The table shows a selection of parameters. Activate more columns using
the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 8JoL | 36459 | 2023-12-08 | 2023-06-07 | 3.0 | 3.98 | 2.98 | 3.4 | 0.009 | 1.46 | 0.0 | 0.07 | 18.20 | 0.01 | 2.214 | 35.79 | 16.43 | 12.3 | 86.8 | 0.8 | -4.77 | 0.56 | 0.70 | 0.79 | 3.4 | 0.003 | 0.83 | 0.0 | 0.04 | 16.43 | 0.00 | 1.949 | 9.47 | 1.65 | 3.4 | 96.6 | 0.0 | 0.82 | 1.53 | 0.62 | 0.88 | 1.65 | 8513 | 1087 | 5 | 0 | 4 | 0 | 0 | logfile |
✔ | 6WBY | 21601 | 2023-12-08 | 2020-03-27 | 3.4 | 3.73 | 3.45 | 3.6 | 0.010 | 1.04 | 0.0 | 0.06 | 12.68 | 0.01 | 2.042 | 3.28 | 0.32 | 6.3 | 93.6 | 0.1 | -5.12 | 0.78 | 0.87 | 3.21 | 3.6 | 0.003 | 0.64 | 0.0 | 0.05 | 13.49 | 0.00 | 2.197 | 5.85 | 0.00 | 5.0 | 95.0 | 0.0 | -0.51 | 0.36 | 0.77 | 0.87 | 2.48 | 9156 | 1250 | 1 | 0 | 2 | 0 | 0 | logfile |
✔ | 6M5R | 30090 | 2023-12-09 | 2020-03-11 | 3.5 | 3.68 | — | 3.6 | 0.005 | 0.77 | 2.0 | 0.05 | 15.65 | 0.00 | 2.015 | 11.54 | 5.29 | 9.2 | 90.7 | 0.1 | -3.65 | 0.61 | 0.80 | 2.43 | 3.6 | 0.005 | 0.73 | 0.0 | 0.04 | 16.47 | 0.00 | 2.100 | 10.99 | 0.26 | 9.9 | 90.0 | 0.1 | -1.08 | 0.63 | 0.61 | 0.81 | 2.41 | 11055 | 1440 | 4 | 0 | 2 | 0 | 0 | logfile |
✔ | 7UM5 | 26597 | 2023-12-08 | 2022-04-06 | 2.73 | 2.12 | 2.75 | 1.9 | 0.003 | 0.57 | 0.0 | 0.04 | 11.84 | 0.00 | 2.281 | 2.29 | 0.00 | 3.8 | 96.2 | 0.0 | -0.74 | 0.82 | 0.82 | 4.55 | 1.9 | 0.003 | 0.61 | 0.0 | 0.04 | 14.14 | 0.00 | 2.252 | 3.96 | 1.06 | 4.1 | 95.9 | 0.0 | 0.30 | 0.34 | 0.83 | 0.83 | 3.86 | 8277 | 1104 | 6 | 0 | 1 | 1 | 0 | logfile |
✔ | 7WY5 | 32884 | 2023-12-08 | 2022-02-15 | 2.83 | 2.25 | — | 2.0 | 0.005 | 0.75 | 0.0 | 0.05 | 12.83 | 0.00 | 1.986 | 1.32 | 0.00 | 5.4 | 94.6 | 0.0 | -0.28 | 0.77 | 0.76 | 3.50 | 2.0 | 0.003 | 0.60 | 0.0 | 0.04 | 15.45 | 0.00 | 2.154 | 5.58 | 0.92 | 3.5 | 96.5 | 0.0 | 0.77 | 0.39 | 0.78 | 0.78 | 2.47 | 8009 | 1013 | 5 | 0 | 0 | 0 | 0 | logfile |
✔ | 7Y64 | 33633 | 2023-12-09 | 2022-06-18 | 2.9 | 2.25 | 2.85 | 2.1 | 0.002 | 0.58 | 0.0 | 0.04 | 12.47 | 0.00 | 2.139 | 5.05 | 0.19 | 2.5 | 97.5 | 0.0 | 0.58 | 0.76 | 0.77 | 3.26 | 2.1 | 0.004 | 0.60 | 0.0 | 0.04 | 15.65 | 0.00 | 2.186 | 5.00 | 2.31 | 3.8 | 96.2 | 0.0 | 0.75 | 0.39 | 0.79 | 0.81 | 2.89 | 9520 | 1218 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 8EL7 | 28223 | 2023-12-07 | 2022-09-23 | 2.8 | 3.11 | 2.95 | 3.1 | 0.006 | 0.61 | 0.0 | 0.04 | 13.13 | 0.00 | 2.295 | 2.43 | 0.00 | 1.7 | 98.3 | 0.0 | 0.97 | 0.57 | 0.80 | 2.31 | 3.1 | 0.002 | 0.46 | 0.0 | 0.04 | 14.99 | 0.00 | 2.314 | 1.88 | 1.74 | 2.2 | 97.8 | 0.0 | 0.68 | 0.27 | 0.58 | 0.81 | 2.13 | 4562 | 604 | 2 | 0 | 0 | 5 | 0 | logfile |
