The table shows a selection of parameters. Activate more columns using
the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7UJN | 26567 | 2023-11-16 | 2022-03-31 | 2.89 | 2.89 | 2.89 | 2.9 | 0.015 | 1.45 | 0.0 | 0.05 | 15.36 | 0.00 | 2.175 | 9.00 | 0.00 | 3.3 | 96.7 | 0.0 | 0.57 | 0.64 | 0.76 | 3.10 | 2.9 | 0.002 | 0.58 | 0.0 | 0.04 | 17.38 | 0.01 | 2.170 | 6.21 | 1.27 | 3.5 | 96.5 | 0.0 | -0.06 | 0.46 | 0.71 | 0.81 | 2.68 | 16272 | 1948 | 8 | 0 | 12 | 0 | 0 | logfile |
✔ | 7KA4 | 22758 | 2023-11-15 | 2020-09-29 | 2.8 | 2.81 | — | 2.8 | 0.005 | 0.89 | 0.0 | 0.05 | 14.06 | 0.01 | 2.372 | 4.23 | 3.96 | 3.2 | 96.8 | 0.0 | -2.20 | 0.77 | 0.82 | 2.71 | 2.9 | 0.003 | 0.57 | 0.0 | 0.04 | 15.66 | 0.00 | 2.180 | 9.64 | 2.61 | 3.7 | 96.3 | 0.0 | 1.62 | 1.41 | 0.78 | 0.84 | 1.41 | 10472 | 1372 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 6CRQ | 7568 | 2023-11-17 | 2018-03-19 | 4.2 | 3.69 | 4.20 | 4.1 | 0.015 | 1.50 | 1.0 | 0.09 | 11.52 | 0.01 | 1.839 | 7.27 | 1.06 | 2.3 | 97.7 | 0.0 | 1.77 | 0.68 | 0.76 | — | 3.6 | 0.005 | 0.87 | 0.0 | 0.05 | 14.00 | 0.00 | 2.122 | 13.16 | 0.00 | 6.5 | 93.4 | 0.0 | -0.58 | 1.43 | 0.68 | 0.78 | — | 20271 | 2391 | 54 | 0 | 105 | 0 | 0 | logfile |
✔ | 7VCT | 31895 | 2023-11-21 | 2021-09-04 | 3.21 | 3.41 | — | 3.4 | 0.007 | 0.94 | 0.0 | 0.05 | 9.64 | 0.01 | 2.132 | 3.51 | 0.00 | 4.4 | 95.6 | 0.0 | -3.08 | 0.77 | 0.82 | 2.62 | 3.3 | 0.004 | 0.61 | 0.0 | 0.04 | 13.35 | 0.00 | 1.973 | 6.65 | 0.08 | 4.4 | 95.6 | 0.0 | 0.51 | 1.31 | 0.77 | 0.85 | 1.90 | 35694 | 4506 | 12 | 0 | 18 | 0 | 0 | logfile |
✔ | 6T72 | 10389 | 2023-11-19 | 2019-10-21 | 3.7 | 3.79 | — | 3.8 | 0.008 | 1.55 | 0.0 | 0.11 | 14.78 | 0.02 | 2.167 | 4.27 | 0.00 | 2.1 | 97.9 | 0.0 | -2.53 | 0.76 | 0.87 | 2.40 | 3.7 | 0.002 | 0.55 | 0.0 | 0.03 | 15.25 | 0.00 | 2.116 | 3.29 | 0.38 | 2.0 | 98.0 | 0.0 | 1.85 | 1.24 | 0.78 | 0.87 | 1.54 | 26278 | 3388 | 42 | 0 | 210 | 0 | 0 | logfile |
✔ | 6Vo0 | 21256 | 2023-11-17 | 2020-01-29 | 3.52 | 3.99 | — | 3.9 | 0.022 | 1.80 | 0.0 | 0.10 | 10.05 | 0.01 | 2.380 | 1.66 | 0.00 | 3.6 | 95.6 | 0.8 | 0.22 | 0.77 | 0.83 | 2.86 | 3.9 | 0.003 | 0.75 | 0.0 | 0.04 | 15.01 | 0.00 | 2.147 | 10.95 | 0.58 | 5.9 | 93.4 | 0.7 | -0.72 | 1.97 | 0.75 | 0.81 | 1.96 | 19494 | 2364 | 36 | 0 | 72 | 0 | 0 | logfile |
