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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7RNN | 24580 | 2023-07-03 | 2021-07-29 | 2.86 | 2.05 | — | 3.2 | 0.008 | 0.80 | 0.0 | 0.14 | 13.56 | 0.00 | 1.929 | 6.74 | 0.55 | 3.4 | 96.6 | 0.0 | -1.11 | 0.50 | 0.76 | 5.00 | 3.2 | 0.004 | 0.64 | 0.0 | 0.04 | 15.50 | 0.00 | 2.212 | 6.34 | 1.09 | 1.9 | 98.1 | 0.0 | 0.60 | 0.97 | 0.49 | 0.87 | 4.03 | 4000 | 540 | 2 | 0 | 2 | 0 | 0 | logfile |
✔ | 7oTV | 13067 | 2023-07-13 | 2021-06-10 | 3.24 | 3.53 | — | 3.4 | 0.012 | 0.79 | 0.0 | 0.10 | 14.43 | 0.01 | 2.090 | 10.98 | 0.34 | 8.5 | 91.4 | 0.1 | -1.18 | 0.71 | 0.65 | 0.82 | 3.4 | 0.003 | 0.73 | 0.0 | 0.04 | 16.62 | 0.00 | 2.121 | 10.10 | 0.31 | 6.1 | 93.9 | 0.0 | -0.41 | 0.90 | 0.77 | 0.77 | 0.92 | 29041 | 3636 | 1 | 0 | 21 | 0 | 0 | logfile |
✔ | 7SFW | 25104 | 2023-07-17 | 2021-10-04 | 3.2 | 3.27 | 3.18 | 3.3 | 0.004 | 0.62 | 0.0 | 0.05 | 14.02 | 0.01 | 2.133 | 10.14 | 0.05 | 4.4 | 95.6 | 0.0 | -0.35 | 0.68 | 0.85 | 3.24 | 3.3 | 0.003 | 0.62 | 0.0 | 0.04 | 15.81 | 0.00 | 2.055 | 11.02 | 0.26 | 4.6 | 95.4 | 0.0 | -0.47 | 1.50 | 0.66 | 0.86 | 2.93 | 38620 | 4984 | 28 | 0 | 12 | 0 | 0 | logfile |
✘ | 7Z5J | 14522 | 2023-07-20 | 2022-03-09 | 2.58 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 25576 | 3234 | 24 | 0 | 54 | 0 | 0 | logfile |
✔ | 7MoA | 23922 | 2023-07-06 | 2021-05-01 | 4.9 | 4.75 | — | 4.0 | 0.011 | 1.37 | 0.0 | 0.08 | 18.23 | 0.01 | 1.983 | 27.58 | 10.24 | 8.6 | 91.0 | 0.5 | -1.69 | 0.83 | 0.76 | — | 3.9 | 0.003 | 0.72 | 0.0 | 0.05 | 13.33 | 0.00 | 2.133 | 15.77 | 0.00 | 4.8 | 95.2 | 0.1 | -1.11 | 0.92 | 0.84 | 0.78 | — | 12511 | 1580 | 5 | 0 | 12 | 0 | 0 | logfile |
✔ | 8CSX | 26974 | 2023-07-05 | 2022-05-13 | 2.4 | 2.08 | 2.44 | 2.1 | 0.006 | 0.79 | 1.0 | 0.05 | 13.62 | 0.01 | 2.208 | 4.92 | 3.86 | 1.7 | 98.2 | 0.1 | 1.76 | 0.69 | 0.88 | 5.16 | 2.1 | 0.005 | 0.66 | 0.0 | 0.04 | 15.77 | 0.01 | 2.040 | 6.47 | 2.04 | 1.8 | 98.2 | 0.0 | 1.86 | 0.36 | 0.69 | 0.88 | 4.84 | 9116 | 1158 | 8 | 0 | 4 | 150 | 0 | logfile |
✔ | 7TJ5 | 25916 | 2023-07-06 | 2022-01-14 | 2.41 | 3.25 | 2.42 | 2.9 | 0.006 | 1.92 | 0.0 | 0.05 | 19.56 | 0.01 | 2.285 | 5.53 | 0.22 | 5.4 | 94.6 | 0.0 | 0.48 | 0.69 | 0.72 | 2.97 | 2.9 | 0.004 | 0.72 | 0.0 | 0.04 | 17.16 | 0.00 | 2.319 | 8.30 | 1.34 | 3.9 | 96.1 | 0.0 | 1.98 | 1.48 | 0.73 | 0.85 | 2.51 | 13152 | 1568 | 8 | 0 | 32 | 0 | 0 | logfile |
