The table shows a selection of parameters. Activate more columns using
the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 8Q7P | 18228 | 2023-09-27 | 2023-08-16 | 3.28 | 3.24 | 3.20 | 3.3 | 0.011 | 1.82 | 0.0 | 0.09 | 11.62 | 0.01 | 2.479 | 0.00 | 0.00 | 1.4 | 98.6 | 0.0 | -1.91 | 0.36 | 0.78 | 5.16 | 3.3 | 0.006 | 0.69 | 0.0 | 0.05 | 16.90 | 0.00 | 2.209 | 7.08 | 1.79 | 1.6 | 98.4 | 0.0 | -2.12 | 1.47 | 0.42 | 0.87 | 5.25 | 3402 | 450 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 8FY4 | 29552 | 2023-09-28 | 2023-01-25 | 2.57 | 2.06 | 2.58 | 2.8 | 0.003 | 0.57 | 0.0 | 0.04 | 14.87 | 0.00 | 2.189 | 8.90 | 1.87 | 1.8 | 98.2 | 0.0 | 2.42 | 0.63 | 0.62 | 1.36 | 1.9 | 0.004 | 0.62 | 0.0 | 0.04 | 17.27 | 0.00 | 2.192 | 10.61 | 2.22 | 2.9 | 97.1 | 0.0 | 1.81 | 1.18 | 0.79 | 0.79 | 2.91 | 7800 | 989 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 8Q88 | 18249 | 2023-09-27 | 2023-08-18 | 2.95 | 2.99 | 2.96 | 3.1 | 0.011 | 1.82 | 1.0 | 0.09 | 9.88 | 0.01 | 2.489 | 0.85 | 0.25 | 4.3 | 95.7 | 0.0 | -1.51 | 0.41 | 0.83 | 6.19 | 3.1 | 0.003 | 0.70 | 0.0 | 0.05 | 13.61 | 0.00 | 2.296 | 6.79 | 1.26 | 2.0 | 98.0 | 0.0 | -2.37 | 1.34 | 0.40 | 0.87 | 5.10 | 3468 | 456 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 8CE1 | 16597 | 2023-09-30 | 2023-02-01 | 3.47 | 3.70 | 3.42 | 3.7 | 0.006 | 1.08 | 0.0 | 0.06 | 15.03 | 0.01 | 2.189 | 6.45 | 0.42 | 2.7 | 97.2 | 0.1 | -0.68 | 0.66 | 0.82 | 2.33 | 3.7 | 0.003 | 0.66 | 0.0 | 0.04 | 16.02 | 0.01 | 2.228 | 7.87 | 0.00 | 2.4 | 97.6 | 0.0 | 1.76 | 0.99 | 0.72 | 0.87 | 1.98 | 11438 | 1462 | 8 | 0 | 0 | 0 | 0 | logfile |
✔ | 8G2V | 29682 | 2023-09-27 | 2023-02-06 | 2.715 | 2.36 | 2.41 | 3.0 | 0.005 | 0.64 | 0.0 | 0.06 | 16.26 | 0.00 | 2.486 | 8.31 | 0.00 | 5.3 | 94.7 | 0.0 | -3.75 | 0.45 | 0.81 | 7.19 | 2.8 | 0.003 | 0.68 | 0.0 | 0.06 | 17.30 | 0.00 | 2.330 | 18.40 | 1.67 | 2.6 | 97.4 | 0.0 | -3.25 | 2.56 | 0.43 | 0.83 | 7.86 | 1660 | 210 | 10 | 0 | 0 | 0 | 0 | logfile |
✔ | 7Y5W | 33627 | 2023-09-29 | 2022-06-17 | 3.5 | 4.54 | 3.56 | 3.7 | 0.003 | 0.53 | 0.0 | 0.03 | 27.68 | 0.00 | 2.102 | 12.41 | 0.00 | 2.0 | 98.0 | 0.0 | 2.53 | 0.81 | 0.70 | 0.94 | 3.7 | 0.005 | 0.89 | 0.0 | 0.04 | 28.98 | 0.01 | 2.069 | 23.02 | 0.40 | 2.0 | 98.0 | 0.0 | 0.85 | 0.95 | 0.90 | 0.85 | 0.98 | 8811 | 579 | 10 | 202 | 0 | 0 | 0 | logfile |
