The table shows a selection of parameters. Activate more columns using
the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 8P34 | 17383 | 2023-12-07 | 2023-05-17 | 2.61 | 2.80 | 2.24 | 2.8 | 0.009 | 1.32 | 0.0 | 0.08 | 11.05 | 0.01 | 2.651 | 0.69 | 0.00 | 5.4 | 94.6 | 0.0 | -1.84 | 0.29 | 0.90 | 7.34 | 2.8 | 0.002 | 0.50 | 0.0 | 0.05 | 13.21 | 0.00 | 2.693 | 0.69 | 0.00 | 4.3 | 95.7 | 0.0 | -1.63 | 0.36 | 0.28 | 0.88 | 6.21 | 711 | 94 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 5M6S | 3451 | 2023-12-07 | 2016-10-25 | 4.8 | 5.27 | — | 6.5 | 0.005 | 0.84 | 0.0 | 0.04 | 27.97 | 0.00 | 2.447 | 23.24 | 44.05 | 7.3 | 89.6 | 3.1 | -5.37 | 0.01 | 0.04 | — | 5.6 | 0.003 | 0.67 | 0.0 | 0.03 | 18.96 | 0.00 | 1.968 | 10.05 | 0.00 | 6.2 | 93.8 | 0.0 | 2.46 | 2.56 | 0.02 | 0.06 | — | 1593 | 98 | 1 | 0 | 0 | 0 | 793 | logfile |
✔ | 7QKZ | 14058 | 2023-12-07 | 2021-12-19 | 2.65 | 2.79 | 2.28 | 3.2 | 0.013 | 2.86 | 9.0 | 0.34 | 18.75 | 0.02 | 2.498 | 0.59 | 0.00 | 9.9 | 90.1 | 0.0 | -1.61 | 0.34 | 0.61 | 7.02 | 3.3 | 0.006 | 1.51 | 0.0 | 0.38 | 18.97 | 0.01 | 2.249 | 14.18 | 0.00 | 1.2 | 98.8 | 0.0 | -0.83 | 5.07 | 0.34 | 0.64 | 6.93 | 1701 | 99 | 9 | 0 | 0 | 0 | 891 | logfile |
✔ | 7X34 | 32978 | 2023-12-07 | 2022-02-27 | 3.1 | 5.47 | 3.73 | 3.1 | 0.009 | 1.17 | 0.0 | 0.05 | 23.93 | 0.01 | 2.316 | 5.71 | 0.00 | 3.1 | 96.9 | 0.0 | -2.86 | 0.21 | 0.78 | 1.18 | 3.2 | 0.005 | 0.86 | 0.0 | 0.04 | 24.93 | 0.01 | 2.062 | 38.64 | 0.00 | 4.1 | 95.9 | 0.0 | 0.11 | 0.73 | 0.21 | 0.78 | 1.18 | 2762 | 100 | 2 | 94 | 0 | 0 | 0 | logfile |
✔ | 6QJP | 4565 | 2023-12-07 | 2019-01-24 | 3.5 | 3.64 | 2.32 | 4.1 | 0.009 | 1.01 | 0.0 | 0.07 | 9.52 | 0.01 | 2.605 | 1.16 | 0.00 | 3.2 | 96.8 | 0.0 | -2.50 | 0.37 | 0.74 | 3.05 | 4.2 | 0.004 | 0.77 | 0.0 | 0.05 | 12.80 | 0.00 | 2.338 | 11.00 | 0.00 | 4.3 | 95.7 | 0.0 | -3.48 | 1.60 | 0.32 | 0.73 | 4.73 | 816 | 105 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 6QJM | 4564 | 2023-12-07 | 2019-01-24 | 3.3 | 3.49 | 1.95 | 3.4 | 0.010 | 1.01 | 0.0 | 0.07 | 8.06 | 0.01 | 2.408 | 6.17 | 0.00 | 9.1 | 90.9 | 0.0 | -2.36 | 0.38 | 0.76 | 3.31 | 3.5 | 0.003 | 0.57 | 0.0 | 0.05 | 13.66 | 0.00 | 2.146 | 4.49 | 0.00 | 5.1 | 94.9 | 0.0 | -2.42 | 1.59 | 0.33 | 0.73 | 2.58 | 846 | 111 | 3 | 0 | 0 | 0 | 0 | logfile |