✔ | 8EL8 | 28224 | 2023-12-07 | 2022-09-23 | 3.2 | 3.53 | 3.33 | 3.5 | 0.007 | 0.70 | 0.0 | 0.04 | 13.20 | 0.00 | 2.403 | 2.38 | 0.00 | 1.7 | 98.3 | 0.0 | 0.75 | 0.66 | 0.85 | 2.31 | 3.5 | 0.003 | 0.45 | 0.0 | 0.04 | 15.16 | 0.00 | 2.353 | 2.27 | 0.00 | 2.4 | 97.6 | 0.0 | 1.11 | 0.26 | 0.67 | 0.85 | 2.07 | 4467 | 597 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 6oKS | 20103 | 2023-12-10 | 2019-04-15 | 4.2 | 4.44 | — | 4.3 | 0.008 | 1.15 | 0.0 | 0.05 | 17.36 | 0.01 | 2.299 | 5.88 | 9.80 | 18.3 | 81.7 | 0.0 | -5.50 | 0.78 | 0.81 | — | 4.3 | 0.004 | 0.84 | 0.0 | 0.05 | 14.37 | 0.01 | 2.223 | 15.59 | 0.00 | 16.0 | 84.0 | 0.0 | -4.93 | 2.23 | 0.79 | 0.82 | — | 13244 | 1610 | 14 | 0 | 0 | 0 | 0 | logfile |
✔ | 8H8J | 34549 | 2023-12-08 | 2022-10-23 | 3.2 | 2.26 | 3.27 | 2.1 | 0.003 | 0.64 | 0.0 | 0.04 | 10.39 | 0.00 | 1.939 | 9.85 | 2.59 | 2.3 | 97.6 | 0.1 | -0.78 | 0.71 | 0.72 | 2.45 | 2.0 | 0.003 | 0.64 | 0.0 | 0.04 | 13.96 | 0.00 | 2.022 | 13.95 | 0.65 | 3.9 | 96.1 | 0.0 | 0.62 | 0.56 | 0.74 | 0.77 | 2.36 | 8842 | 1139 | 6 | 0 | 5 | 0 | 0 | logfile |
✔ | 7SZi | 25567 | 2023-12-08 | 2021-11-27 | 2.7 | 3.34 | — | 3.1 | 0.002 | 0.44 | 0.0 | 0.04 | 13.00 | 0.00 | 2.265 | 3.93 | 0.12 | 3.5 | 96.4 | 0.1 | 0.36 | 0.70 | 0.86 | 5.04 | 3.1 | 0.004 | 0.54 | 0.0 | 0.04 | 14.28 | 0.00 | 2.186 | 3.74 | 0.96 | 3.8 | 96.1 | 0.1 | 0.05 | 0.24 | 0.72 | 0.88 | 5.17 | 8089 | 1038 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 7S8N | 24898 | 2023-12-08 | 2021-09-18 | 2.9 | 2.20 | 2.92 | 2.1 | 0.012 | 0.90 | 0.0 | 0.06 | 13.07 | 0.01 | 2.202 | 4.10 | 0.00 | 5.1 | 94.9 | 0.0 | -0.33 | 0.79 | 0.80 | 3.96 | 2.0 | 0.002 | 0.55 | 0.0 | 0.04 | 15.70 | 0.00 | 2.221 | 3.59 | 0.98 | 2.1 | 97.9 | 0.0 | 0.87 | 1.01 | 0.82 | 0.82 | 2.80 | 8154 | 1090 | 6 | 0 | 1 | 0 | 0 | logfile |
✔ | 7VUH | 32128 | 2023-12-08 | 2021-11-02 | 3.22 | 2.19 | — | 1.9 | 0.004 | 0.66 | 0.0 | 0.04 | 13.68 | 0.00 | 2.099 | 13.73 | 0.00 | 6.2 | 93.8 | 0.0 | -1.87 | 0.71 | 0.69 | 2.81 | 1.9 | 0.004 | 0.65 | 0.0 | 0.04 | 15.92 | 0.00 | 2.061 | 14.58 | 0.22 | 6.0 | 94.0 | 0.0 | -1.32 | 0.37 | 0.72 | 0.73 | 2.34 | 8302 | 1042 | 5 | 0 | 1 | 0 | 0 | logfile |
