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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 6M0S | 30035 | 2022-04-09 | 2020-02-22 | 3.6 | 3.77 | — | 3.7 | 0.004 | 0.65 | 0.0 | 0.04 | 8.18 | 0.00 | 2.205 | 1.30 | 0.00 | 1.9 | 98.1 | 0.0 | -4.94 | 0.71 | 0.74 | 1.42 | 3.7 | 0.003 | 0.58 | 0.0 | 0.04 | 14.51 | 0.00 | 2.044 | 5.06 | 0.17 | 1.9 | 98.1 | 0.0 | -0.07 | 1.34 | 0.75 | 0.80 | 1.57 | 44660 | 2909 | 15 | 0 | 0 | 0 | 22618 | logfile |
✔ | 7BWM | 30233 | 2022-04-06 | 2020-04-15 | 2.9 | 2.97 | — | 2.9 | 0.005 | 0.78 | 0.0 | 0.05 | 14.21 | 0.00 | 2.048 | 7.26 | 7.21 | 5.8 | 94.0 | 0.3 | -3.28 | 0.76 | 0.85 | 4.49 | 2.9 | 0.002 | 0.61 | 0.0 | 0.04 | 15.57 | 0.00 | 2.132 | 6.57 | 2.05 | 4.9 | 95.1 | 0.0 | -0.79 | 1.13 | 0.77 | 0.85 | 3.39 | 9532 | 1219 | 1 | 0 | 0 | 0 | 0 | logfile |
✘ | 6ZY2 | 11547 | 2022-04-05 | 2020-07-30 | 3.6 | 3.75 | — | 3.7 | 0.003 | 0.66 | 0.0 | 0.04 | 11.67 | 0.00 | 2.308 | 2.92 | 0.18 | 3.9 | 96.1 | 0.0 | -5.61 | 0.67 | 0.75 | 1.15 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 15718 | 2091 | 12 | 0 | 0 | 0 | 0 | logfile |
✔ | 7DR6 | 30824 | 2022-04-05 | 2020-12-26 | 4.1 | 4.22 | — | 4.2 | 0.002 | 0.55 | 0.0 | 0.04 | 7.81 | 0.00 | 2.196 | 10.04 | 0.12 | 4.9 | 94.9 | 0.1 | -2.74 | 0.68 | 0.63 | — | 4.2 | 0.005 | 0.84 | 0.0 | 0.05 | 13.63 | 0.01 | 2.047 | 17.87 | 0.08 | 4.4 | 95.5 | 0.1 | -0.40 | 1.86 | 0.74 | 0.74 | — | 59957 | 7661 | 35 | 0 | 0 | 0 | 0 | logfile |
✔ | 7DD3 | 30643 | 2022-04-04 | 2020-10-27 | 3.2 | 3.57 | — | 3.6 | 0.012 | 1.06 | 1.0 | 0.06 | 11.80 | 0.01 | 2.357 | 4.43 | 2.31 | 5.3 | 94.5 | 0.1 | -3.77 | 0.65 | 0.82 | 3.21 | 3.6 | 0.003 | 0.64 | 0.0 | 0.04 | 14.81 | 0.00 | 2.205 | 8.03 | 0.46 | 4.5 | 95.4 | 0.1 | 0.10 | 0.68 | 0.61 | 0.81 | 1.98 | 5929 | 726 | 3 | 9 | 0 | 0 | 0 | logfile |
✔ | 6ZRR | 11383 | 2022-04-04 | 2020-07-14 | 4.0 | 4.04 | 3.78 | 4.3 | 0.015 | 1.20 | 0.0 | 0.06 | 13.24 | 0.00 | 2.189 | 28.46 | 0.00 | 5.0 | 95.0 | 0.0 | -4.56 | 0.62 | 0.69 | — | 4.3 | 0.005 | 0.78 | 0.0 | 0.05 | 14.68 | 0.00 | 2.060 | 37.04 | 0.62 | 26.9 | 73.1 | 0.0 | -5.23 | 1.54 | 0.65 | 0.76 | — | 5724 | 414 | 18 | 0 | 0 | 0 | 2664 | logfile |
