | 2024-03-22 | 2014-09-25 | 3.4 | 3.43 | — | 3.4 | 0.009 | 1.29 | 0.0 | 0.05 | 13.81 | 0.01 | 2.067 | 12.17 | 6.03 | 4.6 | 95.3 | 0.1 | -2.62 | 0.37 | 0.78 | 1.69 | 3.4 | 0.003 | 0.69 | 0.0 | 0.04 | 16.98 | 0.00 | 2.070 | 10.97 | 3.71 | 4.0 | 95.9 | 0.1 | 0.59 | 1.85 | 0.38 | 0.80 | 1.65 | 31917 | 3843 | 24 | 0 | 94 | 0 | 0 | logfile |
✔ | 4V19 | 2787 | 2024-03-15 | 2014-09-25 | 3.4 | 3.44 | — | 3.4 | 0.009 | 1.32 | 0.0 | 0.05 | 23.56 | 0.01 | 1.860 | 9.75 | 6.97 | 3.8 | 96.1 | 0.1 | -2.85 | 0.76 | 0.88 | 2.04 | 3.4 | 0.004 | 0.72 | 1.0 | 0.04 | 22.66 | 0.01 | 1.093 | 9.21 | 4.48 | 3.8 | 96.1 | 0.1 | -0.27 | 1.50 | 0.76 | 0.88 | 2.14 | 69409 | 4361 | 42 | 1583 | 171 | 204 | 0 | logfile |
✘ | 6o9K | 0662 | 2024-03-23 | 2019-03-14 | 4.0 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | -2.96 | — | — | — | 4.0 | 0.007 | 0.92 | 2.0 | 0.04 | 24.18 | 0.01 | 1.729 | 49.48 | 5.60 | 12.2 | 87.1 | 0.7 | -2.94 | — | 0.92 | 0.86 | — | 146597 | 6162 | 55 | 4594 | 0 | 0 | 0 | logfile |
✔ | 6i1X | 0326 | 2024-03-11 | 2018-10-30 | 3.7 | 3.83 | — | 3.8 | 0.013 | 1.81 | 34.0 | 0.10 | 14.94 | 0.01 | 0.458 | 50.06 | 4.35 | 7.5 | 90.6 | 1.9 | -3.51 | 0.50 | 0.32 | 0.28 | 3.8 | 0.003 | 0.77 | 0.0 | 0.05 | 16.50 | 0.00 | 2.113 | 17.73 | 2.99 | 3.9 | 95.9 | 0.3 | -1.11 | 1.03 | 0.65 | 0.61 | 0.90 | 54915 | 7290 | 15 | 0 | 0 | 0 | 0 | logfile |
✘ | 6ioL | 9696 | 2024-03-25 | 2018-10-30 | 3.76 | 3.62 | 3.77 | 3.8 | 0.005 | 0.97 | 0.0 | 0.06 | 10.77 | 0.01 | 2.201 | 5.12 | 0.33 | 5.6 | 94.4 | 0.0 | -4.06 | 0.63 | 0.80 | 2.11 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 49077 | 6450 | 12 | 0 | 0 | 0 | 0 | logfile |
✔ | 6KS8 | 0760 | 2024-03-12 | 2019-08-23 | 4.69 | 4.76 | — | 4.6 | 0.001 | 0.39 | 0.0 | 0.04 | 7.12 | 0.00 | 2.228 | 5.86 | 0.01 | 4.4 | 95.5 | 0.0 | -3.61 | 0.77 | 0.67 | — | 4.6 | 0.003 | 0.69 | 0.0 | 0.04 | 11.58 | 0.00 | 2.091 | 17.25 | 0.01 | 3.7 | 96.3 | 0.0 | -0.05 | 1.87 | 0.81 | 0.72 | — | 61943 | 8120 | 16 | 0 | 0 | 0 | 0 | logfile |
✔ | 7S8C | 24893 | 2024-03-18 | 2021-09-17 | 2.85 | 2.35 | — | 2.5 | 0.010 | 1.19 | 0.0 | 0.06 | 14.48 | 0.01 | 2.221 | 6.51 | 0.75 | 3.0 | 97.0 | 0.0 | -4.72 | 0.76 | 0.82 | 4.13 | 2.5 | 0.003 | 0.65 | 0.0 | 0.04 | 16.99 | 0.00 | 2.210 | 10.68 | 3.25 | 2.4 | 97.6 | 0.0 | 1.09 | 0.63 | 0.77 | 0.83 | 2.52 | 20562 | 2448 | 8 | 0 | 34 | 0 | 0 | logfile |