✔ | 7oVB | 13083 | 2023-11-15 | 2021-06-14 | 3.61 | 4.01 | — | 3.9 | 0.013 | 1.13 | 0.0 | 0.06 | 15.02 | 0.01 | 1.960 | 22.05 | 0.09 | 11.6 | 88.4 | 0.0 | -4.16 | 0.79 | 0.81 | 2.01 | 3.9 | 0.003 | 0.62 | 0.0 | 0.04 | 16.26 | 0.00 | 2.155 | 10.72 | 0.27 | 3.2 | 96.8 | 0.0 | -0.68 | 0.53 | 0.78 | 0.78 | 1.09 | 10854 | 1405 | 6 | 0 | 1 | 0 | 0 | logfile |
✔ | 7AGG | 11779 | 2023-11-14 | 2020-09-22 | 3.3 | 3.68 | — | 3.6 | 0.007 | 0.79 | 0.0 | 0.05 | 13.16 | 0.01 | 1.980 | 6.95 | 0.00 | 4.2 | 95.8 | 0.0 | -1.18 | 0.83 | 0.80 | 3.30 | 3.6 | 0.005 | 0.72 | 0.0 | 0.05 | 14.99 | 0.00 | 2.074 | 14.39 | 0.32 | 5.5 | 94.5 | 0.0 | -0.89 | 2.99 | 0.82 | 0.85 | 3.53 | 8252 | 1056 | 5 | 0 | 0 | 0 | 0 | logfile |
✔ | 6S7P | 10111 | 2023-11-14 | 2019-07-05 | 3.2 | 3.38 | — | 3.4 | 0.009 | 1.13 | 0.0 | 0.08 | 10.36 | 0.01 | 2.085 | 3.44 | 0.33 | 2.8 | 97.2 | 0.0 | -3.03 | 0.65 | 0.83 | 4.30 | 3.4 | 0.003 | 0.54 | 0.0 | 0.04 | 14.25 | 0.00 | 1.994 | 5.67 | 0.11 | 2.0 | 98.0 | 0.0 | 1.00 | 0.55 | 0.66 | 0.85 | 2.59 | 9028 | 1128 | 1 | 0 | 11 | 0 | 0 | logfile |
✔ | 6DRJ | 7999 | 2023-11-21 | 2018-06-12 | 3.3 | 3.80 | — | 3.7 | 0.007 | 1.13 | 8.0 | 0.07 | 10.90 | 0.01 | 2.093 | 5.57 | 0.14 | 4.4 | 95.6 | 0.0 | -3.18 | 0.67 | 0.79 | 1.95 | 3.7 | 0.002 | 0.59 | 0.0 | 0.04 | 14.03 | 0.00 | 2.183 | 4.74 | 0.39 | 2.7 | 97.3 | 0.0 | 0.35 | 1.22 | 0.68 | 0.82 | 1.64 | 35516 | 5064 | 8 | 0 | 8 | 0 | 0 | logfile |
✘ | 6VXK | 21442 | 2023-11-17 | 2020-02-22 | 3.1 | 3.57 | — | 3.2 | 0.011 | 0.84 | 0.0 | 0.05 | 14.73 | 0.00 | 2.122 | 15.37 | 8.05 | 10.5 | 89.5 | 0.0 | -3.69 | 0.86 | 0.88 | 3.00 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 17418 | 2254 | 8 | 0 | 18 | 0 | 0 | logfile |
✔ | 7TYW | 26196 | 2023-11-15 | 2022-02-14 | 3.0 | 2.92 | 2.97 | 3.1 | 0.011 | 0.68 | 1.0 | 0.04 | 13.10 | 0.00 | 2.199 | 5.38 | 1.41 | 1.9 | 98.1 | 0.0 | -4.19 | 0.58 | 0.75 | 2.71 | 3.1 | 0.003 | 0.59 | 0.0 | 0.04 | 16.01 | 0.00 | 2.201 | 8.46 | 3.12 | 2.5 | 97.5 | 0.0 | -0.04 | 0.58 | 0.59 | 0.79 | 2.54 | 9779 | 1256 | 10 | 0 | 7 | 1 | 0 | logfile |
✔ | 8HBV | 34644 | 2023-11-13 | 2022-10-31 | 2.51 | 2.70 | 2.51 | 2.7 | 0.009 | 0.96 | 0.0 | 0.05 | 14.34 | 0.01 | 2.209 | 8.10 | 0.00 | 2.0 | 98.0 | 0.0 | 1.54 | 0.61 | 0.88 | 4.41 | 2.7 | 0.003 | 0.52 | 0.0 | 0.04 | 16.74 | 0.00 | 2.228 | 6.11 | 0.59 | 2.0 | 98.0 | 0.0 | 2.56 | 1.72 | 0.59 | 0.89 | 3.85 | 3279 | 414 | 3 | 0 | 3 | 0 | 0 | logfile |
