The table shows a selection of parameters. Activate more columns using
the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 7VVN | 32145 | 2024-03-11 | 2021-11-06 | 3.8 | 3.28 | 3.77 | 3.7 | 0.013 | 1.78 | 0.0 | 0.08 | 15.14 | 0.01 | 2.185 | 9.66 | 0.37 | 6.1 | 93.8 | 0.1 | -2.22 | 0.66 | 0.73 | 1.76 | 3.4 | 0.004 | 0.68 | 0.0 | 0.04 | 16.27 | 0.00 | 2.088 | 11.12 | 4.00 | 4.1 | 95.9 | 0.0 | -0.22 | 1.69 | 0.69 | 0.72 | 1.51 | 8130 | 1086 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 6NiY | 9382 | 2024-03-11 | 2019-01-02 | 3.34 | 3.62 | 3.34 | 3.7 | 0.008 | 0.99 | 1.0 | 0.06 | 13.74 | 0.01 | 2.287 | 5.13 | 0.12 | 2.6 | 97.4 | 0.0 | -0.93 | 0.70 | 0.76 | 2.70 | 3.7 | 0.004 | 0.98 | 1.0 | 0.04 | 16.60 | 0.00 | 2.020 | 12.34 | 3.92 | 2.9 | 97.1 | 0.0 | 0.38 | 1.25 | 0.73 | 0.80 | 1.89 | 7727 | 965 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 7MQH | 23947 | 2024-03-19 | 2021-05-05 | 3.1 | 3.00 | 3.04 | 3.2 | 0.007 | 0.81 | 0.0 | 0.06 | 13.71 | 0.00 | 2.350 | 2.29 | 0.00 | 1.0 | 99.0 | 0.0 | 0.95 | 0.79 | 0.86 | 5.69 | 3.2 | 0.002 | 0.46 | 0.0 | 0.04 | 14.65 | 0.00 | 2.330 | 3.50 | 0.74 | 2.8 | 97.2 | 0.0 | 0.97 | 0.34 | 0.81 | 0.88 | 5.93 | 12736 | 1640 | 16 | 16 | 0 | 0 | 0 | logfile |
✔ | 7K8C | 22726 | 2024-03-15 | 2020-09-26 | 4.27 | 4.22 | — | 4.2 | 0.004 | 0.84 | 2.0 | 0.05 | 13.70 | 0.01 | 2.196 | 12.83 | 0.85 | 3.2 | 96.8 | 0.0 | 0.14 | 0.47 | 0.56 | — | 4.2 | 0.003 | 0.80 | 0.0 | 0.04 | 13.36 | 0.01 | 2.193 | 13.37 | 0.17 | 4.5 | 95.5 | 0.0 | 0.49 | 0.64 | 0.50 | 0.61 | — | 5524 | 723 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 7VVL | 32143 | 2024-03-11 | 2021-11-06 | 2.8 | 2.24 | 2.76 | 2.9 | 0.014 | 1.69 | 0.0 | 0.09 | 17.70 | 0.00 | 2.204 | 4.33 | 7.24 | 4.3 | 95.7 | 0.1 | -0.88 | 0.59 | 0.76 | 3.21 | 3.0 | 0.003 | 0.55 | 0.0 | 0.04 | 18.01 | 0.00 | 2.180 | 5.62 | 4.01 | 3.5 | 96.5 | 0.0 | 0.90 | 0.45 | 0.63 | 0.78 | 2.35 | 8725 | 1126 | 6 | 0 | 0 | 1 | 0 | logfile |
✔ | 6KUT | 9580 | 2024-03-16 | 2019-09-02 | 4.1 | 4.14 | — | 4.1 | 0.003 | 0.81 | 0.0 | 0.05 | 11.95 | 0.01 | 2.191 | 6.37 | 0.68 | 7.6 | 92.3 | 0.1 | -5.00 | 0.73 | 0.75 | — | 4.1 | 0.003 | 0.69 | 0.0 | 0.04 | 14.64 | 0.00 | 2.097 | 10.92 | 0.00 | 7.2 | 92.7 | 0.1 | -1.07 | 0.94 | 0.73 | 0.78 | — | 14111 | 1679 | 5 | 27 | 0 | 0 | 0 | logfile |
