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Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 6NPY | 0476 | 2023-02-18 | 2019-01-18 | 3.8 | 4.03 | — | 3.8 | 0.006 | 1.16 | 0.0 | 0.06 | 16.44 | 0.01 | 2.244 | 8.58 | 0.84 | 14.6 | 85.3 | 0.1 | -4.90 | 0.79 | 0.71 | 0.51 | 3.8 | 0.003 | 0.91 | 0.0 | 0.05 | 17.24 | 0.00 | 2.196 | 17.30 | 0.60 | 10.2 | 89.8 | 0.0 | -2.29 | 1.10 | 0.78 | 0.70 | 0.72 | 7586 | 965 | 3 | 0 | 1 | 0 | 0 | logfile |
✔ | 6T64 | 10384 | 2023-02-27 | 2019-10-17 | 3.7 | 3.73 | — | 3.7 | 0.006 | 0.87 | 0.0 | 0.05 | 15.20 | 0.01 | 2.307 | 7.58 | 0.53 | 6.0 | 94.0 | 0.0 | -3.28 | 0.50 | 0.76 | 2.25 | 3.7 | 0.003 | 0.66 | 0.0 | 0.04 | 16.37 | 0.00 | 2.226 | 9.64 | 0.24 | 5.6 | 94.4 | 0.0 | 1.35 | 1.40 | 0.51 | 0.78 | 1.69 | 30978 | 3906 | 18 | 0 | 0 | 0 | 0 | logfile |
✔ | 3J5P | 5778 | 2023-02-22 | 2013-10-28 | 3.275 | 3.63 | 3.36 | 3.4 | 0.011 | 1.53 | 0.0 | 0.09 | 21.59 | 0.01 | 1.156 | 79.06 | 27.79 | 5.7 | 94.3 | 0.0 | -0.42 | 0.62 | 0.55 | 0.56 | 3.3 | 0.003 | 0.87 | 0.0 | 0.04 | 17.05 | 0.00 | 2.126 | 17.13 | 0.41 | 5.1 | 94.8 | 0.1 | 0.54 | 2.08 | 0.73 | 0.79 | 0.31 | 18636 | 2324 | 4 | 0 | 44 | 0 | 0 | logfile |
✔ | 7CR4 | 30447 | 2023-02-21 | 2020-08-12 | 3.9 | 4.24 | — | 3.9 | 0.008 | 0.65 | 0.0 | 0.04 | 13.14 | 0.00 | 1.833 | 102.61 | 0.00 | 4.6 | 95.4 | 0.0 | -2.89 | 0.59 | 0.76 | 0.53 | 3.9 | 0.004 | 0.87 | 1.0 | 0.04 | 16.37 | 0.00 | 2.127 | 26.14 | 0.60 | 2.9 | 97.1 | 0.0 | 0.40 | 1.42 | 0.57 | 0.76 | 0.47 | 15988 | 1968 | 12 | 0 | 4 | 0 | 0 | logfile |
✔ | 7CR0 | 30443 | 2023-02-18 | 2020-08-12 | 3.1 | 3.35 | — | 3.4 | 0.005 | 0.63 | 0.0 | 0.04 | 14.38 | 0.00 | 2.212 | 5.87 | 0.00 | 4.0 | 96.0 | 0.0 | -4.99 | 0.58 | 0.82 | 3.75 | 3.4 | 0.003 | 0.59 | 0.0 | 0.03 | 15.47 | 0.00 | 2.219 | 7.51 | 0.12 | 3.4 | 96.6 | 0.0 | 2.81 | 0.56 | 0.57 | 0.81 | 2.63 | 8188 | 1004 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 3J5R | 5777 | 2023-02-22 | 2013-10-28 | 4.2 | 4.88 | — | 7.2 | 0.011 | 1.57 | 0.0 | 0.09 | 20.25 | 0.01 | 1.204 | 84.36 | 28.64 | 7.8 | 91.0 | 1.2 | -0.91 | 0.58 | 0.45 | — | 7.3 | 0.004 | 0.91 | 0.0 | 0.04 | 13.17 | 0.00 | 2.141 | 20.76 | 0.00 | 6.8 | 92.9 | 0.4 | 0.29 | 1.77 | 0.67 | 0.53 | — | 17564 | 2324 | 4 | 0 | 44 | 0 | 0 | logfile |