✔ | 8Q9F | 18279 | 2023-09-28 | 2023-08-20 | 1.91 | 1.89 | 1.88 | 1.9 | 0.011 | 1.78 | 0.0 | 0.09 | 10.30 | 0.01 | 2.515 | 0.00 | 0.00 | 0.2 | 99.8 | 0.0 | -2.15 | 0.31 | 0.73 | 7.64 | 1.9 | 0.003 | 0.64 | 0.0 | 0.05 | 15.99 | 0.00 | 2.249 | 3.13 | 0.00 | 2.5 | 97.5 | 0.0 | -2.11 | 1.84 | 0.44 | 0.86 | 7.01 | 6390 | 414 | 6 | 0 | 0 | 0 | 3258 | logfile |
✔ | 8GAQ | 29904 | 2023-09-28 | 2023-02-23 | 3.73 | 4.01 | 3.78 | 4.0 | 0.005 | 0.70 | 0.0 | 0.04 | 16.74 | 0.00 | 2.278 | 5.61 | 0.15 | 1.7 | 98.3 | 0.0 | -3.14 | 0.69 | 0.78 | 2.28 | 4.0 | 0.004 | 0.75 | 0.0 | 0.04 | 17.55 | 0.00 | 2.229 | 10.32 | 0.15 | 2.1 | 97.9 | 0.0 | -0.16 | 1.18 | 0.69 | 0.79 | 1.19 | 5825 | 735 | 5 | 0 | 0 | 0 | 0 | logfile |
✔ | 7EEi | 31077 | 2023-09-29 | 2021-03-18 | 3.6 | 3.44 | — | 3.4 | 0.006 | 1.09 | 0.0 | 0.06 | 13.71 | 0.01 | 1.975 | 5.03 | 0.00 | 0.1 | 99.9 | 0.0 | -1.90 | 0.77 | 0.77 | 1.99 | 3.4 | 0.003 | 0.65 | 0.0 | 0.04 | 15.23 | 0.00 | 2.159 | 7.84 | 0.12 | 5.2 | 94.8 | 0.0 | -0.01 | 1.24 | 0.80 | 0.80 | 2.19 | 9825 | 1400 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 8Q7L | 18219 | 2023-09-27 | 2023-08-16 | 2.82 | 2.80 | 2.86 | 2.9 | 0.011 | 1.90 | 4.0 | 0.11 | 11.68 | 0.01 | 2.159 | 2.03 | 0.00 | 4.4 | 95.6 | 0.0 | -2.15 | 0.34 | 0.80 | 5.45 | 2.9 | 0.003 | 0.67 | 0.0 | 0.05 | 17.48 | 0.00 | 2.272 | 4.65 | 0.78 | 1.6 | 98.4 | 0.0 | -2.24 | 0.89 | 0.39 | 0.90 | 5.38 | 3375 | 441 | 6 | 0 | 0 | 0 | 0 | logfile |
✔ | 8CPE | 16780 | 2023-09-28 | 2023-03-02 | 4.0 | 3.90 | 2.90 | 4.2 | 0.002 | 0.93 | 0.0 | 0.06 | 12.17 | 0.00 | 2.224 | 3.26 | 0.00 | 4.1 | 95.9 | 0.0 | -3.80 | 0.54 | 0.71 | — | 4.3 | 0.003 | 0.71 | 0.0 | 0.05 | 14.44 | 0.00 | 2.166 | 10.52 | 0.00 | 11.2 | 88.8 | 0.0 | -4.96 | 1.92 | 0.56 | 0.75 | — | 5520 | 385 | 5 | 0 | 0 | 0 | 2615 | logfile |
✔ | 8Q7T | 18233 | 2023-09-30 | 2023-08-17 | 3.0 | 2.38 | 2.99 | 3.1 | 0.011 | 1.80 | 0.0 | 0.09 | 12.35 | 0.01 | 2.480 | 0.10 | 0.18 | 2.4 | 97.6 | 0.0 | -1.65 | 0.27 | 0.65 | 4.83 | 3.0 | 0.003 | 0.57 | 0.0 | 0.05 | 16.68 | 0.00 | 2.070 | 5.56 | 2.29 | 2.7 | 97.3 | 0.0 | -1.43 | 1.53 | 0.33 | 0.82 | 4.46 | 10083 | 654 | 9 | 0 | 0 | 0 | 5136 | logfile |
✔ | 8JW4 | 36679 | 2023-09-29 | 2023-06-28 | 3.13 | 3.85 | 3.39 | 3.8 | 0.005 | 0.76 | 0.0 | 0.05 | 9.53 | 0.00 | 2.214 | 2.01 | 0.28 | 8.2 | 91.8 | 0.0 | -4.11 | 0.63 | 0.70 | 2.66 | 3.7 | 0.003 | 0.66 | 0.0 | 0.04 | 14.13 | 0.00 | 2.179 | 5.92 | 0.19 | 5.7 | 94.3 | 0.0 | -1.07 | 1.35 | 0.63 | 0.73 | 0.99 | 9582 | 1191 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 8EAY | 27990 | 2023-09-29 | 2022-08-30 | 3.33 | 3.56 | 3.21 | 3.6 | 0.008 | 1.14 | 4.0 | 0.09 | 14.18 | 0.01 | 2.243 | 5.38 | 0.76 | 9.5 | 90.1 | 0.3 | -2.33 | 0.58 | 0.63 | 1.83 | 3.6 | 0.003 | 0.61 | 0.0 | 0.04 | 15.33 | 0.00 | 2.044 | 7.48 | 0.57 | 9.5 | 90.3 | 0.2 | -2.01 | 1.21 | 0.62 | 0.71 | 2.17 | 9479 | 626 | 3 | 0 | 0 | 0 | 4718 | logfile |