✔ | 5XLo | 6729 | 2024-03-16 | 2017-05-11 | 3.8 | 3.91 | — | 3.9 | 0.009 | 1.37 | 0.0 | 0.06 | 15.31 | 0.01 | 2.050 | 13.55 | 0.29 | 17.3 | 81.9 | 0.8 | -6.02 | 0.58 | 0.64 | 0.55 | 3.9 | 0.003 | 0.88 | 0.0 | 0.04 | 18.43 | 0.01 | 2.050 | 20.71 | 3.46 | 15.9 | 83.7 | 0.4 | -4.02 | 1.62 | 0.60 | 0.66 | 0.51 | 15413 | 2073 | 9 | 38 | 0 | 0 | 0 | logfile |
✔ | 7RP5 | 24612 | 2024-03-11 | 2021-08-03 | 3.72 | 3.93 | — | 3.9 | 0.005 | 1.01 | 0.0 | 0.05 | 14.74 | 0.01 | 2.346 | 4.77 | 0.46 | 5.7 | 94.3 | 0.0 | -4.74 | 0.68 | 0.81 | 1.10 | 3.9 | 0.003 | 0.70 | 0.0 | 0.04 | 16.25 | 0.00 | 2.183 | 11.10 | 3.49 | 5.0 | 95.0 | 0.0 | 0.47 | 1.54 | 0.69 | 0.81 | 1.09 | 6578 | 883 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 7N9W | 24263 | 2024-03-11 | 2021-06-18 | 4.16 | 4.20 | — | 4.2 | 0.005 | 1.08 | 0.0 | 0.06 | 14.64 | 0.01 | 2.258 | 5.10 | 1.40 | 6.7 | 93.2 | 0.1 | -5.14 | 0.63 | 0.77 | — | 4.1 | 0.003 | 0.74 | 0.0 | 0.04 | 14.21 | 0.00 | 2.179 | 12.54 | 0.00 | 6.2 | 93.8 | 0.0 | -1.12 | 0.59 | 0.65 | 0.78 | — | 6561 | 890 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 7MQi | 23948 | 2024-03-19 | 2021-05-05 | 3.21 | 3.01 | 3.19 | 3.2 | 0.006 | 0.79 | 0.0 | 0.05 | 13.51 | 0.00 | 2.202 | 2.71 | 0.59 | 1.4 | 98.6 | 0.0 | 0.80 | 0.67 | 0.81 | 4.51 | 3.1 | 0.003 | 0.47 | 0.0 | 0.04 | 15.20 | 0.00 | 2.285 | 3.19 | 1.35 | 2.6 | 97.4 | 0.0 | 1.40 | 1.79 | 0.74 | 0.86 | 4.35 | 12696 | 1640 | 16 | 16 | 0 | 0 | 0 | logfile |
✔ | 6HCG | 0193 | 2024-03-18 | 2018-08-15 | 4.3 | 3.90 | 4.21 | 3.9 | 0.011 | 1.31 | 0.0 | 0.07 | 10.57 | 0.01 | 1.943 | 35.63 | 0.00 | 9.9 | 90.1 | 0.0 | -4.43 | 0.82 | 0.73 | — | 3.7 | 0.003 | 0.72 | 0.0 | 0.05 | 12.63 | 0.00 | 2.038 | 16.18 | 0.01 | 7.8 | 92.2 | 0.0 | -1.86 | 2.12 | 0.84 | 0.76 | — | 85185 | 11295 | 45 | 0 | 0 | 0 | 0 | logfile |
✔ | 7R9M | 24329 | 2024-03-11 | 2021-06-29 | 4.0 | 4.58 | — | 3.9 | 0.002 | 0.38 | 0.0 | 0.04 | 4.68 | 0.00 | 2.214 | 3.88 | 0.00 | 8.3 | 90.9 | 0.8 | -4.83 | 0.85 | 0.77 | — | 3.9 | 0.002 | 0.54 | 0.0 | 0.04 | 9.11 | 0.00 | 2.104 | 8.80 | 0.49 | 3.2 | 96.8 | 0.0 | -0.14 | 1.72 | 0.86 | 0.78 | — | 7727 | 505 | 1 | 0 | 0 | 0 | 3939 | logfile |
✔ | 7RQ7 | 24629 | 2024-03-11 | 2021-08-05 | 3.95 | 4.02 | — | 4.0 | 0.005 | 0.95 | 0.0 | 0.05 | 14.60 | 0.01 | 2.353 | 6.68 | 0.31 | 5.8 | 94.2 | 0.0 | -5.29 | 0.66 | 0.80 | 1.53 | 3.9 | 0.003 | 0.81 | 0.0 | 0.04 | 16.72 | 0.00 | 2.200 | 14.60 | 3.14 | 5.5 | 94.5 | 0.0 | -0.26 | 1.19 | 0.67 | 0.80 | 1.11 | 6380 | 861 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 5XLP | 6731 | 2024-03-14 | 2017-05-11 | 4.2 | 4.23 | — | 4.2 | 0.009 | 1.36 | 0.0 | 0.06 | 16.05 | 0.01 | 2.194 | 12.48 | 0.57 | 18.2 | 81.4 | 0.5 | -5.53 | 0.62 | 0.58 | — | 4.2 | 0.004 | 0.93 | 0.0 | 0.04 | 17.17 | 0.01 | 2.092 | 19.09 | 0.11 | 15.6 | 84.1 | 0.3 | -4.04 | 2.39 | 0.65 | 0.64 | — | 9952 | 1343 | 6 | 24 | 0 | 0 | 0 | logfile |