✔ | 6ZBH | 11155 | 2023-02-23 | 2020-06-08 | 3.6 | 4.44 | 3.80 | 3.9 | 0.010 | 1.17 | 0.0 | 0.08 | 13.65 | 0.01 | 2.465 | 0.97 | 0.00 | 1.0 | 99.0 | 0.0 | 0.82 | 0.86 | 0.76 | 1.40 | 3.9 | 0.002 | 0.49 | 0.0 | 0.03 | 15.13 | 0.00 | 2.128 | 5.53 | 0.18 | 1.1 | 98.9 | 0.0 | 4.23 | 1.08 | 0.88 | 0.81 | 1.30 | 19523 | 1159 | 4 | 0 | 0 | 0 | 9896 | logfile |
✔ | 7TJ6 | 25917 | 2023-02-20 | 2022-01-14 | 2.9 | 3.87 | 2.92 | 3.2 | 0.010 | 2.23 | 0.0 | 0.07 | 18.62 | 0.01 | 2.198 | 11.24 | 2.08 | 4.1 | 95.9 | 0.0 | 0.76 | 0.70 | 0.76 | 1.25 | 3.4 | 0.003 | 0.73 | 0.0 | 0.04 | 16.06 | 0.00 | 2.174 | 10.77 | 0.74 | 3.9 | 96.1 | 0.0 | 1.83 | 1.46 | 0.72 | 0.83 | 1.33 | 13008 | 1564 | 8 | 0 | 28 | 0 | 0 | logfile |
✔ | 7QFP | 13946 | 2023-02-19 | 2021-12-06 | 3.7 | 4.43 | 3.74 | 4.1 | 0.007 | 1.11 | 4.0 | 0.08 | 15.77 | 0.01 | 2.167 | 19.15 | 4.14 | 12.5 | 86.9 | 0.6 | -4.48 | 0.84 | 0.72 | 0.85 | 4.1 | 0.003 | 0.77 | 0.0 | 0.05 | 16.83 | 0.00 | 2.118 | 16.48 | 0.44 | 11.9 | 88.0 | 0.1 | -2.89 | 0.77 | 0.85 | 0.76 | 0.24 | 9996 | 1233 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 6WXR | 21962 | 2023-02-19 | 2020-05-11 | 3.2 | 3.68 | — | 3.6 | 0.010 | 0.94 | 0.0 | 0.04 | 14.39 | 0.01 | 1.518 | 10.46 | 0.19 | 6.6 | 93.3 | 0.1 | -3.63 | 0.71 | 0.80 | 2.51 | 3.6 | 0.003 | 0.66 | 0.0 | 0.04 | 15.61 | 0.00 | 2.167 | 7.28 | 0.19 | 6.5 | 93.4 | 0.1 | -0.93 | 1.17 | 0.70 | 0.82 | 2.25 | 10409 | 1303 | 5 | 0 | 12 | 0 | 0 | logfile |
✔ | 7oR1 | 13037 | 2023-02-23 | 2021-06-04 | 2.64 | 3.23 | — | 3.0 | 0.011 | 1.11 | 0.0 | 0.35 | 13.04 | 0.01 | 2.262 | 2.89 | 1.72 | 6.0 | 93.7 | 0.3 | -2.01 | 0.72 | 0.85 | 3.37 | 3.0 | 0.003 | 0.56 | 0.0 | 0.04 | 14.72 | 0.00 | 2.270 | 3.44 | 1.58 | 4.1 | 95.9 | 0.0 | 1.56 | 1.12 | 0.72 | 0.86 | 2.82 | 19869 | 2384 | 16 | 0 | 33 | 52 | 0 | logfile |
✔ | 7VWJ | 32154 | 2023-02-26 | 2021-11-10 | 2.6 | 2.67 | — | 2.7 | 0.007 | 0.72 | 0.0 | 0.04 | 14.07 | 0.01 | 1.965 | 7.48 | 0.13 | 2.9 | 97.0 | 0.0 | 0.65 | 0.77 | 0.89 | 4.69 | 2.6 | 0.003 | 0.54 | 0.0 | 0.04 | 16.51 | 0.00 | 2.128 | 6.78 | 1.47 | 3.3 | 96.7 | 0.0 | 0.39 | 0.32 | 0.77 | 0.91 | 4.33 | 28748 | 3488 | 44 | 0 | 17 | 711 | 0 | logfile |
✔ | 7oR0 | 13036 | 2023-02-23 | 2021-06-04 | 2.64 | 3.23 | 2.80 | 3.0 | 0.011 | 1.06 | 0.0 | 0.35 | 13.24 | 0.01 | 2.217 | 2.61 | 1.15 | 5.4 | 94.2 | 0.3 | -1.99 | 0.72 | 0.85 | 3.40 | 3.0 | 0.002 | 0.54 | 0.0 | 0.04 | 14.74 | 0.00 | 2.270 | 3.31 | 1.72 | 3.8 | 96.2 | 0.0 | 1.57 | 1.12 | 0.71 | 0.85 | 2.78 | 19869 | 2384 | 16 | 0 | 33 | 52 | 0 | logfile |
