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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✘ | 6SL5 | 10236 | 2023-08-27 | 2019-08-18 | 2.84 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 43789 | 3744 | 36 | 0 | 292 | 0 | 0 | logfile |
✔ | 7T11 | 25587 | 2023-08-10 | 2021-11-30 | 2.7 | 2.94 | — | 3.0 | 0.004 | 0.61 | 0.0 | 0.04 | 10.76 | 0.00 | 2.107 | 3.46 | 0.27 | 2.4 | 97.6 | 0.0 | 0.96 | 0.60 | 0.74 | 3.90 | 3.0 | 0.005 | 0.68 | 0.0 | 0.04 | 13.72 | 0.00 | 2.232 | 3.33 | 0.93 | 3.5 | 96.5 | 0.0 | 0.85 | 0.43 | 0.62 | 0.80 | 3.68 | 8151 | 1132 | 6 | 0 | 2 | 0 | 0 | logfile |
✘ | 7SL7 | 25193 | 2023-08-15 | 2021-10-22 | 3.1 | 3.35 | — | 3.4 | 0.002 | 0.56 | 0.0 | 0.04 | 13.08 | 0.00 | 2.149 | 8.91 | 0.24 | 5.5 | 94.2 | 0.3 | -0.86 | 0.77 | 0.82 | 3.06 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 14732 | 1826 | 10 | 0 | 0 | 0 | 0 | logfile |
✔ | 7MHZ | 23837 | 2023-08-09 | 2021-04-16 | 3.2 | 3.82 | — | 3.7 | 0.005 | 0.77 | 0.0 | 1.63 | 19.46 | 0.00 | 2.210 | 7.55 | 0.00 | 3.4 | 96.6 | 0.0 | 1.45 | 0.61 | 0.79 | 2.94 | 3.7 | 0.003 | 2.46 | 0.0 | 0.26 | 16.38 | 0.00 | 2.184 | 6.70 | 0.17 | 2.7 | 97.3 | 0.0 | 1.74 | 0.33 | 0.61 | 0.81 | 2.69 | 6189 | 723 | 6 | 0 | 15 | 0 | 0 | logfile |
✔ | 7AK5 | 11810 | 2023-08-13 | 2020-09-29 | 3.17 | 2.97 | 3.17 | 3.1 | 0.005 | 0.73 | 0.0 | 1.04 | 15.21 | 0.00 | 1.865 | 7.38 | 0.01 | 5.9 | 94.0 | 0.0 | -3.68 | 0.66 | 0.82 | 3.16 | 3.1 | 0.008 | 1.59 | 0.0 | 0.31 | 16.55 | 0.00 | 2.139 | 8.24 | 0.17 | 3.5 | 96.5 | 0.0 | 0.51 | 1.48 | 0.68 | 0.86 | 2.52 | 65895 | 8069 | 64 | 0 | 28 | 0 | 0 | logfile |
✔ | 8AB7 | 15313 | 2023-08-22 | 2022-07-04 | 3.3 | 2.57 | 3.15 | 3.1 | 0.013 | 2.00 | 78.0 | 0.12 | 18.36 | 0.01 | 1.874 | 7.05 | 5.54 | 2.9 | 97.0 | 0.1 | -1.88 | 0.61 | 0.84 | 3.31 | 2.9 | 0.006 | 0.69 | 0.0 | 0.05 | 17.70 | 0.00 | 2.020 | 11.05 | 0.52 | 2.3 | 97.6 | 0.1 | 0.81 | 1.37 | 0.65 | 0.85 | 2.81 | 33654 | 4124 | 34 | 0 | 36 | 0 | 0 | logfile |
✔ | 7UZ7 | 26881 | 2023-08-21 | 2022-05-08 | 2.9 | 3.46 | 3.07 | 3.4 | 0.005 | 0.61 | 0.0 | 0.04 | 12.96 | 0.01 | 2.121 | 9.12 | 0.00 | 3.5 | 96.5 | 0.0 | 0.04 | 0.71 | 0.78 | 2.76 | 3.4 | 0.003 | 0.61 | 0.0 | 0.04 | 14.92 | 0.00 | 2.185 | 9.75 | 1.48 | 3.6 | 96.4 | 0.0 | 0.00 | 0.36 | 0.69 | 0.79 | 2.47 | 30552 | 3861 | 15 | 0 | 45 | 0 | 0 | logfile |