✔ | 6LBA | 0868 | 2022-04-05 | 2019-11-13 | 4.1 | 4.19 | — | 4.1 | 0.005 | 1.04 | 8.0 | 0.06 | 14.23 | 0.01 | 1.605 | 70.19 | 3.56 | 10.9 | 88.6 | 0.5 | -2.46 | 0.76 | 0.78 | — | 4.1 | 0.003 | 0.77 | 0.0 | 0.04 | 14.49 | 0.00 | 2.099 | 15.54 | 0.00 | 7.8 | 92.2 | 0.0 | 0.16 | 1.67 | 0.77 | 0.79 | — | 14992 | 1864 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 7BX7 | 30235 | 2022-04-04 | 2020-04-17 | 2.8 | 2.94 | — | 2.9 | 0.009 | 0.84 | 0.0 | 0.04 | 12.96 | 0.00 | 2.228 | 15.34 | 0.00 | 9.3 | 90.7 | 0.0 | -5.83 | 0.40 | 0.79 | 6.36 | 2.9 | 0.004 | 0.60 | 0.0 | 0.04 | 13.78 | 0.00 | 2.166 | 11.86 | 1.72 | 8.5 | 91.5 | 0.0 | -5.45 | 1.13 | 0.41 | 0.79 | 6.15 | 1896 | 270 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 6WYJ | 21966 | 2022-04-04 | 2020-05-13 | 3.7 | 3.74 | — | 3.8 | 0.010 | 0.64 | 0.0 | 0.05 | 12.33 | 0.00 | 2.268 | 5.08 | 0.00 | 5.3 | 94.7 | 0.0 | -4.80 | 0.59 | 0.78 | 4.37 | 3.8 | 0.004 | 0.61 | 0.0 | 0.04 | 14.39 | 0.00 | 2.257 | 5.25 | 0.96 | 1.5 | 98.5 | 0.0 | 1.66 | 0.59 | 0.64 | 0.80 | 1.50 | 2949 | 398 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 7K7K | 22701 | 2022-04-08 | 2020-09-23 | 3.56 | 3.71 | — | 3.7 | 0.009 | 0.92 | 0.0 | 0.05 | 15.87 | 0.01 | 1.827 | 16.18 | 1.39 | 7.7 | 92.3 | 0.0 | -6.33 | 0.54 | 0.86 | 1.36 | 3.7 | 0.003 | 0.78 | 0.0 | 0.04 | 18.95 | 0.00 | 2.125 | 10.78 | 0.94 | 6.7 | 93.3 | 0.0 | 0.98 | 2.60 | 0.53 | 0.84 | 1.15 | 36204 | 4788 | 28 | 0 | 0 | 0 | 0 | logfile |
✔ | 7CRW | 30458 | 2022-04-05 | 2020-08-14 | 3.18 | 3.39 | — | 3.2 | 0.005 | 0.73 | 1.0 | 0.05 | 13.49 | 0.00 | 2.202 | 9.30 | 0.60 | 5.9 | 93.9 | 0.1 | -3.70 | 0.89 | 0.85 | 3.20 | 3.2 | 0.004 | 0.64 | 0.0 | 0.04 | 15.10 | 0.01 | 2.147 | 8.17 | 0.38 | 5.7 | 94.2 | 0.0 | -0.99 | 0.47 | 0.89 | 0.86 | 3.12 | 16613 | 2057 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 6XE9 | 22145 | 2022-04-06 | 2020-06-12 | 4.3 | 5.05 | 4.38 | 4.4 | 0.003 | 0.50 | 0.0 | 0.04 | 14.92 | 0.00 | 2.096 | 21.22 | 0.77 | 5.4 | 94.6 | 0.0 | -1.78 | 0.92 | 0.82 | — | 4.4 | 0.005 | 0.67 | 0.0 | 0.04 | 14.61 | 0.00 | 2.020 | 29.35 | 0.10 | 6.6 | 93.4 | 0.0 | 0.49 | 1.45 | 0.92 | 0.83 | — | 22081 | 2949 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 7DK4 | 30702 | 2022-04-08 | 2020-11-23 | 3.8 | 3.20 | — | 3.4 | 0.003 | 0.55 | 0.0 | 0.04 | 7.92 | 0.00 | 2.106 | 1.30 | 0.15 | 2.8 | 97.2 | 0.0 | -3.26 | 0.58 | 0.47 | 1.13 | 3.1 | 0.013 | 1.19 | 4.0 | 0.05 | 14.80 | 0.01 | 1.951 | 20.94 | 0.38 | 6.7 | 93.3 | 0.0 | -1.86 | 1.45 | 0.72 | 0.66 | 1.23 | 34707 | 4470 | 9 | 0 | 0 | 0 | 0 | logfile |