✔ | 6XEU | 22150 | 2023-07-05 | 2020-06-13 | 3.2 | 3.84 | — | 3.7 | 0.008 | 0.82 | 4.0 | 0.06 | 15.47 | 0.01 | 2.387 | 2.63 | 2.83 | 11.3 | 88.7 | 0.0 | -2.88 | 0.76 | 0.88 | 3.94 | 3.7 | 0.002 | 0.60 | 0.0 | 0.04 | 15.63 | 0.00 | 2.305 | 3.40 | 0.09 | 4.3 | 95.7 | 0.0 | 0.15 | 0.37 | 0.77 | 0.89 | 3.06 | 10544 | 1312 | 8 | 0 | 16 | 0 | 0 | logfile |
✔ | 7APX | 11859 | 2023-07-10 | 2020-10-20 | 3.4 | 4.19 | — | 4.0 | 0.006 | 0.76 | 0.0 | 0.05 | 16.32 | 0.00 | 2.090 | 9.36 | 9.74 | 6.3 | 93.6 | 0.1 | -2.30 | 0.83 | 0.83 | 1.26 | 4.0 | 0.003 | 0.62 | 0.0 | 0.04 | 15.85 | 0.00 | 2.171 | 7.03 | 0.22 | 5.2 | 94.8 | 0.0 | 1.33 | 0.46 | 0.81 | 0.80 | 1.12 | 20552 | 2870 | 6 | 0 | 19 | 0 | 0 | logfile |
✔ | 6YRF | 10888 | 2023-07-11 | 2020-04-20 | 3.9 | 4.58 | — | 4.2 | 0.006 | 0.78 | 0.0 | 0.05 | 14.50 | 0.00 | 2.028 | 27.54 | 0.21 | 12.8 | 87.1 | 0.1 | -3.65 | 0.91 | 0.84 | 1.12 | 4.2 | 0.003 | 0.71 | 0.0 | 0.04 | 15.77 | 0.00 | 2.084 | 16.66 | 0.43 | 10.1 | 89.9 | 0.0 | -0.77 | 0.56 | 0.91 | 0.82 | 0.90 | 24828 | 3108 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 7oTM | 13062 | 2023-07-13 | 2021-06-10 | 3.33 | 3.97 | — | 3.7 | 0.008 | 0.93 | 1.0 | 0.05 | 14.51 | 0.01 | 2.071 | 16.56 | 0.28 | 9.2 | 90.6 | 0.2 | -1.79 | 0.82 | 0.77 | 1.32 | 3.7 | 0.003 | 0.70 | 0.0 | 0.04 | 15.94 | 0.00 | 2.146 | 11.32 | 0.16 | 6.4 | 93.6 | 0.0 | -0.53 | 1.41 | 0.84 | 0.80 | 0.80 | 29040 | 3636 | 1 | 0 | 21 | 0 | 0 | logfile |
✔ | 8FHN | 29096 | 2023-07-07 | 2022-12-14 | 3.0 | 3.42 | 3.14 | 3.4 | 0.009 | 0.99 | 1.0 | 0.06 | 14.56 | 0.01 | 2.199 | 6.72 | 2.21 | 4.7 | 95.3 | 0.0 | -1.79 | 0.69 | 0.88 | 3.88 | 3.4 | 0.003 | 0.54 | 0.0 | 0.04 | 16.06 | 0.00 | 2.189 | 5.23 | 2.07 | 2.5 | 97.4 | 0.1 | 0.29 | 0.40 | 0.66 | 0.88 | 3.04 | 13613 | 1722 | 5 | 0 | 4 | 0 | 0 | logfile |
✔ | 7F02 | 31394 | 2023-07-04 | 2021-06-03 | 3.24 | 3.61 | — | 3.5 | 0.004 | 0.69 | 0.0 | 0.04 | 14.12 | 0.00 | 1.895 | 8.78 | 0.00 | 8.7 | 91.1 | 0.2 | -1.36 | 0.69 | 0.81 | 2.02 | 3.5 | 0.003 | 0.69 | 0.0 | 0.04 | 15.99 | 0.00 | 1.940 | 9.00 | 0.33 | 8.1 | 91.9 | 0.0 | -0.43 | 0.93 | 0.65 | 0.83 | 2.07 | 8835 | 1130 | 9 | 0 | 5 | 0 | 0 | logfile |