✔ | 7Uo5 | 26640 | 2023-12-10 | 2022-04-12 | 3.1 | 3.62 | 3.02 | 3.0 | 0.015 | 2.22 | 0.0 | 0.12 | 31.27 | 0.06 | 2.328 | 2.33 | 1.02 | 6.4 | 92.7 | 0.9 | -2.73 | 0.80 | 0.60 | 3.19 | 3.0 | 0.005 | 0.80 | 0.0 | 0.05 | 30.08 | 0.01 | 1.805 | 32.59 | 0.00 | 13.6 | 85.5 | 0.9 | -3.62 | 1.53 | 0.81 | 0.66 | 1.71 | 13979 | 112 | 2 | 373 | 7 | 0 | 5024 | logfile |
✔ | 7Uo0 | 26636 | 2023-12-09 | 2022-04-12 | 3.4 | 4.47 | — | 3.5 | 0.003 | 2.23 | 0.0 | 0.11 | 29.51 | 0.00 | 2.117 | 7.29 | 2.04 | 6.4 | 93.6 | 0.0 | -0.20 | 0.73 | 0.34 | 1.64 | 3.5 | 0.005 | 0.96 | 0.0 | 0.05 | 30.60 | 0.01 | 2.095 | 29.77 | 0.00 | 10.0 | 90.0 | 0.0 | -3.66 | 5.13 | 0.84 | 0.63 | 1.93 | 10697 | 112 | 4 | 455 | 7 | 0 | 0 | logfile |
✔ | 7Uo2 | 26638 | 2023-12-08 | 2022-04-12 | 3.1 | 3.75 | — | 3.0 | 0.002 | 0.55 | 0.0 | 0.03 | 25.92 | 0.00 | 2.033 | 10.61 | 2.04 | 14.5 | 83.6 | 1.8 | -3.16 | 0.85 | 0.73 | 1.50 | 2.9 | 0.008 | 1.02 | 0.0 | 0.05 | 26.88 | 0.01 | 1.813 | 35.32 | 2.04 | 19.1 | 80.9 | 0.0 | -2.86 | 0.75 | 0.87 | 0.81 | 1.74 | 6735 | 112 | 2 | 271 | 3 | 0 | 0 | logfile |
✔ | 6RJU | 4906 | 2023-12-07 | 2019-04-29 | 3.2 | 4.49 | 2.14 | 10.0 | 0.007 | 0.93 | 0.0 | 0.05 | 15.36 | 0.00 | 2.423 | 4.52 | 0.00 | 11.6 | 88.4 | 0.0 | -7.10 | 0.22 | -0.01 | -0.80 | 3.9 | 0.003 | 0.71 | 0.0 | 0.03 | 16.08 | 0.00 | 2.061 | 8.55 | 1.01 | 6.2 | 93.8 | 0.0 | -1.13 | 1.35 | 0.28 | 0.06 | -0.23 | 1992 | 131 | 1 | 0 | 0 | 0 | 997 | logfile |
✔ | 5M5H | 4155 | 2023-12-07 | 2016-10-21 | 4.5 | 2.29 | — | 2.2 | 0.007 | 1.50 | 0.0 | 0.08 | 12.37 | 0.01 | 2.186 | 39.89 | 0.00 | 8.7 | 88.9 | 2.4 | -5.94 | 0.14 | 0.14 | — | 2.1 | 0.004 | 0.89 | 0.0 | 0.05 | 12.67 | 0.01 | 2.275 | 23.84 | 0.00 | 8.7 | 91.3 | 0.0 | -1.45 | 2.20 | 0.15 | 0.14 | — | 1086 | 132 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 8G8E | 29846 | 2023-12-07 | 2023-02-17 | 4.2 | 7.38 | 5.01 | 5.9 | 0.004 | 0.73 | 0.0 | 0.04 | 28.39 | 0.00 | 2.277 | 15.90 | 0.79 | 1.5 | 98.5 | 0.0 | 0.35 | 0.81 | 0.66 | — | 6.0 | 0.004 | 0.67 | 0.0 | 0.03 | 28.04 | 0.00 | 2.216 | 17.94 | 0.00 | 3.7 | 96.3 | 0.0 | -0.81 | 1.85 | 0.91 | 0.85 | — | 2464 | 140 | 3 | 64 | 0 | 0 | 0 | logfile |
✔ | 7US9 | 26729 | 2023-12-07 | 2022-04-23 | 3.8 | 3.84 | 3.64 | 3.9 | 0.015 | 1.58 | 0.0 | 0.11 | 7.49 | 0.01 | 2.489 | 3.45 | 0.00 | 2.3 | 97.7 | 0.0 | 1.07 | 0.59 | 0.74 | 4.43 | 3.8 | 0.004 | 0.80 | 0.0 | 0.05 | 12.03 | 0.01 | 2.421 | 8.38 | 0.00 | 3.9 | 96.1 | 0.0 | -0.01 | 1.69 | 0.60 | 0.78 | 3.15 | 1127 | 145 | 3 | 0 | 4 | 0 | 0 | logfile |