✔ | 6PLX | 20379 | 2024-03-16 | 2019-07-01 | 2.9 | 3.61 | — | 3.5 | 0.011 | 1.13 | 0.0 | 0.06 | 13.13 | 0.01 | 2.316 | 6.04 | 0.00 | 3.2 | 96.8 | 0.0 | -5.10 | 0.56 | 0.83 | 4.25 | 3.5 | 0.003 | 0.66 | 0.0 | 0.04 | 14.59 | 0.00 | 2.154 | 9.58 | 2.90 | 3.0 | 97.0 | 0.0 | -1.19 | 1.33 | 0.47 | 0.74 | 3.42 | 14240 | 1730 | 15 | 0 | 20 | 0 | 0 | logfile |
✔ | 7RUA | 24701 | 2024-03-15 | 2021-08-16 | 3.4 | 3.27 | 3.30 | 3.3 | 0.003 | 0.57 | 0.0 | 0.04 | 14.91 | 0.01 | 1.920 | 7.52 | 0.00 | 2.2 | 97.8 | 0.0 | 1.77 | 0.65 | 0.76 | 2.85 | 3.3 | 0.004 | 0.57 | 0.0 | 0.04 | 16.88 | 0.01 | 2.085 | 9.64 | 3.21 | 2.2 | 97.8 | 0.0 | 1.57 | 1.28 | 0.75 | 0.85 | 2.78 | 11603 | 1448 | 10 | 0 | 5 | 0 | 0 | logfile |
✔ | 8DBD | 27280 | 2024-03-20 | 2022-06-14 | 3.2 | 3.20 | 3.28 | 3.2 | 0.007 | 0.77 | 0.0 | 0.06 | 15.09 | 0.00 | 2.119 | 5.93 | 2.74 | 3.3 | 96.7 | 0.0 | 0.45 | 0.65 | 0.77 | 3.28 | 3.2 | 0.003 | 0.52 | 0.0 | 0.05 | 16.30 | 0.00 | 2.089 | 7.64 | 2.61 | 4.0 | 96.0 | 0.0 | 0.94 | 1.29 | 0.66 | 0.85 | 3.07 | 28464 | 3708 | 24 | 0 | 24 | 0 | 0 | logfile |
✔ | 7EoS | 31229 | 2024-03-19 | 2021-04-22 | 3.9 | 4.43 | — | 3.9 | 0.002 | 0.42 | 0.0 | 0.04 | 9.75 | 0.00 | 2.254 | 6.49 | 1.89 | 4.1 | 95.8 | 0.1 | 0.47 | 0.88 | 0.78 | 1.32 | 4.0 | 0.002 | 0.65 | 0.0 | 0.04 | 12.37 | 0.00 | 2.048 | 12.13 | 1.93 | 5.5 | 94.4 | 0.1 | -0.39 | 1.68 | 0.90 | 0.82 | 1.19 | 24600 | 3106 | 8 | 0 | 18 | 0 | 0 | logfile |
✔ | 7MJP | 23881 | 2024-03-16 | 2021-04-20 | 4.2 | 4.40 | — | 4.3 | 0.008 | 1.11 | 0.0 | 0.07 | 10.54 | 0.01 | 1.477 | 2.76 | 0.00 | 9.1 | 90.9 | 0.0 | -1.16 | 0.51 | 0.65 | — | 4.4 | 0.002 | 0.62 | 0.0 | 0.05 | 8.27 | 0.00 | 2.278 | 0.82 | 0.00 | 8.1 | 91.9 | 0.0 | -0.47 | 0.45 | 0.56 | 0.70 | — | 14163 | 2818 | 10 | 0 | 8 | 0 | 0 | logfile |
✔ | 7WWV | 32874 | 2024-03-19 | 2022-02-14 | 3.2 | 3.31 | — | 3.3 | 0.002 | 0.57 | 0.0 | 0.04 | 16.78 | 0.00 | 2.204 | 6.39 | 0.00 | 8.4 | 91.3 | 0.2 | -0.65 | 0.74 | 0.80 | 2.46 | 3.3 | 0.003 | 0.59 | 0.0 | 0.04 | 18.38 | 0.00 | 2.043 | 7.69 | 2.56 | 9.6 | 90.2 | 0.2 | -0.71 | 1.45 | 0.75 | 0.83 | 2.49 | 19622 | 2233 | 11 | 117 | 0 | 0 | 0 | logfile |