✔ | 7U7N | 26382 | 2023-12-08 | 2022-03-07 | 3.47 | 2.42 | 3.51 | 2.0 | 0.004 | 0.69 | 0.0 | 0.05 | 16.83 | 0.01 | 2.164 | 8.81 | 0.89 | 2.6 | 97.4 | 0.0 | 1.04 | 0.74 | 0.76 | 2.33 | 2.1 | 0.003 | 0.64 | 0.0 | 0.04 | 16.74 | 0.00 | 2.121 | 9.44 | 0.51 | 3.1 | 96.9 | 0.0 | 1.09 | 0.35 | 0.73 | 0.77 | 2.17 | 7284 | 884 | 10 | 0 | 16 | 0 | 0 | logfile |
✔ | 6oVH | 20212 | 2023-12-09 | 2019-05-07 | 2.6 | 2.81 | 2.71 | 2.8 | 0.014 | 1.10 | 0.0 | 0.04 | 17.48 | 0.01 | 1.203 | 1.15 | 4.55 | 1.0 | 99.0 | 0.0 | -6.34 | 0.75 | 0.87 | 4.63 | 2.8 | 0.003 | 0.75 | 0.0 | 0.04 | 18.69 | 0.00 | 2.055 | 2.87 | 0.38 | 0.8 | 99.2 | 0.0 | 2.63 | 0.98 | 0.77 | 0.89 | 3.77 | 10895 | 1272 | 36 | 0 | 68 | 171 | 0 | logfile |
✔ | 7S8P | 24900 | 2023-12-08 | 2021-09-18 | 2.6 | 2.11 | 2.62 | 1.8 | 0.005 | 0.75 | 0.0 | 0.05 | 12.74 | 0.00 | 2.183 | 3.18 | 0.00 | 5.8 | 94.2 | 0.0 | -2.01 | 0.73 | 0.75 | 4.73 | 1.9 | 0.003 | 0.62 | 0.0 | 0.04 | 15.34 | 0.00 | 2.120 | 3.18 | 1.62 | 5.1 | 94.9 | 0.0 | 0.50 | 0.37 | 0.84 | 0.84 | 3.79 | 8093 | 1089 | 5 | 0 | 1 | 0 | 0 | logfile |
✔ | 8EU8 | 28608 | 2023-12-10 | 2022-10-18 | 3.73 | 2.48 | 3.71 | 2.2 | 0.014 | 1.81 | 0.0 | 0.10 | 12.70 | 0.01 | 1.755 | 3.29 | 0.47 | 5.4 | 94.6 | 0.0 | -0.91 | 0.73 | 0.74 | 3.31 | 2.3 | 0.004 | 0.75 | 0.0 | 0.05 | 15.43 | 0.00 | 2.167 | 9.80 | 0.60 | 4.0 | 96.0 | 0.0 | -0.14 | 0.68 | 0.75 | 0.75 | 1.86 | 14181 | 1692 | 24 | 0 | 63 | 0 | 0 | logfile |
✔ | 8PPo | 17806 | 2023-12-07 | 2023-07-07 | 2.0 | 2.30 | 1.95 | 2.2 | 0.008 | 1.20 | 1.0 | 0.07 | 13.41 | 0.01 | 2.625 | 0.29 | 0.00 | 6.7 | 93.3 | 0.0 | 0.71 | 0.58 | 0.84 | 6.50 | 2.2 | 0.004 | 0.53 | 0.0 | 0.06 | 13.89 | 0.00 | 2.300 | 0.00 | 1.04 | 0.0 | 100.0 | 0.0 | 1.18 | 0.38 | 0.50 | 0.88 | 5.61 | 1696 | 240 | 16 | 0 | 0 | 0 | 0 | logfile |
✔ | 7WZ7 | 32905 | 2023-12-08 | 2022-02-17 | 2.83 | 2.26 | — | 2.0 | 0.010 | 0.95 | 0.0 | 0.06 | 11.50 | 0.01 | 2.230 | 6.56 | 0.00 | 5.4 | 94.6 | 0.0 | -0.69 | 0.71 | 0.71 | 2.86 | 2.0 | 0.004 | 0.68 | 0.0 | 0.04 | 14.95 | 0.00 | 2.140 | 12.43 | 2.31 | 4.3 | 95.7 | 0.0 | 0.40 | 1.18 | 0.72 | 0.73 | 1.49 | 8676 | 1108 | 5 | 0 | 0 | 0 | 0 | logfile |
✔ | 7RTM | 24683 | 2023-12-08 | 2021-08-13 | 3.4 | 3.54 | 3.61 | 20.0 | 0.031 | 3.05 | 44.0 | 0.18 | 16.56 | 0.03 | 1.051 | 1.40 | 2.80 | 6.8 | 93.0 | 0.3 | -1.12 | 0.10 | 0.04 | 0.21 | 3.5 | 0.004 | 0.83 | 0.0 | 0.04 | 15.79 | 0.00 | 2.119 | 11.39 | 0.40 | 5.5 | 94.4 | 0.1 | 0.27 | 4.69 | 0.66 | 0.77 | 1.44 | 9161 | 1142 | 6 | 0 | 12 | 0 | 0 | logfile |