✔ | 6PXV | 20522 | 2023-11-17 | 2019-07-27 | 3.2 | 3.81 | — | 3.3 | 0.010 | 1.39 | 8.0 | 0.09 | 10.11 | 0.01 | 2.127 | 8.05 | 0.36 | 9.3 | 89.1 | 1.6 | -3.83 | 0.77 | 0.74 | 2.45 | 3.3 | 0.003 | 0.70 | 0.0 | 0.04 | 13.02 | 0.00 | 2.162 | 8.84 | 0.06 | 8.8 | 90.9 | 0.3 | -1.51 | 1.79 | 0.81 | 0.82 | 2.16 | 14774 | 1830 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 7SL3 | 25190 | 2023-11-17 | 2021-10-22 | 3.4 | 3.65 | — | 3.5 | 0.002 | 0.54 | 0.0 | 0.04 | 13.25 | 0.00 | 2.238 | 8.44 | 0.32 | 6.4 | 93.4 | 0.2 | -0.71 | 0.80 | 0.81 | 2.46 | 3.5 | 0.004 | 0.57 | 0.0 | 0.04 | 14.42 | 0.00 | 2.193 | 9.89 | 0.13 | 6.4 | 93.6 | 0.0 | -0.80 | 1.14 | 0.81 | 0.84 | 2.59 | 14016 | 1736 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 7CA3 | 30323 | 2023-11-17 | 2020-06-08 | 4.5 | 4.65 | — | 4.5 | 0.017 | 1.30 | 4.0 | 0.17 | 15.80 | 0.01 | 1.348 | 20.50 | 1.01 | 15.2 | 84.2 | 0.6 | -4.98 | 0.62 | 0.69 | — | 4.5 | 0.003 | 0.78 | 2.0 | 0.10 | 14.13 | 0.00 | 1.902 | 16.31 | 0.00 | 8.2 | 91.7 | 0.1 | -2.12 | 1.16 | 0.65 | 0.80 | — | 19862 | 1350 | 4 | 0 | 4 | 0 | 9307 | logfile |
✔ | 7VCV | 31897 | 2023-11-22 | 2021-09-04 | 3.21 | 3.32 | — | 3.2 | 0.012 | 1.08 | 0.0 | 0.06 | 9.72 | 0.01 | 2.097 | 3.88 | 0.00 | 6.2 | 93.8 | 0.0 | -3.61 | 0.75 | 0.81 | 2.50 | 3.3 | 0.003 | 0.54 | 0.0 | 0.04 | 14.12 | 0.00 | 2.069 | 5.45 | 0.08 | 4.9 | 95.1 | 0.0 | 0.13 | 1.25 | 0.73 | 0.82 | 1.69 | 36036 | 4548 | 12 | 0 | 24 | 0 | 0 | logfile |
✔ | 7EPD | 31238 | 2023-11-17 | 2021-04-26 | 3.9 | 2.74 | — | 3.5 | 0.002 | 0.45 | 0.0 | 0.04 | 12.27 | 0.00 | 2.232 | 7.06 | 0.00 | 4.0 | 96.0 | 0.0 | -2.46 | 0.69 | 0.63 | 0.57 | 3.5 | 0.004 | 0.64 | 0.0 | 0.04 | 14.15 | 0.00 | 2.224 | 13.87 | 0.45 | 5.3 | 94.7 | 0.0 | 0.04 | 1.20 | 0.75 | 0.74 | 1.44 | 10710 | 1569 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 8DTM | 27705 | 2023-11-15 | 2022-07-26 | 3.5 | 3.58 | 3.45 | 3.6 | 0.003 | 0.56 | 0.0 | 0.04 | 16.33 | 0.00 | 2.132 | 7.74 | 0.41 | 5.8 | 94.2 | 0.0 | -0.79 | 0.71 | 0.80 | 2.96 | 3.6 | 0.002 | 0.52 | 0.0 | 0.04 | 16.81 | 0.00 | 2.129 | 7.19 | 0.55 | 5.4 | 94.6 | 0.0 | -0.64 | 0.25 | 0.71 | 0.81 | 2.59 | 6498 | 802 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 7NH9 | 12321 | 2023-11-15 | 2021-02-10 | 3.03 | 3.58 | — | 3.4 | 0.007 | 0.80 | 0.0 | 0.04 | 14.80 | 0.00 | 2.236 | 12.71 | 3.31 | 11.7 | 88.3 | 0.0 | -2.35 | 0.75 | 0.84 | 2.46 | 3.4 | 0.003 | 0.66 | 0.0 | 0.04 | 16.04 | 0.00 | 2.252 | 11.90 | 0.07 | 9.2 | 90.8 | 0.0 | 0.93 | 0.52 | 0.76 | 0.86 | 2.43 | 13120 | 1635 | 5 | 0 | 0 | 0 | 0 | logfile |