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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7NTA | 12586 | 2022-07-05 | 2021-03-09 | 3.5 | 3.71 | 3.63 | 3.6 | 0.004 | 0.64 | 0.0 | 0.05 | 14.12 | 0.00 | 2.050 | 7.13 | 0.00 | 4.1 | 95.9 | 0.0 | -1.38 | 0.80 | 0.81 | 2.51 | 3.6 | 0.002 | 0.57 | 0.0 | 0.05 | 15.02 | 0.00 | 2.009 | 5.83 | 0.14 | 4.0 | 96.0 | 0.0 | -0.68 | 0.36 | 0.79 | 0.79 | 2.24 | 26805 | 3261 | 34 | 0 | 80 | 89 | 0 | logfile |
✔ | 7KFH | 22853 | 2022-07-04 | 2020-10-13 | 3.8 | 3.87 | — | 3.8 | 0.021 | 1.75 | 0.0 | 0.11 | 10.20 | 0.01 | 2.360 | 0.56 | 0.21 | 1.8 | 97.8 | 0.4 | 1.11 | 0.69 | 0.85 | 3.27 | 3.7 | 0.003 | 0.65 | 0.0 | 0.04 | 13.82 | 0.00 | 2.167 | 8.03 | 0.71 | 2.8 | 97.1 | 0.2 | 0.16 | 1.36 | 0.70 | 0.85 | 2.45 | 13575 | 1695 | 21 | 0 | 30 | 0 | 0 | logfile |
✘ | 7EFC | 31083 | 2022-07-04 | 2021-03-21 | 1.7 | 1.76 | 1.83 | 1.9 | 0.032 | 3.16 | 80.0 | 0.09 | 15.03 | 0.02 | 0.000 | 3.39 | 2.15 | 2.5 | 96.6 | 0.8 | -0.84 | 0.73 | 0.80 | 6.33 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 20020 | 2400 | 20 | 0 | 20 | 780 | 0 | logfile |
✔ | 7KFB | 22848 | 2022-07-03 | 2020-10-13 | 3.9 | 3.46 | — | 3.4 | 0.022 | 1.84 | 3.0 | 0.12 | 9.33 | 0.01 | 2.486 | 1.77 | 0.22 | 1.3 | 98.2 | 0.6 | 0.66 | 0.69 | 0.82 | 3.59 | 3.4 | 0.005 | 0.72 | 0.0 | 0.05 | 14.08 | 0.01 | 2.105 | 11.13 | 0.51 | 3.5 | 96.1 | 0.4 | -0.58 | 1.37 | 0.67 | 0.76 | 2.96 | 13458 | 1665 | 24 | 0 | 42 | 0 | 0 | logfile |
✔ | 7o85 | 12761 | 2022-07-06 | 2021-04-14 | 3.3 | 3.50 | — | 3.5 | 0.002 | 0.48 | 0.0 | 0.04 | 13.51 | 0.00 | 1.470 | 7.44 | 0.00 | 3.3 | 96.7 | 0.0 | -0.25 | 0.71 | 0.75 | 2.90 | 3.5 | 0.004 | 0.61 | 0.0 | 0.04 | 15.42 | 0.01 | 2.106 | 10.96 | 0.32 | 5.0 | 95.0 | 0.0 | -0.97 | 0.55 | 0.74 | 0.81 | 3.18 | 28525 | 3843 | 28 | 0 | 14 | 0 | 0 | logfile |
✘ | 7ALN | 11818 | 2022-07-04 | 2020-10-06 | 3.77 | 3.85 | — | 3.8 | 0.009 | 0.95 | 0.0 | 0.06 | 10.60 | 0.01 | 1.198 | 10.50 | 0.22 | 4.1 | 95.8 | 0.0 | -3.95 | 0.60 | 0.82 | 2.71 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 20789 | 2616 | 11 | 0 | 13 | 0 | 0 | logfile |
✔ | 6Xi8 | 22191 | 2022-07-03 | 2020-06-19 | 3.64 | 2.63 | 3.78 | 2.0 | 0.010 | 1.69 | 4.0 | 0.11 | 15.14 | 0.01 | 1.333 | 6.79 | 0.77 | 9.0 | 91.0 | 0.0 | -4.62 | 0.66 | 0.54 | 0.71 | 1.9 | 0.006 | 0.99 | 0.0 | 0.05 | 17.21 | 0.01 | 2.201 | 19.25 | 0.97 | 9.0 | 91.0 | 0.0 | -2.46 | 1.27 | 0.69 | 0.64 | 0.82 | 5022 | 636 | 4 | 0 | 2 | 0 | 0 | logfile |