✘ | 7N4U | 24178 | 2023-08-14 | 2021-06-04 | 3.34 | 3.91 | — | 3.8 | 0.014 | 1.80 | 0.0 | 0.29 | 15.32 | 0.01 | 2.102 | 4.84 | 1.79 | 5.3 | 94.5 | 0.2 | -2.74 | 0.58 | 0.74 | 1.92 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 15396 | 1906 | 10 | 0 | 28 | 0 | 0 | logfile |
✔ | 8ADi | 15363 | 2023-08-17 | 2022-07-08 | 3.4 | 3.67 | 3.39 | 3.7 | 0.003 | 0.52 | 0.0 | 0.04 | 14.25 | 0.01 | 1.491 | 4.93 | 0.08 | 4.4 | 95.6 | 0.0 | -0.36 | 0.69 | 0.83 | 3.58 | 3.7 | 0.003 | 0.46 | 0.0 | 0.04 | 14.95 | 0.00 | 1.958 | 5.31 | 0.40 | 5.3 | 94.7 | 0.0 | -0.07 | 0.24 | 0.66 | 0.85 | 3.10 | 23141 | 1505 | 6 | 0 | 0 | 0 | 11353 | logfile |
✘ | 7BC4 | 12138 | 2023-08-19 | 2020-12-18 | 3.1 | 2.99 | 2.99 | 3.0 | 0.008 | 0.88 | 1.0 | 0.06 | 15.49 | 0.01 | 2.285 | 5.33 | 1.19 | 6.4 | 93.6 | 0.0 | -5.07 | 0.51 | 0.85 | 3.25 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 27610 | 3514 | 2 | 0 | 1 | 0 | 0 | logfile |
✔ | 7D4Q | 30576 | 2023-08-17 | 2020-09-24 | 2.74 | 2.99 | 2.80 | 3.0 | 0.009 | 0.78 | 0.0 | 0.04 | 12.13 | 0.00 | 2.254 | 6.34 | 0.67 | 1.4 | 98.6 | 0.0 | 2.70 | 0.47 | 0.71 | 3.84 | 3.0 | 0.004 | 0.53 | 0.0 | 0.04 | 15.85 | 0.00 | 2.191 | 6.74 | 0.71 | 1.9 | 98.1 | 0.0 | 2.40 | 0.48 | 0.69 | 0.88 | 4.46 | 22388 | 2672 | 8 | 0 | 24 | 0 | 0 | logfile |
✔ | 5WQ8 | 6676 | 2023-08-10 | 2016-11-23 | 3.26 | 3.41 | — | 3.3 | 0.009 | 1.18 | 0.0 | 0.06 | 10.83 | 0.01 | 1.654 | 27.56 | 0.24 | 4.8 | 95.0 | 0.2 | -2.76 | 0.72 | 0.83 | 2.86 | 3.3 | 0.003 | 0.65 | 0.0 | 0.05 | 14.43 | 0.00 | 2.173 | 10.95 | 0.29 | 3.2 | 96.6 | 0.2 | 0.01 | 1.47 | 0.71 | 0.83 | 1.72 | 56460 | 7440 | 15 | 0 | 0 | 0 | 0 | logfile |
✔ | 7WKA | 32564 | 2023-08-21 | 2022-01-08 | 3.64 | 3.27 | — | 3.6 | 0.005 | 0.79 | 1.0 | 0.05 | 8.14 | 0.01 | 2.353 | 3.18 | 0.23 | 3.7 | 96.1 | 0.1 | -2.58 | 0.70 | 0.64 | 0.56 | 3.7 | 0.005 | 0.81 | 0.0 | 0.05 | 13.97 | 0.00 | 2.073 | 18.03 | 0.91 | 4.6 | 95.4 | 0.1 | -0.79 | 1.63 | 0.77 | 0.74 | 1.25 | 31353 | 4017 | 7 | 0 | 0 | 0 | 0 | logfile |
