The table shows a selection of parameters. Activate more columns using
the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7Q9G | 13869 | 2023-08-20 | 2021-11-12 | 3.3 | 3.52 | — | 3.4 | 0.003 | 0.50 | 0.0 | 0.04 | 9.49 | 0.00 | 2.034 | 4.08 | 0.67 | 3.1 | 96.9 | 0.0 | -0.07 | 0.82 | 0.80 | 2.69 | 3.4 | 0.003 | 0.55 | 0.0 | 0.04 | 12.53 | 0.00 | 2.214 | 7.62 | 0.25 | 3.2 | 96.8 | 0.0 | 0.49 | 0.58 | 0.84 | 0.85 | 2.43 | 28973 | 3632 | 22 | 0 | 52 | 0 | 0 | logfile |
✔ | 6EZJ | 3999 | 2023-08-22 | 2017-11-15 | 3.1 | 3.22 | — | 3.2 | 0.007 | 1.12 | 0.0 | 0.06 | 10.82 | 0.01 | 2.111 | 3.79 | 0.00 | 8.2 | 91.8 | 0.0 | -5.02 | 0.68 | 0.77 | 3.52 | 3.2 | 0.008 | 0.99 | 0.0 | 0.06 | 15.78 | 0.01 | 1.900 | 10.81 | 0.90 | 9.7 | 90.3 | 0.0 | -2.26 | 1.96 | 0.72 | 0.82 | 3.48 | 33600 | 4440 | 48 | 0 | 72 | 0 | 0 | logfile |
✔ | 7TPT | 26063 | 2023-08-27 | 2022-01-26 | 3.9 | 2.60 | 3.92 | 3.8 | 0.009 | 0.90 | 5.0 | 0.05 | 14.28 | 0.00 | 1.331 | 10.02 | 0.45 | 4.0 | 96.0 | 0.0 | 1.17 | 0.68 | 0.61 | 1.18 | 2.2 | 0.003 | 0.81 | 0.0 | 0.05 | 15.98 | 0.00 | 1.902 | 12.63 | 0.81 | 5.2 | 94.8 | 0.0 | -0.60 | 1.31 | 0.70 | 0.66 | 1.42 | 50755 | 7217 | 52 | 0 | 47 | 0 | 0 | logfile |
✔ | 8DBZ | 27318 | 2023-08-10 | 2022-06-15 | 4.1 | 4.31 | 4.14 | 4.2 | 0.003 | 0.73 | 0.0 | 0.05 | 12.61 | 0.01 | 2.101 | 19.43 | 0.00 | 6.5 | 93.4 | 0.1 | -1.42 | 0.62 | 0.62 | — | 4.2 | 0.004 | 0.79 | 0.0 | 0.05 | 13.06 | 0.01 | 2.080 | 21.68 | 0.00 | 8.3 | 91.6 | 0.1 | -1.72 | 0.63 | 0.64 | 0.65 | — | 7960 | 1184 | 9 | 0 | 0 | 0 | 0 | logfile |
✔ | 7W6K | 32328 | 2023-08-09 | 2021-12-01 | 3.5 | 4.56 | 3.58 | 4.1 | 0.007 | 1.13 | 4.0 | 0.07 | 14.61 | 0.01 | 2.337 | 47.37 | 2.01 | 7.1 | 92.9 | 0.0 | -3.58 | 0.66 | 0.76 | 1.46 | 4.2 | 0.003 | 0.76 | 0.0 | 0.04 | 17.14 | 0.00 | 2.213 | 13.20 | 0.72 | 4.6 | 95.4 | 0.0 | 1.07 | 3.50 | 0.63 | 0.76 | 1.00 | 6468 | 820 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 6PoS | 20418 | 2023-08-09 | 2019-07-05 | 4.12 | 4.39 | — | 4.2 | 0.003 | 0.68 | 0.0 | 0.04 | 11.58 | 0.01 | 2.116 | 2.48 | 0.00 | 0.1 | 99.9 | 0.0 | -2.43 | 0.80 | 0.77 | — | 4.2 | 0.002 | 0.55 | 0.0 | 0.04 | 13.00 | 0.00 | 1.937 | 10.02 | 0.03 | 3.3 | 96.7 | 0.0 | -0.01 | 1.03 | 0.82 | 0.80 | — | 53503 | 3425 | 20 | 0 | 13 | 0 | 26853 | logfile |