✔ | 7KUE | 23036 | 2022-07-03 | 2020-11-24 | 3.5 | 2.53 | 3.43 | 2.0 | 0.010 | 1.62 | 3.0 | 0.11 | 15.40 | 0.01 | 2.205 | 5.94 | 0.78 | 8.4 | 91.6 | 0.0 | -4.55 | 0.71 | 0.69 | 2.12 | 2.1 | 0.009 | 1.32 | 0.0 | 0.05 | 17.12 | 0.01 | 2.220 | 14.64 | 0.97 | 8.2 | 91.8 | 0.0 | -2.42 | 1.32 | 0.72 | 0.71 | 1.56 | 4726 | 577 | 4 | 0 | 2 | 0 | 0 | logfile |
✔ | 7BZW | 30261 | 2022-07-03 | 2020-04-28 | 4.6 | 7.66 | 4.73 | 6.0 | 0.003 | 0.82 | 0.0 | 0.05 | 15.82 | 0.01 | 2.176 | 28.88 | 0.00 | 19.4 | 80.6 | 0.0 | -5.59 | 0.85 | 0.67 | — | 6.5 | 0.003 | 0.87 | 0.0 | 0.06 | 14.64 | 0.01 | 2.267 | 19.17 | 0.00 | 16.2 | 83.8 | 0.0 | -2.75 | 1.57 | 0.93 | 0.86 | — | 9756 | 1212 | 12 | 0 | 0 | 0 | 0 | logfile |
✔ | 7A02 | 11591 | 2022-07-04 | 2020-08-06 | 3.0 | 3.22 | — | 3.2 | 0.008 | 0.74 | 0.0 | 0.05 | 12.61 | 0.00 | 2.323 | 8.00 | 0.00 | 8.2 | 91.8 | 0.0 | -1.94 | 0.60 | 0.85 | 3.93 | 3.2 | 0.005 | 0.68 | 0.0 | 0.05 | 15.22 | 0.00 | 2.114 | 6.47 | 5.80 | 7.0 | 93.0 | 0.0 | -1.24 | 0.95 | 0.59 | 0.88 | 4.20 | 18699 | 2576 | 23 | 0 | 0 | 0 | 0 | logfile |
✔ | 7CBL | 30335 | 2022-07-06 | 2020-06-12 | 2.8 | 3.16 | — | 3.1 | 0.006 | 0.59 | 0.0 | 0.05 | 14.82 | 0.00 | 2.161 | 5.24 | 5.25 | 3.0 | 96.8 | 0.2 | -2.55 | 0.78 | 0.87 | 2.70 | 3.1 | 0.006 | 0.63 | 0.0 | 0.05 | 16.37 | 0.00 | 2.131 | 5.99 | 4.58 | 3.5 | 96.5 | 0.0 | -0.59 | 0.42 | 0.74 | 0.87 | 2.62 | 99242 | 13364 | 78 | 0 | 26 | 0 | 0 | logfile |
✔ | 6ZH5 | 11214 | 2022-07-06 | 2020-06-21 | 2.7 | 3.69 | — | 3.3 | 0.007 | 0.73 | 0.0 | 0.04 | 18.44 | 0.00 | 2.015 | 9.01 | 12.67 | 1.1 | 98.9 | 0.0 | -2.77 | 0.85 | 0.86 | 1.93 | 3.3 | 0.005 | 0.75 | 0.0 | 0.04 | 18.47 | 0.00 | 1.415 | 11.28 | 3.56 | 1.9 | 98.1 | 0.0 | 3.70 | 0.62 | 0.83 | 0.84 | 1.80 | 34408 | 4272 | 35 | 0 | 16 | 0 | 0 | logfile |
✔ | 7CBM | 30336 | 2022-07-05 | 2020-06-12 | 3.2 | 3.68 | — | 3.7 | 0.003 | 0.48 | 0.0 | 0.04 | 9.89 | 0.00 | 2.132 | 7.97 | 2.78 | 4.4 | 95.6 | 0.0 | 0.73 | 0.56 | 0.84 | 2.14 | 3.7 | 0.006 | 0.71 | 2.0 | 0.04 | 14.53 | 0.00 | 1.714 | 14.44 | 0.24 | 5.0 | 95.0 | 0.0 | 0.46 | 0.62 | 0.54 | 0.85 | 1.82 | 87698 | 11818 | 40 | 0 | 0 | 0 | 0 | logfile |