✔ | 7DMQ | 30767 | 2022-04-04 | 2020-12-05 | 3.06 | 3.15 | — | 3.1 | 0.005 | 0.96 | 0.0 | 0.05 | 13.95 | 0.01 | 2.238 | 3.76 | 0.62 | 9.8 | 90.2 | 0.0 | -5.19 | 0.70 | 0.73 | 2.74 | 3.1 | 0.004 | 0.68 | 0.0 | 0.04 | 16.28 | 0.00 | 2.110 | 9.93 | 0.62 | 10.8 | 89.2 | 0.0 | -1.82 | 1.43 | 0.75 | 0.76 | 1.90 | 9444 | 937 | 3 | 88 | 0 | 0 | 0 | logfile |
✔ | 7JZZ | 22585 | 2022-04-07 | 2020-09-02 | 3.2 | 3.30 | — | 3.3 | 0.010 | 0.98 | 0.0 | 0.05 | 16.10 | 0.01 | 2.209 | 6.01 | 0.61 | 7.1 | 92.9 | 0.0 | -3.65 | 0.81 | 0.86 | 3.19 | 3.3 | 0.006 | 0.80 | 0.0 | 0.04 | 17.07 | 0.00 | 2.064 | 12.02 | 0.09 | 6.8 | 93.2 | 0.0 | -0.59 | 0.44 | 0.79 | 0.85 | 2.66 | 24197 | 2978 | 12 | 61 | 0 | 0 | 0 | logfile |
✔ | 7D20 | 30552 | 2022-04-05 | 2020-09-15 | 3.0 | 3.72 | — | 3.6 | 0.009 | 0.81 | 0.0 | 0.06 | 28.76 | 0.00 | 1.752 | 12.74 | 0.00 | 5.2 | 94.8 | 0.0 | -3.29 | 0.78 | 0.79 | 2.68 | 3.6 | 0.003 | 0.68 | 0.0 | 0.05 | 28.36 | 0.00 | 2.157 | 10.19 | 1.46 | 3.1 | 96.9 | 0.0 | 1.71 | 0.57 | 0.72 | 0.70 | 2.37 | 12836 | 914 | 11 | 272 | 0 | 0 | 0 | logfile |
✔ | 7JZW | 22582 | 2022-04-07 | 2020-09-02 | 3.2 | 2.44 | — | 3.2 | 0.010 | 0.97 | 0.0 | 0.05 | 16.21 | 0.01 | 2.237 | 5.94 | 0.13 | 6.9 | 93.0 | 0.0 | -3.86 | 0.85 | 0.84 | 3.35 | 3.2 | 0.004 | 0.68 | 0.0 | 0.04 | 16.97 | 0.00 | 2.087 | 10.98 | 0.13 | 5.4 | 94.6 | 0.0 | -0.24 | 0.41 | 0.85 | 0.85 | 2.43 | 24266 | 2986 | 11 | 61 | 0 | 0 | 0 | logfile |
✔ | 7CZB | 30508 | 2022-04-04 | 2020-09-07 | 3.8 | 4.14 | — | 4.1 | 0.005 | 1.12 | 0.0 | 0.06 | 15.72 | 0.01 | 2.360 | 4.78 | 0.47 | 12.5 | 87.5 | 0.0 | -4.95 | 0.56 | 0.80 | 2.30 | 4.1 | 0.003 | 0.91 | 0.0 | 0.05 | 17.03 | 0.00 | 2.245 | 10.91 | 0.94 | 10.8 | 89.2 | 0.0 | -1.60 | 1.39 | 0.56 | 0.80 | 1.78 | 6304 | 776 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 6UGH | 20764 | 2022-04-05 | 2019-09-26 | 3.4 | 3.33 | — | 3.4 | 0.009 | 0.90 | 0.0 | 0.05 | 13.50 | 0.01 | 2.024 | 3.21 | 0.13 | 3.3 | 96.4 | 0.3 | -2.50 | 0.53 | 0.74 | 2.98 | 3.4 | 0.003 | 0.61 | 0.0 | 0.04 | 15.72 | 0.00 | 2.025 | 8.40 | 0.80 | 4.0 | 95.9 | 0.1 | -0.85 | 1.10 | 0.54 | 0.77 | 2.42 | 13690 | 895 | 2 | 0 | 0 | 0 | 6716 | logfile |
✔ | 7BTW | 30189 | 2022-04-05 | 2020-04-03 | 2.9 | 3.04 | — | 3.1 | 0.008 | 1.12 | 3.0 | 0.06 | 18.16 | 0.01 | 1.556 | 6.99 | 9.60 | 8.0 | 91.6 | 0.4 | -5.22 | 0.65 | 0.76 | 3.14 | 3.1 | 0.006 | 0.82 | 0.0 | 0.05 | 18.23 | 0.01 | 2.075 | 11.09 | 3.40 | 8.5 | 91.4 | 0.1 | -1.74 | 0.75 | 0.66 | 0.80 | 2.94 | 10246 | 1280 | 4 | 0 | 0 | 0 | 0 | logfile |