✔ | 7R9U | 24331 | 2024-03-11 | 2021-06-29 | 4.4 | 5.41 | — | 4.3 | 0.002 | 0.34 | 0.0 | 0.04 | 4.36 | 0.00 | 2.248 | 3.50 | 0.00 | 9.1 | 90.3 | 0.6 | -4.49 | 0.78 | 0.62 | — | 4.3 | 0.003 | 0.52 | 0.0 | 0.04 | 8.28 | 0.00 | 1.920 | 9.32 | 0.00 | 3.4 | 96.6 | 0.0 | 0.39 | 2.36 | 0.91 | 0.84 | — | 7727 | 505 | 1 | 0 | 0 | 0 | 3939 | logfile |
✔ | 3KTT | 5148 | 2024-03-10 | 2009-11-25 | 4.0 | 2.33 | — | 4.5 | 0.020 | 2.86 | 20.0 | 0.20 | 15.20 | 0.01 | 1.652 | 179.94 | 7.82 | 6.3 | 89.4 | 4.3 | -0.59 | 0.27 | 0.28 | — | 2.1 | 0.005 | 1.19 | 0.0 | 0.06 | 17.22 | 0.01 | 2.007 | 33.74 | 4.89 | 10.6 | 88.3 | 1.2 | -2.44 | 1.71 | 0.31 | 0.42 | — | 3855 | 513 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 7SJN | 25162 | 2024-03-17 | 2021-10-18 | 3.4 | 3.82 | 3.28 | 3.8 | 0.004 | 0.65 | 3.0 | 0.05 | 12.76 | 0.00 | 2.246 | 8.28 | 0.00 | 3.2 | 96.8 | 0.0 | -0.44 | 0.71 | 0.73 | 1.67 | 3.8 | 0.003 | 0.56 | 0.0 | 0.05 | 14.59 | 0.00 | 2.094 | 7.70 | 1.23 | 6.2 | 93.8 | 0.0 | -0.50 | 2.54 | 0.73 | 0.77 | 2.14 | 19062 | 1251 | 9 | 0 | 0 | 0 | 9483 | logfile |
✔ | 5N9Y | 3605 | 2024-03-15 | 2017-02-27 | 4.2 | 4.37 | — | 4.2 | 0.008 | 1.29 | 0.0 | 0.07 | 12.87 | 0.01 | 2.233 | 12.59 | 2.02 | 8.3 | 91.7 | 0.0 | -5.18 | 0.79 | 0.82 | — | 4.2 | 0.004 | 0.92 | 0.0 | 0.05 | 13.08 | 0.01 | 2.162 | 21.48 | 0.00 | 5.5 | 94.5 | 0.0 | -1.49 | 1.64 | 0.79 | 0.81 | — | 12835 | 1635 | 5 | 0 | 0 | 0 | 0 | logfile |
✔ | 5XB1 | 6714 | 2024-03-21 | 2017-03-15 | 3.0 | 3.16 | 2.84 | 3.1 | 0.007 | 0.71 | 0.0 | 0.05 | 10.82 | 0.00 | 2.173 | 4.34 | 0.00 | 2.0 | 98.0 | 0.0 | -6.31 | 0.80 | 0.88 | 4.19 | 3.1 | 0.003 | 0.56 | 0.0 | 0.04 | 17.96 | 0.00 | 2.173 | 2.70 | 1.79 | 2.2 | 97.8 | 0.0 | 3.51 | 0.67 | 0.79 | 0.86 | 2.73 | 30847 | 3720 | 48 | 0 | 0 | 55 | 0 | logfile |
✔ | 6WTZ | 21900 | 2024-03-11 | 2020-05-04 | 3.15 | 3.04 | — | 3.1 | 0.004 | 0.84 | 0.0 | 0.05 | 15.73 | 0.00 | 2.301 | 2.97 | 5.70 | 6.5 | 93.5 | 0.0 | -2.14 | 0.54 | 0.72 | 4.27 | 3.0 | 0.005 | 0.71 | 0.0 | 0.05 | 16.88 | 0.00 | 2.134 | 11.93 | 6.59 | 7.1 | 92.9 | 0.0 | -1.26 | 1.18 | 0.65 | 0.79 | 3.45 | 7917 | 1020 | 6 | 0 | 0 | 36 | 0 | logfile |