✔ | 7EPB | 31236 | 2023-07-07 | 2021-04-26 | 3.1 | 3.55 | — | 3.4 | 0.004 | 0.62 | 0.0 | 0.06 | 13.65 | 0.00 | 2.292 | 8.87 | 0.08 | 4.5 | 95.5 | 0.0 | -1.65 | 0.63 | 0.74 | 1.33 | 3.3 | 0.003 | 0.65 | 0.0 | 0.04 | 15.24 | 0.00 | 2.227 | 13.98 | 0.24 | 6.0 | 94.0 | 0.0 | -0.51 | 0.54 | 0.66 | 0.81 | 1.43 | 13104 | 1794 | 6 | 0 | 2 | 0 | 0 | logfile |
✔ | 7LKH | 23408 | 2023-07-03 | 2021-02-02 | 3.5 | 3.06 | — | 3.6 | 0.006 | 0.94 | 0.0 | 0.05 | 13.23 | 0.01 | 1.903 | 8.34 | 0.22 | 5.5 | 94.5 | 0.0 | -0.99 | 0.64 | 0.78 | 3.39 | 3.5 | 0.004 | 0.73 | 0.0 | 0.05 | 15.48 | 0.00 | 2.177 | 6.77 | 0.65 | 5.9 | 94.1 | 0.0 | -0.34 | 0.47 | 0.66 | 0.80 | 3.21 | 4179 | 516 | 4 | 0 | 2 | 0 | 0 | logfile |
✔ | 7VC0 | 31887 | 2023-07-18 | 2021-09-01 | 2.6 | 2.60 | — | 2.6 | 0.008 | 0.88 | 0.0 | 0.04 | 16.03 | 0.01 | 2.024 | 8.05 | 0.05 | 3.3 | 96.6 | 0.1 | 1.52 | 0.74 | 0.89 | 4.68 | 2.6 | 0.003 | 0.55 | 0.0 | 0.04 | 16.80 | 0.00 | 2.095 | 6.18 | 0.85 | 3.0 | 97.0 | 0.1 | 1.98 | 0.32 | 0.75 | 0.91 | 4.33 | 40048 | 4727 | 69 | 0 | 26 | 424 | 0 | logfile |
✔ | 7QNB | 14073 | 2023-07-07 | 2021-12-20 | 3.1 | 3.62 | — | 3.3 | 0.003 | 0.46 | 0.0 | 0.04 | 9.36 | 0.00 | 2.241 | 5.47 | 0.56 | 1.7 | 98.3 | 0.0 | 1.87 | 0.75 | 0.84 | 3.27 | 3.3 | 0.007 | 0.72 | 0.0 | 0.05 | 12.99 | 0.00 | 2.102 | 9.27 | 0.25 | 3.2 | 96.8 | 0.0 | 0.88 | 2.30 | 0.78 | 0.90 | 3.87 | 14793 | 1767 | 15 | 0 | 24 | 0 | 0 | logfile |
✔ | 7FD5 | 31535 | 2023-07-17 | 2021-07-16 | 2.4 | 3.12 | — | 2.9 | 0.015 | 1.23 | 4.0 | 0.07 | 11.36 | 0.01 | 2.203 | 5.63 | 0.51 | 6.3 | 93.5 | 0.2 | -3.77 | 0.71 | 0.72 | 3.86 | 2.9 | 0.003 | 0.63 | 0.0 | 0.04 | 13.74 | 0.00 | 2.150 | 7.02 | 1.35 | 4.7 | 95.3 | 0.0 | 0.18 | 1.00 | 0.75 | 0.86 | 2.78 | 37179 | 4674 | 13 | 0 | 34 | 0 | 0 | logfile |
✔ | 7VF2 | 31946 | 2023-07-07 | 2021-09-10 | 3.0 | 3.55 | — | 3.4 | 0.004 | 0.73 | 0.0 | 0.04 | 15.88 | 0.00 | 2.095 | 9.72 | 0.26 | 3.7 | 96.3 | 0.0 | -2.72 | 0.77 | 0.84 | 1.85 | 3.4 | 0.004 | 0.70 | 0.0 | 0.04 | 17.97 | 0.00 | 2.170 | 10.49 | 1.42 | 3.2 | 96.8 | 0.0 | 1.29 | 0.60 | 0.75 | 0.85 | 1.31 | 13565 | 1716 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 7QN5 | 14067 | 2023-07-08 | 2021-12-20 | 2.5 | 2.72 | — | 2.6 | 0.003 | 0.60 | 0.0 | 0.05 | 12.09 | 0.01 | 2.290 | 4.02 | 0.36 | 1.6 | 98.4 | 0.0 | 1.02 | 0.75 | 0.88 | 4.90 | 2.6 | 0.004 | 0.86 | 0.0 | 0.05 | 15.36 | 0.00 | 1.982 | 8.29 | 1.13 | 1.4 | 98.6 | 0.0 | 1.66 | 2.10 | 0.78 | 0.92 | 4.89 | 16048 | 1881 | 25 | 0 | 39 | 174 | 0 | logfile |