✔ | 7E2G | 30956 | 2023-08-10 | 2021-02-05 | 3.61 | 3.75 | — | 3.7 | 0.005 | 0.72 | 0.0 | 0.06 | 13.60 | 0.00 | 2.132 | 13.35 | 0.14 | 9.8 | 90.2 | 0.0 | -2.91 | 0.62 | 0.82 | 1.67 | 3.7 | 0.003 | 0.69 | 0.0 | 0.04 | 15.39 | 0.00 | 2.228 | 8.65 | 0.82 | 8.1 | 91.9 | 0.0 | 0.19 | 0.41 | 0.62 | 0.81 | 1.69 | 7376 | 901 | 1 | 0 | 15 | 0 | 0 | logfile |
✔ | 5XTB | 6771 | 2023-08-19 | 2017-06-18 | 3.4 | 3.53 | — | 3.5 | 0.010 | 1.63 | 0.0 | 0.07 | 9.56 | 0.01 | 1.482 | 28.48 | 0.33 | 6.7 | 90.3 | 3.0 | -1.70 | 0.75 | 0.73 | 1.37 | 3.5 | 0.004 | 0.78 | 0.0 | 0.04 | 15.85 | 0.01 | 2.083 | 14.57 | 0.57 | 6.5 | 92.7 | 0.8 | -0.54 | 1.87 | 0.80 | 0.84 | 1.86 | 27962 | 3491 | 25 | 0 | 11 | 0 | 0 | logfile |
✔ | 7ToE | 26030 | 2023-08-13 | 2022-01-24 | 3.0 | 3.29 | — | 3.3 | 0.003 | 0.59 | 0.0 | 0.04 | 14.04 | 0.00 | 2.201 | 8.94 | 0.12 | 3.9 | 96.0 | 0.1 | -0.13 | 0.72 | 0.83 | 3.59 | 3.3 | 0.004 | 0.62 | 0.0 | 0.04 | 16.98 | 0.00 | 2.138 | 10.14 | 1.10 | 4.0 | 96.0 | 0.0 | -0.24 | 0.48 | 0.74 | 0.87 | 3.05 | 15100 | 1868 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 7F23 | 31426 | 2023-08-12 | 2021-06-10 | 3.58 | 3.82 | — | 3.8 | 0.010 | 1.01 | 0.0 | 0.06 | 15.07 | 0.01 | 2.087 | 17.66 | 0.57 | 4.4 | 95.6 | 0.0 | -2.63 | 0.66 | 0.80 | 1.60 | 3.8 | 0.003 | 0.71 | 0.0 | 0.04 | 17.00 | 0.00 | 2.138 | 12.70 | 0.91 | 3.2 | 96.8 | 0.0 | 0.34 | 0.63 | 0.64 | 0.77 | 1.45 | 8211 | 1037 | 7 | 0 | 2 | 0 | 0 | logfile |
✔ | 6o84 | 0650 | 2023-08-09 | 2019-03-08 | 3.92 | 4.04 | — | 4.0 | 0.005 | 0.84 | 0.0 | 0.05 | 14.01 | 0.00 | 2.350 | 2.97 | 0.64 | 4.9 | 95.1 | 0.0 | -5.68 | 0.60 | 0.82 | 2.21 | 4.0 | 0.004 | 0.78 | 0.0 | 0.04 | 16.35 | 0.00 | 2.131 | 8.82 | 0.16 | 7.3 | 92.7 | 0.0 | 1.35 | 1.28 | 0.61 | 0.82 | 2.66 | 6224 | 712 | 2 | 0 | 118 | 0 | 0 | logfile |
✔ | 6ZLG | 11265 | 2023-08-22 | 2020-06-30 | 3.0 | 3.18 | — | 3.1 | 0.003 | 0.44 | 0.0 | 0.03 | 16.50 | 0.00 | 2.180 | 7.56 | 4.15 | 0.1 | 99.9 | 0.0 | 1.26 | 0.80 | 0.87 | 2.98 | 3.1 | 0.003 | 0.40 | 0.0 | 0.03 | 17.92 | 0.00 | 2.131 | 6.27 | 3.28 | 1.6 | 98.4 | 0.0 | 5.28 | 1.17 | 0.82 | 0.90 | 2.58 | 33008 | 4072 | 24 | 0 | 0 | 0 | 0 | logfile |
✔ | 8D63 | 27215 | 2023-08-12 | 2022-06-06 | 3.14 | 3.26 | 3.09 | 3.2 | 0.009 | 0.99 | 0.0 | 0.06 | 15.75 | 0.01 | 2.290 | 9.81 | 0.36 | 5.0 | 94.7 | 0.3 | -1.01 | 0.65 | 0.81 | 4.38 | 3.2 | 0.005 | 0.55 | 0.0 | 0.05 | 15.24 | 0.00 | 2.138 | 5.24 | 0.07 | 3.9 | 96.1 | 0.0 | 0.68 | 0.32 | 0.67 | 0.84 | 4.18 | 12785 | 1535 | 10 | 0 | 5 | 0 | 0 | logfile |