✔ | 8A06 | 15051 | 2023-12-07 | 2022-05-26 | 4.0 | 3.63 | 3.78 | 3.8 | 0.003 | 0.56 | 0.0 | 0.05 | 13.75 | 0.00 | 2.201 | 6.79 | 0.73 | 2.8 | 97.2 | 0.0 | -0.86 | 0.27 | 0.78 | — | 3.7 | 0.004 | 0.65 | 0.0 | 0.05 | 17.25 | 0.00 | 2.290 | 6.79 | 0.00 | 4.8 | 95.2 | 0.0 | -1.23 | 0.40 | 0.27 | 0.80 | — | 1185 | 147 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 8FF3 | 29037 | 2023-12-07 | 2022-12-07 | 3.09 | 2.31 | 2.69 | 3.2 | 0.002 | 0.43 | 0.0 | 0.06 | 8.70 | 0.00 | 2.616 | 1.83 | 0.00 | 0.0 | 100.0 | 0.0 | -2.15 | 0.40 | 0.67 | 4.94 | 3.2 | 0.002 | 0.49 | 0.0 | 0.05 | 11.42 | 0.00 | 2.240 | 6.87 | 0.00 | 1.4 | 98.6 | 0.0 | -2.14 | 0.47 | 0.36 | 0.72 | 4.33 | 2190 | 150 | 6 | 0 | 0 | 0 | 1122 | logfile |
✔ | 7QL2 | 14061 | 2023-12-07 | 2021-12-19 | 2.95 | 2.96 | 2.65 | 3.1 | 0.010 | 2.11 | 2.0 | 0.11 | 10.98 | 0.01 | 2.674 | 0.00 | 0.00 | 7.6 | 92.4 | 0.0 | -2.82 | 0.30 | 0.74 | 4.50 | 3.4 | 0.003 | 0.56 | 0.0 | 0.05 | 12.48 | 0.00 | 2.544 | 1.75 | 1.48 | 8.3 | 91.7 | 0.0 | -3.02 | 0.82 | 0.22 | 0.71 | 4.19 | 2286 | 150 | 3 | 0 | 0 | 0 | 1179 | logfile |
✔ | 5LiJ | 4054 | 2023-12-07 | 2016-07-14 | 4.2 | 3.63 | — | 4.2 | 0.009 | 2.92 | 4.0 | 0.17 | 15.82 | 0.01 | 2.249 | 25.64 | 0.00 | 10.7 | 89.3 | 0.0 | -6.36 | 0.85 | 0.76 | — | 3.8 | 0.005 | 1.18 | 0.0 | 0.04 | 10.31 | 0.00 | 2.148 | 15.12 | 0.00 | 32.0 | 68.0 | 0.0 | -5.66 | 1.48 | 0.86 | 0.78 | — | 761 | 152 | 1 | 0 | 0 | 0 | 0 | logfile |
✔ | 6VHL | 21207 | 2023-12-07 | 2020-01-10 | 3.3 | 3.60 | — | 3.5 | 0.007 | 1.03 | 0.0 | 0.07 | 15.85 | 0.01 | 1.791 | 14.51 | 4.48 | 14.7 | 85.3 | 0.0 | -6.30 | 0.26 | 0.70 | 3.54 | 3.8 | 0.003 | 0.76 | 0.0 | 0.04 | 16.24 | 0.00 | 2.321 | 8.71 | 0.00 | 8.7 | 91.3 | 0.0 | -3.58 | 2.81 | 0.26 | 0.69 | 3.41 | 1190 | 158 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 8oLQ | 16961 | 2023-12-07 | 2023-03-30 | 4.0 | 3.17 | 3.52 | 3.7 | 0.003 | 0.49 | 0.0 | 0.05 | 7.64 | 0.00 | 2.207 | 3.69 | 0.00 | 0.0 | 100.0 | 0.0 | -0.52 | 0.25 | 0.70 | — | 3.6 | 0.002 | 0.45 | 0.0 | 0.05 | 13.95 | 0.00 | 2.206 | 8.61 | 3.20 | 6.0 | 94.0 | 0.0 | -1.52 | 1.10 | 0.24 | 0.71 | — | 2445 | 160 | 5 | 0 | 0 | 0 | 1185 | logfile |
✔ | 7BC5 | 12139 | 2023-12-07 | 2020-12-18 | 3.1 | 3.06 | 3.11 | 3.1 | 0.005 | 1.05 | 0.0 | 0.05 | 15.92 | 0.01 | 2.314 | 7.83 | 0.76 | 8.2 | 91.8 | 0.0 | -5.64 | 0.23 | 0.62 | 0.92 | 3.0 | 0.003 | 0.72 | 0.0 | 0.04 | 17.04 | 0.00 | 2.243 | 14.42 | 0.76 | 7.5 | 92.5 | 0.0 | -2.75 | 1.30 | 0.23 | 0.58 | 0.92 | 1200 | 161 | 1 | 0 | 0 | 0 | 0 | logfile |