✔ | 7YQZ | 34040 | 2023-08-19 | 2022-08-08 | 3.84 | 4.12 | 3.90 | 3.9 | 0.005 | 0.80 | 2.0 | 0.05 | 14.14 | 0.01 | 1.625 | 6.53 | 0.07 | 6.8 | 92.9 | 0.3 | -2.84 | 0.80 | 0.80 | 1.56 | 3.9 | 0.003 | 0.62 | 0.0 | 0.04 | 15.46 | 0.00 | 2.135 | 10.60 | 0.07 | 7.0 | 93.0 | 0.0 | -1.61 | 1.16 | 0.80 | 0.81 | 1.34 | 28266 | 3531 | 12 | 0 | 53 | 0 | 0 | logfile |
✔ | 6VoH | 21264 | 2023-08-24 | 2020-01-30 | 4.16 | 3.96 | — | 4.0 | 0.005 | 0.99 | 0.0 | 0.05 | 15.53 | 0.01 | 2.172 | 14.16 | 0.49 | 7.7 | 92.0 | 0.3 | -3.96 | 0.70 | 0.74 | — | 3.9 | 0.003 | 0.78 | 0.0 | 0.04 | 14.97 | 0.00 | 2.104 | 18.24 | 0.00 | 7.9 | 91.9 | 0.2 | -1.36 | 0.69 | 0.69 | 0.72 | — | 39159 | 5193 | 31 | 0 | 5 | 0 | 0 | logfile |
✘ | 7RR9 | 24656 | 2023-08-11 | 2021-08-09 | 3.5 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 9094 | 1120 | 4 | 0 | 8 | 0 | 0 | logfile |
✔ | 7WSH | 32758 | 2023-08-12 | 2022-01-29 | 2.89 | 3.01 | — | 3.0 | 0.003 | 0.45 | 0.0 | 0.04 | 9.90 | 0.00 | 2.140 | 5.01 | 0.72 | 1.9 | 98.1 | 0.0 | -0.03 | 0.69 | 0.82 | 4.30 | 3.0 | 0.003 | 0.59 | 0.0 | 0.04 | 15.50 | 0.00 | 2.123 | 9.77 | 2.01 | 1.8 | 98.2 | 0.0 | 1.20 | 0.84 | 0.72 | 0.85 | 3.53 | 6457 | 793 | 4 | 0 | 2 | 0 | 0 | logfile |
✔ | 7E27 | 30953 | 2023-08-12 | 2021-02-04 | 2.29 | 2.55 | — | 2.6 | 0.007 | 0.91 | 0.0 | 0.06 | 14.59 | 0.01 | 2.322 | 2.20 | 0.42 | 1.4 | 98.6 | 0.0 | -2.60 | 0.63 | 0.86 | 4.69 | 2.5 | 0.004 | 0.63 | 0.0 | 0.05 | 15.83 | 0.00 | 2.192 | 3.34 | 2.03 | 1.1 | 98.9 | 0.0 | 1.34 | 0.40 | 0.64 | 0.87 | 4.68 | 11475 | 1435 | 15 | 0 | 5 | 90 | 0 | logfile |
✔ | 6M3W | 30072 | 2023-08-10 | 2020-03-04 | 3.9 | 4.04 | — | 3.9 | 0.011 | 1.31 | 0.0 | 0.08 | 11.59 | 0.01 | 2.264 | 9.72 | 0.66 | 11.1 | 88.9 | 0.0 | -4.25 | 0.82 | 0.78 | 1.15 | 3.9 | 0.004 | 0.80 | 0.0 | 0.06 | 16.07 | 0.01 | 2.138 | 15.98 | 1.00 | 7.5 | 92.5 | 0.0 | -1.66 | 0.95 | 0.82 | 0.78 | 0.75 | 8307 | 1032 | 6 | 0 | 24 | 0 | 0 | logfile |
✔ | 8H8X | 34551 | 2023-08-13 | 2022-10-24 | 3.92 | 4.03 | 3.85 | 3.9 | 0.011 | 0.89 | 0.0 | 0.05 | 9.89 | 0.01 | 2.101 | 4.03 | 0.00 | 8.2 | 91.8 | 0.0 | -3.57 | 0.79 | 0.76 | 2.31 | 3.9 | 0.004 | 0.60 | 0.0 | 0.04 | 13.05 | 0.00 | 2.028 | 7.23 | 0.13 | 6.6 | 93.4 | 0.0 | -0.11 | 1.95 | 0.79 | 0.77 | 1.80 | 13418 | 850 | 1 | 0 | 0 | 0 | 6667 | logfile |