✔ | 7XQJ | 33398 | 2023-02-19 | 2022-05-07 | 4.0 | 4.56 | 3.73 | 4.2 | 0.007 | 0.84 | 0.0 | 0.05 | 15.98 | 0.01 | 2.401 | 6.40 | 6.01 | 6.5 | 93.5 | 0.0 | -2.82 | 0.78 | 0.85 | — | 4.3 | 0.004 | 0.84 | 0.0 | 0.04 | 15.98 | 0.00 | 2.320 | 10.96 | 0.46 | 4.8 | 95.2 | 0.0 | 0.90 | 0.78 | 0.78 | 0.85 | — | 9960 | 1224 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 7W3T | 32293 | 2023-02-16 | 2021-11-26 | 3.59 | 2.49 | 3.54 | 2.2 | 0.003 | 0.60 | 0.0 | 0.05 | 13.93 | 0.01 | 2.259 | 8.96 | 0.00 | 4.6 | 95.4 | 0.0 | -2.83 | 0.76 | 0.75 | 4.00 | 2.2 | 0.004 | 0.69 | 0.0 | 0.05 | 15.63 | 0.01 | 2.215 | 13.43 | 0.62 | 6.9 | 93.1 | 0.0 | -3.38 | 0.37 | 0.77 | 0.76 | 3.69 | 1455 | 176 | 3 | 0 | 7 | 0 | 0 | logfile |
✔ | 6R7Y | 4747 | 2023-02-19 | 2019-03-29 | 4.2 | 4.23 | 4.05 | 4.2 | 0.010 | 1.07 | 0.0 | 0.06 | 13.58 | 0.01 | 2.188 | 3.88 | 1.71 | 2.6 | 97.3 | 0.2 | -3.14 | 0.64 | 0.86 | — | 4.2 | 0.004 | 0.64 | 0.0 | 0.04 | 14.13 | 0.00 | 2.200 | 7.07 | 0.00 | 2.8 | 97.0 | 0.2 | 1.52 | 1.09 | 0.65 | 0.85 | — | 10062 | 1254 | 4 | 0 | 6 | 0 | 0 | logfile |
✔ | 7URA | 26707 | 2023-02-17 | 2022-04-21 | 3.11 | 3.40 | 3.12 | 3.3 | 0.020 | 1.12 | 0.0 | 0.78 | 16.47 | 0.00 | 2.051 | 11.83 | 0.00 | 4.2 | 95.8 | 0.0 | -2.18 | 0.59 | 0.85 | 3.83 | 3.3 | 0.002 | 1.08 | 0.0 | 0.12 | 16.33 | 0.00 | 2.219 | 5.44 | 0.36 | 3.4 | 96.6 | 0.0 | 1.10 | 0.41 | 0.57 | 0.85 | 2.59 | 5400 | 658 | 4 | 0 | 6 | 0 | 0 | logfile |
✔ | 7W3X | 32295 | 2023-02-18 | 2021-11-26 | 3.21 | 2.33 | 3.15 | 2.2 | 0.003 | 0.63 | 0.0 | 0.05 | 14.35 | 0.00 | 2.190 | 8.18 | 0.00 | 9.0 | 91.0 | 0.0 | -2.95 | 0.77 | 0.79 | 3.38 | 2.2 | 0.003 | 0.66 | 0.0 | 0.05 | 16.41 | 0.00 | 2.139 | 11.90 | 0.25 | 8.0 | 92.0 | 0.0 | -2.63 | 0.39 | 0.78 | 0.81 | 2.62 | 7429 | 893 | 7 | 0 | 31 | 0 | 0 | logfile |
✔ | 7QKi | 14043 | 2023-02-18 | 2021-12-17 | 3.13 | 3.29 | 3.04 | 3.2 | 0.011 | 1.99 | 3.0 | 0.10 | 9.18 | 0.01 | 2.508 | 0.00 | 0.00 | 10.1 | 89.9 | 0.0 | -1.50 | 0.41 | 0.79 | 6.28 | 3.3 | 0.004 | 0.63 | 0.0 | 0.05 | 11.95 | 0.00 | 2.085 | 5.52 | 0.00 | 5.0 | 95.0 | 0.0 | -1.84 | 0.77 | 0.39 | 0.81 | 5.60 | 7074 | 456 | 6 | 0 | 0 | 0 | 3606 | logfile |
✔ | 5JLF | 8163 | 2023-02-21 | 2016-04-27 | 3.6 | 3.82 | — | 3.7 | 0.013 | 1.58 | 17.0 | 0.11 | 12.26 | 0.01 | 2.184 | 9.01 | 1.29 | 2.9 | 96.6 | 0.6 | -0.70 | 0.64 | 0.74 | 2.52 | 3.7 | 0.003 | 0.72 | 0.0 | 0.04 | 15.21 | 0.00 | 1.982 | 12.28 | 0.52 | 3.4 | 96.3 | 0.3 | 0.12 | 1.43 | 0.68 | 0.83 | 1.85 | 15800 | 1835 | 12 | 0 | 280 | 0 | 0 | logfile |