✔ | 7YUF | 34105 | 2023-09-29 | 2022-08-17 | 3.29 | 3.54 | 3.31 | 3.7 | 0.006 | 0.80 | 0.0 | 0.05 | 12.37 | 0.01 | 2.232 | 1.74 | 0.00 | 3.8 | 96.2 | 0.0 | -0.26 | 0.57 | 0.73 | 2.51 | 3.6 | 0.004 | 0.64 | 0.0 | 0.04 | 14.88 | 0.00 | 2.223 | 5.45 | 0.33 | 4.1 | 95.9 | 0.0 | 1.07 | 0.63 | 0.61 | 0.80 | 1.30 | 8415 | 1105 | 5 | 0 | 0 | 0 | 0 | logfile |
✔ | 7XF5 | 33169 | 2023-09-29 | 2022-04-01 | 3.9 | 3.53 | 3.33 | 3.5 | 0.003 | 0.61 | 0.0 | 0.04 | 14.14 | 0.00 | 2.222 | 8.54 | 0.58 | 2.3 | 97.6 | 0.1 | 1.11 | 0.51 | 0.67 | 1.39 | 3.5 | 0.003 | 0.65 | 0.0 | 0.04 | 16.47 | 0.00 | 2.260 | 10.54 | 0.49 | 3.4 | 96.6 | 0.0 | 1.72 | 2.28 | 0.55 | 0.72 | 1.40 | 9640 | 1239 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 8Q9K | 18284 | 2023-09-28 | 2023-08-20 | 3.2 | 3.24 | 3.02 | 3.3 | 0.011 | 2.00 | 0.0 | 0.09 | 9.09 | 0.01 | 2.527 | 0.79 | 0.00 | 5.1 | 94.9 | 0.0 | -1.94 | 0.39 | 0.82 | 6.44 | 3.2 | 0.003 | 0.57 | 0.0 | 0.05 | 14.49 | 0.00 | 2.134 | 4.92 | 0.56 | 3.5 | 96.5 | 0.0 | -1.36 | 2.69 | 0.35 | 0.84 | 5.27 | 6306 | 408 | 6 | 0 | 0 | 0 | 3216 | logfile |
✔ | 8Q9o | 18287 | 2023-09-28 | 2023-08-20 | 3.1 | 3.14 | 2.95 | 3.1 | 0.012 | 1.87 | 0.0 | 0.09 | 11.25 | 0.01 | 2.518 | 0.28 | 3.03 | 3.0 | 97.0 | 0.0 | -1.40 | 0.32 | 0.80 | 5.39 | 3.1 | 0.003 | 0.59 | 0.0 | 0.05 | 13.90 | 0.00 | 2.051 | 4.41 | 0.25 | 2.7 | 97.3 | 0.0 | -1.16 | 3.55 | 0.32 | 0.81 | 5.30 | 7032 | 450 | 6 | 0 | 0 | 0 | 3588 | logfile |
✔ | 7RNX | 24582 | 2023-09-28 | 2021-07-30 | 3.42 | 3.46 | — | 3.4 | 0.013 | 1.07 | 0.0 | 0.06 | 14.18 | 0.01 | 2.266 | 4.77 | 0.44 | 5.2 | 94.8 | 0.0 | -4.11 | 0.69 | 0.84 | 1.92 | 3.5 | 0.003 | 0.60 | 0.0 | 0.04 | 15.22 | 0.00 | 2.200 | 9.25 | 0.29 | 3.6 | 96.4 | 0.0 | 1.31 | 0.39 | 0.68 | 0.85 | 1.94 | 6758 | 900 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 6XYE | 10649 | 2023-09-29 | 2020-01-30 | 4.3 | 4.37 | 4.28 | 4.3 | 0.010 | 1.29 | 0.0 | 0.09 | 10.03 | 0.01 | 2.315 | 11.42 | 0.00 | 4.7 | 95.3 | 0.0 | -3.09 | 0.71 | 0.69 | — | 4.3 | 0.004 | 0.76 | 0.0 | 0.05 | 12.39 | 0.00 | 2.150 | 16.05 | 0.00 | 8.4 | 91.6 | 0.0 | -1.52 | 1.71 | 0.72 | 0.70 | — | 9834 | 1293 | 6 | 0 | 0 | 0 | 0 | logfile |