✔ | 7AUE | 11927 | 2022-07-03 | 2020-11-02 | 2.97 | 2.67 | — | 2.8 | 0.006 | 0.79 | 2.0 | 0.05 | 13.82 | 0.01 | 2.077 | 1.90 | 0.11 | 4.2 | 95.8 | 0.0 | -4.47 | 0.62 | 0.84 | 3.98 | 2.8 | 0.004 | 0.65 | 2.0 | 0.05 | 16.61 | 0.00 | 2.215 | 5.01 | 1.38 | 3.4 | 96.6 | 0.0 | -1.28 | 2.17 | 0.62 | 0.86 | 3.47 | 8755 | 1129 | 8 | 0 | 5 | 1 | 0 | logfile |
✔ | 7KF9 | 22847 | 2022-07-03 | 2020-10-13 | 4.4 | 5.43 | — | 4.5 | 0.021 | 1.87 | 0.0 | 0.11 | 10.54 | 0.01 | 2.470 | 1.27 | 0.43 | 2.4 | 97.6 | 0.0 | 0.37 | 0.68 | 0.77 | — | 4.5 | 0.004 | 0.74 | 0.0 | 0.05 | 11.77 | 0.00 | 2.104 | 23.39 | 0.00 | 5.7 | 94.3 | 0.0 | -0.10 | 0.84 | 0.69 | 0.81 | — | 13161 | 1662 | 18 | 0 | 24 | 0 | 0 | logfile |
✔ | 7KEW | 22841 | 2022-07-03 | 2020-10-13 | 4.16 | 4.63 | — | 4.4 | 0.021 | 1.87 | 3.0 | 0.11 | 9.60 | 0.01 | 2.402 | 1.08 | 0.00 | 3.2 | 96.5 | 0.4 | 0.12 | 0.59 | 0.68 | — | 4.4 | 0.004 | 0.82 | 0.0 | 0.05 | 12.77 | 0.01 | 2.102 | 17.23 | 0.00 | 7.6 | 92.4 | 0.0 | -1.15 | 1.65 | 0.61 | 0.74 | — | 13173 | 1650 | 21 | 0 | 24 | 0 | 0 | logfile |
✔ | 7CG7 | 30351 | 2022-07-07 | 2020-06-30 | 3.61 | 3.98 | — | 3.9 | 0.005 | 0.66 | 0.0 | 0.04 | 12.61 | 0.00 | 2.027 | 9.40 | 2.26 | 5.6 | 94.4 | 0.0 | -2.97 | 0.77 | 0.82 | 1.47 | 3.9 | 0.004 | 0.62 | 0.0 | 0.04 | 15.70 | 0.00 | 2.122 | 12.09 | 0.46 | 0.5 | 99.5 | 0.0 | 0.17 | 1.50 | 0.76 | 0.81 | 1.71 | 40290 | 5100 | 34 | 0 | 0 | 0 | 0 | logfile |
✔ | 7KEX | 22842 | 2022-07-03 | 2020-10-13 | 4.25 | 4.92 | — | 4.4 | 0.021 | 1.86 | 0.0 | 0.12 | 11.19 | 0.01 | 2.479 | 1.69 | 0.22 | 3.0 | 96.4 | 0.6 | 0.58 | 0.61 | 0.74 | — | 4.4 | 0.006 | 0.83 | 0.0 | 0.05 | 12.70 | 0.01 | 2.047 | 21.29 | 0.15 | 7.4 | 92.6 | 0.0 | -0.96 | 1.93 | 0.62 | 0.80 | — | 12909 | 1620 | 21 | 0 | 27 | 0 | 0 | logfile |
✔ | 7CGB | 30354 | 2022-07-04 | 2020-07-01 | 3.4 | 4.20 | — | 3.8 | 0.004 | 0.79 | 21.0 | 0.05 | 13.10 | 0.00 | 2.035 | 15.83 | 1.60 | 5.2 | 94.6 | 0.1 | -1.64 | 0.59 | 0.80 | 1.16 | 3.8 | 0.003 | 0.70 | 0.0 | 0.04 | 14.79 | 0.00 | 2.098 | 17.79 | 0.42 | 6.6 | 93.4 | 0.0 | -1.32 | 0.53 | 0.60 | 0.81 | 1.09 | 64834 | 8822 | 22 | 0 | 0 | 0 | 0 | logfile |
✔ | 7CP9 | 30421 | 2022-07-03 | 2020-08-06 | 3.0 | 3.22 | — | 3.2 | 0.007 | 1.24 | 0.0 | 0.04 | 16.75 | 0.00 | 2.183 | 8.69 | 7.05 | 6.5 | 93.5 | 0.0 | -2.50 | 0.57 | 0.74 | 2.84 | 3.2 | 0.003 | 0.76 | 0.0 | 0.04 | 18.07 | 0.00 | 2.113 | 9.32 | 3.35 | 3.7 | 96.3 | 0.0 | 0.54 | 0.67 | 0.58 | 0.76 | 2.03 | 8530 | 1021 | 16 | 0 | 11 | 0 | 0 | logfile |