✔ | 7E2D | 30955 | 2023-08-18 | 2021-02-05 | 3.71 | 3.99 | — | 3.8 | 0.007 | 1.44 | 3.0 | 0.08 | 14.42 | 0.01 | 1.563 | 7.01 | 0.69 | 10.0 | 89.1 | 0.9 | -4.65 | 0.81 | 0.70 | 1.33 | 3.7 | 0.005 | 0.83 | 0.0 | 0.05 | 16.03 | 0.00 | 2.138 | 17.49 | 0.54 | 13.2 | 86.5 | 0.2 | -2.36 | 0.75 | 0.82 | 0.75 | 1.29 | 23331 | 3291 | 11 | 0 | 0 | 0 | 0 | logfile |
✔ | 7PDG | 13337 | 2023-08-10 | 2021-08-05 | 4.3 | 4.51 | — | 3.1 | 0.005 | 0.82 | 0.0 | 0.05 | 14.59 | 0.00 | 2.161 | 16.17 | 0.00 | 5.2 | 94.8 | 0.0 | -0.49 | 0.58 | 0.72 | — | 3.1 | 0.003 | 0.73 | 0.0 | 0.04 | 14.74 | 0.00 | 2.173 | 12.63 | 0.00 | 4.3 | 95.7 | 0.0 | 0.21 | 0.88 | 0.58 | 0.72 | — | 7642 | 970 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 8D66 | 27218 | 2023-08-12 | 2022-06-06 | 3.14 | 3.25 | 3.04 | 3.2 | 0.009 | 1.02 | 0.0 | 0.06 | 16.96 | 0.01 | 2.309 | 7.77 | 0.00 | 6.2 | 93.8 | 0.0 | -1.63 | 0.69 | 0.83 | 3.44 | 3.2 | 0.004 | 0.57 | 0.0 | 0.05 | 15.52 | 0.00 | 2.214 | 7.58 | 0.36 | 5.2 | 94.8 | 0.0 | 0.02 | 0.37 | 0.66 | 0.83 | 3.50 | 12800 | 1540 | 10 | 0 | 5 | 0 | 0 | logfile |
✔ | 7XJL | 33231 | 2023-08-10 | 2022-04-18 | 3.5 | 3.88 | 3.61 | 3.8 | 0.002 | 0.61 | 0.0 | 0.04 | 13.57 | 0.00 | 2.168 | 10.62 | 0.00 | 2.4 | 97.6 | 0.0 | 0.78 | 0.63 | 0.77 | 1.72 | 3.8 | 0.003 | 0.71 | 0.0 | 0.04 | 15.86 | 0.00 | 2.122 | 16.26 | 0.58 | 3.0 | 97.0 | 0.0 | 0.94 | 0.47 | 0.62 | 0.77 | 1.62 | 8527 | 1137 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 5G06 | 3366 | 2023-08-19 | 2016-03-17 | 4.2 | 4.89 | — | 4.7 | 0.036 | 3.53 | 246.0 | 0.21 | 17.03 | 0.03 | 1.189 | 3.05 | 3.01 | 5.9 | 92.3 | 1.9 | -2.39 | 0.66 | 0.46 | — | 4.7 | 0.003 | 0.75 | 0.0 | 0.04 | 14.36 | 0.00 | 2.082 | 17.81 | 0.00 | 4.2 | 95.6 | 0.1 | -0.48 | 1.80 | 0.88 | 0.79 | — | 26794 | 3420 | 11 | 0 | 0 | 0 | 0 | logfile |
✔ | 7o17 | 12692 | 2023-08-12 | 2021-03-28 | 4.5 | 4.66 | — | 4.2 | 0.007 | 1.22 | 0.0 | 0.07 | 16.51 | 0.01 | 2.089 | 10.97 | 1.09 | 9.8 | 90.2 | 0.0 | -5.33 | 0.78 | 0.83 | — | 4.2 | 0.003 | 0.76 | 0.0 | 0.04 | 14.39 | 0.00 | 1.928 | 23.91 | 0.00 | 8.0 | 92.0 | 0.0 | -1.97 | 0.57 | 0.78 | 0.83 | — | 11679 | 1531 | 7 | 0 | 4 | 0 | 0 | logfile |
✘ | 8EFB | 28077 | 2023-08-11 | 2022-09-08 | 3.2 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 8947 | 1136 | 6 | 0 | 1 | 0 | 0 | logfile |